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949 commits

Author SHA1 Message Date
Fabian Joswig
59137785ed feat: _asser_equal_properties improved by removing one for loop 2022-01-19 13:18:44 +00:00
Fabian Joswig
c3ba07280b feat: When initializing 1d correlators it is now checked whether all obs 
are defined on the same ensembles.
 2022-01-19 11:03:45 +00:00
Fabian Joswig
78ff4bb117 refactor: moved _assert_equal_properties from input.json to misc 2022-01-19 10:55:51 +00:00
Fabian Joswig
9b52a9a615 feat!: dump methods now export to the json.gz format by default. Pickle 
format can be chosen via parameter.
 2022-01-19 10:43:18 +00:00
Fabian Joswig
59eb1ee546 fix: skew and kurtosis now correctly calculated for non regular data in 
Obs.plot_history
 2022-01-18 18:08:55 +00:00
Fabian Joswig
a63e9958c4 refactor: Exception corrected in Corr.GEVP, private methods renamed, 
docstrings extended
 2022-01-18 16:50:07 +00:00
JanNeuendorf
677f1655a9 tests again 2022-01-18 17:06:39 +01:00
JanNeuendorf
2342c51869 linter things 2022-01-18 16:53:00 +01:00
JanNeuendorf
05f5720876 Merge branch 'develop' of https://github.com/JanNeuendorf/pyerrors into develop 2022-01-18 16:48:11 +01:00
JanNeuendorf
909ef85ff8 linting tested again 2022-01-18 16:46:14 +01:00
JanNeuendorf
5244e34d9e
Merge branch 'develop' into develop 2022-01-18 16:21:59 +01:00
JanNeuendorf
2f11d0d30b The changes i tried to push before 2022-01-18 16:16:54 +01:00
Fabian Joswig
c17ebc4cb3 docs: docstring added to Corr.__init__, comments cleaned up 2022-01-18 15:04:11 +00:00
Fabian Joswig
d778a3b238 feat!: merged the parameters padding_front and padding_back of Corr into 
one parameter padding
 2022-01-18 14:50:18 +00:00
Fabian Joswig
56fe126593 docs: docstrings of input/json module updated 2022-01-18 14:31:09 +00:00
JanNeuendorf
39f176585e
Merge branch 'fjosw:develop' into develop 2022-01-18 13:21:01 +01:00
Fabian Joswig
f282ecdaf6 feat: json import export for correlator class implemented, tests added 2022-01-18 12:13:20 +00:00
Fabian Joswig
268f71fa19 feat: precision of printed p-values in Obs.plot_history increased 2022-01-17 14:56:33 +00:00
Fabian Joswig
0918330f13 feat: p-values added to skew and kurtosis in Obs.plot_history 2022-01-17 14:55:14 +00:00
Fabian Joswig
4f3b2d22d5 feat: skew and kurtosis added to Obs.plot_history 2022-01-17 14:45:54 +00:00
Fabian Joswig
bb3a15d69b docs: docstring added to check_idl in input/utils 2022-01-16 16:56:53 +01:00
Fabian Joswig
5993f1a4ba refactor: comments removed in input/openQCD, typo corrected 2022-01-16 16:53:57 +01:00
Fabian Joswig
f8cbaef626 refactor: unnecessary comments in input/sfcf removed, typos corrected 2022-01-16 16:50:51 +01:00
Fabian Joswig
c76e8b8bad
Merge pull request #32 from jkuhl-uni/feature/input_2.0 
Feature/input 2.0
 2022-01-16 16:43:55 +01:00
jkuhl-uni
dc6b844fa4 flake8 compliance without E501of utils.py 2022-01-14 21:12:08 +01:00
jkuhl-uni
62cb0ab1bb flake8 compliance without E501 2022-01-14 21:06:41 +01:00
jkuhl-uni
5f156e4821 flake8 compliance openQCD.py 2022-01-14 16:47:34 +01:00
jkuhl-uni
302a7ae439 flake8 compliance 2022-01-14 16:00:40 +01:00
Fabian Joswig
5cb3291168 feat: Automated Kolmogorov Smirnov test for fit p-values added 2022-01-10 15:17:55 +01:00
Fabian Joswig
5b831ec250 feat: p-value calculation added to fit functions and fit result object 2022-01-10 15:00:47 +01:00
jkuhl-uni
53f727092d small bug fix enabling older versions of python 2022-01-10 11:45:42 +01:00
Fabian Joswig
88572c06a8 fix: DeprecationWarning in Corr.reweighted fixed 2022-01-07 12:08:27 +01:00
Fabian Joswig
f9584e2372 fix: end of x_range in Corr.show shortened by 1 2022-01-06 17:44:41 +01:00
Fabian Joswig
82aa305dc1 fix: removed endpoints in axhline in fits.residual_plot 2022-01-06 11:56:38 +01:00
Fabian Joswig
5d0d56596f refactor: redundant tree parameter removed from 
input/hadrons/read_meson_hd5
 2022-01-05 20:08:08 +01:00
jkuhl-uni
ebdc17aa66 implemented read_sfcf for append-mode output, bug fixes 2022-01-03 21:34:04 +01:00
jkuhl-uni
31c2ada963 corrected small error in init 2022-01-03 14:46:19 +01:00
jkuhl-uni
b8b1d36125 small bug fixes after first pull request 2022-01-03 14:41:14 +01:00
jkuhl-uni
76b7f159aa read_qtop now also hands over idl of the result Obs 2022-01-03 14:40:12 +01:00
jkuhl-uni
01ada964b2 added read_qtop_sector method outsourcing funtionality of former 'full' key 2022-01-03 11:20:25 +01:00
Fabian Joswig
773fd8e4c5 docs: documentation of Corr objects added 2021-12-23 16:42:53 +01:00
JanNeuendorf
145a211bd0
Some more changes to corr 
- GEVP method can return lists of eigenvector by solving the GEVP at multiple timeslices. The ordering is done according to arXiv:2004.10472 [hep-lat] 
- The projection method can deal with those lists 
- Constructor for Hankel matrix from a single corr 
- typechecks allow for complex-content 
- .real and .imag work on corrs
- But everything else with CObs does not yet work.
 2021-12-23 15:23:59 +01:00
Fabian Joswig
8d8fa82bbe feat: Path can now be specified in Corr.dump 2021-12-23 14:42:57 +01:00
Fabian Joswig
b8c26fd41d refactor: unnecessary code in scalar_mat_op removed 2021-12-23 14:26:17 +01:00
Fabian Joswig
1ba7566a62 refactor!: Code for numerical differentation of linalg operations 
removed
 2021-12-23 14:19:24 +01:00
Fabian Joswig
b7da7f4b7e refactor: unnecessary overloading of np.sinc removed, tests added 2021-12-23 12:29:42 +01:00
Fabian Joswig
64a8bc690f refactor!: Obs.print method removed 2021-12-23 12:21:40 +01:00
Fabian Joswig
c8cb0e4cb8 feat: epsilon tensors moved to dirac submodule, tests added 2021-12-23 12:00:10 +01:00
Fabian Joswig
b50346dcf3 feat: rank4 epsilon tensor added 2021-12-21 20:42:56 +01:00
Fabian Joswig
bc220fceaf fix: get_item and reweighted now work with padded correlators. 2021-12-20 11:35:04 +01:00