77 commits

Author	SHA1	Message	Date
fjosw	b1774646f4	Merge branch 'develop' into documentation	2024-09-13 06:35:25 +00:00
Pia Leonie Jones Petrak	1d6f7f65c0	Feature/corr matrix and inverse cov matrix as input in least squares function for correlated fits (#223) ... * feat: corr_matrix kwargs as input for least squares fit * feat/tests: inverse covariance matrix and correlation matrix kwargs as input for least squares function * feat/tests/example: reduced new kwargs to 'inv_chol_cov_matrix' and outsourced the inversion & cholesky decomposition of the covariance matrix (function 'invert_corr_cov_cholesky(corr, covdiag)') * tests: added tests for inv_chol_cov_matrix kwarg for the case of combined fits * fix: renamed covdiag to inverrdiag needed for the cholesky decomposition and corrected its documentation * examples: added an example of a correlated combined fit to the least_squares documentation * feat/tests/fix(of typos): added function 'sort_corr()' (and a test of it) to sort correlation matrix according to a list of alphabetically sorted keys * docs: added more elaborate documentation/example of sort_corr(), fixed typos in documentation of invert_corr_cov_cholesky()	2024-09-13 08:35:10 +02:00
fjosw	66ebbd2669	Merge branch 'develop' into documentation	2023-11-23 12:34:22 +00:00
Fabian Joswig	fb17a46eb9	[docs] latex detection in example notebooks improved.	2023-11-22 17:53:58 +01:00
fjosw	4317187392	Merge branch 'develop' into documentation	2023-07-21 13:17:11 +00:00
Fabian Joswig	01ef97ffdf	docs: example 5 validation updated.	2023-07-20 12:20:06 +01:00
fjosw	9a186d6c30	Merge branch 'develop' into documentation	2023-07-19 11:13:42 +00:00
Fabian Joswig	1e438356fd	Vectorized gamma_method (#207) ... * feat: vectorized gamma_method function added. * feat: vectorized gamma method generalized to also work on other objects like Corr or Fit_result. * feat: alias gamma_method for vectorized gamma_method added. * docs: example 5 updated to include vectorized gamma_method. * docs: output of example 5 updated.	2023-07-19 12:13:20 +01:00
fjosw	dd14b35905	Merge branch 'develop' into documentation	2023-03-09 14:26:18 +00:00
Fabian Joswig	e41f869d18	docs: version guard added to combined fit example.	2023-03-09 13:38:51 +00:00
fjosw	822ce887c1	Merge branch 'develop' into documentation	2023-02-02 15:09:30 +00:00
Fabian Joswig	3236ba54e7	Merge pull request #134 from PiaLJP/develop ... sample implementation of a (uncorrelated) combined fit	2023-02-02 15:09:11 +00:00
Fabian Joswig	8cc9c835f7	docs: remove deprecated call to checkdep_usetex.	2023-01-26 17:16:17 +00:00
fjosw	5eda97cce8	Merge branch 'develop' into documentation	2023-01-24 13:07:04 +00:00
Fabian Joswig	615795dc5b	docs: gm alias added to basic example, hyperlink fixed in documentation.	2023-01-24 13:06:14 +00:00
Fabian Joswig	49109dac58	docs: Explanation about ensemble names also made more explicit in ... examples.	2023-01-24 13:01:58 +00:00
Fabian Joswig	32dcb7438c	build: combined fit example notebook renamed.	2022-12-21 12:58:00 +01:00
ppetrak	80c8a0f979	feat: added (default) method Levenberg-Marquardt, test added	2022-12-20 15:26:13 +01:00
ppetrak	c14d162f7e	clean-up	2022-12-19 14:09:24 +01:00
ppetrak	3d6ec7b397	fix: flak8 & pytest	2022-12-19 14:03:45 +01:00
ppetrak	500c5234cf	clean-up	2022-12-16 18:55:43 +01:00
ppetrak	9a05fc916a	incorparated (uncorrelated) combined fits in fits.least_squares	2022-12-16 18:47:25 +01:00
ppetrak	78c7c32f1c	(temporary) least squares function for combined fits with dictionaries (+ example)	2022-12-14 15:09:42 +01:00
fjosw	8148b3a2ca	Merge branch 'develop' into documentation	2022-09-30 15:26:17 +00:00
Fabian Joswig	6a57264868	docs: data management example refined.	2022-09-29 17:11:24 +01:00
Fabian Joswig	9a7f5679c9	docs: first version of data management example added.	2022-09-29 09:46:15 +01:00
Fabian Joswig	cf7919c936	docs: first two examples extended.	2022-09-29 09:22:41 +01:00
fjosw	2409bfdcf5	Merge branch 'develop' into documentation	2022-07-22 09:27:21 +00:00
Fabian Joswig	62814c1fff	docs: typos in example notebooks corrected.	2022-07-21 13:29:27 +01:00
fjosw	9cf2f80d22	Merge branch 'develop' into documentation	2022-05-22 10:38:50 +00:00
Fabian Joswig	1054f749e9	docs: check for latex availability added to examples.	2022-05-20 11:00:52 +01:00
fjosw	7cc9a238b9	Merge branch 'develop' into documentation	2022-05-18 15:21:30 +00:00
Fabian Joswig	cfc21a2a5e	docs: GEVP example updated to new syntax.	2022-05-16 12:06:33 +01:00
fjosw	cef79ef113	Merge branch 'develop' into documentation	2022-05-16 09:56:28 +00:00
Fabian Joswig	9e982bc025	docs: examples fixed	2022-05-14 11:46:57 +01:00
fjosw	53cfbecb59	Merge branch 'develop' into documentation	2022-05-03 09:49:11 +00:00
Fabian Joswig	a28ef38f00	examples: Example 06 updated to work with new default options for GEVP	2022-05-03 10:44:03 +01:00
fjosw	7cfdc4dcfb	Merge branch 'develop' into documentation	2022-02-22 09:51:05 +00:00
Simon Kuberski	5e1724d7e0	Adapted json_schema	2022-02-22 09:31:01 +01:00
fjosw	df0162351c	Merge branch 'develop' into documentation	2022-02-18 09:15:34 +00:00
JanNeuendorf	951233ab79	Fixed bug in Corr._init_() , added auto_gamma argument to plateaus and updated the examples.	2022-02-18 09:46:07 +01:00
Simon Kuberski	ed8274d7c4	Added JSON schema for validation and documentation purposes	2022-02-16 14:27:40 +01:00
fjosw	375c4f6b91	Merge branch 'develop' into documentation	2022-02-15 13:53:12 +00:00
Fabian Joswig	891f77bcef	docs: typo in gevp example fixed, additional call to gamma_method ... added.	2022-02-15 13:40:50 +00:00
Fabian Joswig	199df2b344	docs: correlator examples updated with additional calls to gamma_method	2022-02-15 13:38:22 +00:00
fjosw	793d3d5cbd	Merge branch 'develop' into documentation	2022-02-08 14:06:57 +00:00
Fabian Joswig	1196935e4e	refactor!: Renamed methods smearing into index and smearing_symmetric ... into matrix_symmetric	2022-02-08 14:06:04 +00:00
fjosw	f82e460e47	Merge branch 'develop' into documentation	2022-01-28 15:55:38 +00:00
Fabian Joswig	fbb98e05f6	docs: examples for the gevp moved from correlator example to independent ... file. Docstring of Corr.smearing added.	2022-01-28 15:54:08 +00:00
fjosw	46db6d41e7	Merge branch 'develop' into documentation	2022-01-27 14:16:18 +00:00