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973 commits

Author SHA1 Message Date
ppetrak
80c8a0f979 feat: added (default) method Levenberg-Marquardt, test added 2022-12-20 15:26:13 +01:00
jkuhl-uni
134fe7d3f7 first steps to output in the right format 2022-12-20 15:08:34 +01:00
jkuhl-uni
ae62548661 Add a better docstring to read_ms5_xsf method 2022-12-20 13:44:07 +01:00
jkuhl-uni
f74793b765 Add docstring to read_ms5_xsf method 2022-12-20 13:36:08 +01:00
Fabian Joswig
0f440d1d6e
fix: reapplied changes to hadrons.get_cnfg_number. 2022-12-20 10:16:07 +01:00
jkuhl-uni
ed0b7cad3f now able to read not just one config 2022-12-20 09:56:10 +01:00
jkuhl-uni
3399b72bfb new idea for reading ms5_xsf data 2022-12-19 18:29:51 +01:00
Fabian Joswig
33ff2219ba
fix: Combined fit can now handle list and array inputs for y-values, test added. 2022-12-19 16:06:12 +01:00
Fabian Joswig
140b626aae
fix: Combined fit can now handle list and array inputs for x-values, 
test added.
 2022-12-19 15:15:24 +01:00
ppetrak
3d6ec7b397 fix: flak8 & pytest 2022-12-19 14:03:45 +01:00
ppetrak
500c5234cf clean-up 2022-12-16 18:55:43 +01:00
ppetrak
9a05fc916a incorparated (uncorrelated) combined fits in fits.least_squares 2022-12-16 18:47:25 +01:00
jkuhl-uni
6ef081acef first version of skript to read xsf data 2022-12-16 13:02:59 +01:00
ppetrak
78c7c32f1c (temporary) least squares function for combined fits with dictionaries (+ example) 2022-12-14 15:09:42 +01:00
Fabian Joswig
23708694d6
fix: bug in Corr.spaghetti_plot fixed which appeared in connection with 
the replica separator. Test adjusted.
 2022-12-07 12:23:49 +00:00
Fabian Joswig
19bf558c78
feat: Hotelling t-squared p-value for correlated fits added. 2022-12-06 17:17:03 +00:00
Fabian Joswig
d7628b69d1
feat: Improve str conversion of numpy.ndarrays containing pyerrors Obs. 2022-12-01 16:00:17 +00:00
Fabian Joswig
fc3657be11
feat: read_DistillationContraction_hd5 can now handle complex 
normalization of triangle diagrams.
 2022-12-01 14:23:37 +00:00
Fabian Joswig
b4741edf10
build: version number bumped to 2.5.0+dev 2022-12-01 10:46:38 +00:00
Fabian Joswig
65e0485736
build: version number bumped to 2.4.0, CHANGELOG updated. 2022-12-01 10:41:10 +00:00
Fabian Joswig
6eba4ee473
fix: typo in input.json corrected. 2022-11-30 16:57:31 +00:00
Fabian Joswig
873627fd95
refactor: unnecessary brackets removed. 2022-11-30 16:54:12 +00:00
Fabian Joswig
7eebba8387
feat: construction of G0 in GEVP simplified and explicit check for 
positive-semidefiniteness added.
 2022-11-30 16:42:30 +00:00
Fabian Joswig
d7649834d5
refactor: GEVP matrix cast also simplified for unsorted case. 2022-11-30 16:39:12 +00:00
Fabian Joswig
42f1e6e7fb
refactor: matrix Obs to double cast simplified. 2022-11-30 16:36:51 +00:00
Fabian Joswig
94bbd75b1d
refactor: removed unnecessary import. 2022-11-29 14:04:51 +00:00
Fabian Joswig
2ecfb4e70a
Merge branch 'develop' of github.com:fjosw/pyerrors into develop 2022-11-29 14:01:52 +00:00
Fabian Joswig
cc6e95e7a9
fix: removed misleading warning in input.hadrons functions. 2022-11-29 13:58:58 +00:00
Fabian Joswig
9f88ea8ae8
Merge pull request #130 from s-kuberski/feature/json_io 
feat: JSON export can handle numpy.int64 entries
 2022-11-29 13:39:32 +00:00
Fabian Joswig
6258a4484e
fix: minor bug in input.hadrons.read_DistillationContraction_hd5 fixed. 2022-11-28 15:31:19 +00:00
Fabian Joswig
7b740c03d4
fix: bug in reading of flow observables fixed which appeared when 
specifying names.

The files detected files were *not* alphabetically ordered so a wrong
naming could happen in case one specifies names explicitly.
 2022-11-18 16:30:28 +00:00
Fabian Joswig
89dbf3c08c
fix: error handling in obs.correlate improved. 2022-11-18 16:22:08 +00:00
Fabian Joswig
6f4dd6c46c
feat: postfix kwarg added to functions which read flow observables in 
openQCD submodule.
 2022-11-18 16:10:15 +00:00
Fabian Joswig
64e564c5fc
fix: error handling in read_rwms improved. 2022-11-18 15:59:43 +00:00
Fabian Joswig
c4ca0faaa6
docs: docstring of read_sfcf extended. 2022-11-18 15:35:30 +00:00
Fabian Joswig
c0e3c433d0
docs: warning added to docstring of covariance. 2022-11-16 10:43:12 +00:00
Simon Kuberski
9ba46870d0 feat: JSON export can handle numpy.int64 entries 2022-10-25 16:16:07 +02:00
Fabian Joswig
e413bcefbc
docs: input/hadrons unevenly spaced exception text more detailed. 2022-10-24 11:23:25 +01:00
Fabian Joswig
cae02bfa53
fix: Fixed bug in details which appears when tau has vanishing error. 2022-10-21 12:11:02 +01:00
Simon Kuberski
d5a766ee16 feat: Speed up covariance for irregular MC chains 2022-10-21 11:05:54 +02:00
Simon Kuberski
9813f741f9 feat: added log-derivatives and symmetric effective mass 2022-10-19 16:08:31 +02:00
Fabian Joswig
46c54a3f95
Merge pull request #125 from fjosw/feature/improved_details 
Improved details output
 2022-10-19 13:26:30 +01:00
Fabian Joswig
a155cfc47a
feat: First and last configuration added to output of details for 
irregular chains.
 2022-10-19 13:15:48 +01:00
Fabian Joswig
1b22d34156
fix: dtauint fixed for irregular gapped chains. 2022-10-19 11:58:02 +01:00
Fabian Joswig
4959de82e3
feat: uncertainty formatting refactored, details output improved. 2022-10-19 11:43:43 +01:00
Fabian Joswig
1da1f65c41
feat: step size for tau int calculation is now displayed in output of 
details method.
 2022-10-19 11:12:27 +01:00
Simon Kuberski
150a13136c fix: corrected bias correction of ddvalue for irregular chains 2022-10-17 17:50:24 +02:00
Simon Kuberski
89b0c37e76 fix: corrected bias correction of tau_int for irregular chains 2022-10-17 17:40:27 +02:00
Simon Kuberski
fd4c866fdd fix: bug in automatic window for irregular chains fixed 2022-10-17 14:38:23 +02:00
Fabian Joswig
5e9cc3a807
build: version number bumped to 2.4.0+dev 2022-10-13 12:39:21 +01:00