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740 commits

Author SHA1 Message Date
Fabian Joswig
a6ebcb59bb feat: default value for if_exist in to_sql changed to fail, test for 
this behavior added.
 2022-07-04 17:22:35 +01:00
Fabian Joswig
845b4e60ac fix: pandas.to_sql does not write an index to the db anymore, docs 
extended, test added.
 2022-07-04 17:08:20 +01:00
Fabian Joswig
54789f7fe6 build: sqlite3 added as requirement. 2022-07-04 16:54:51 +01:00
Fabian Joswig
f58ef11845 refactor: pandas serialize and deserialize removed from global 
namespace.
 2022-07-04 14:59:17 +01:00
Fabian Joswig
265bad3ed8 feat: sqlite functionality added to pandas submodule. 2022-07-04 14:56:59 +01:00
Fabian Joswig
dc45894b64 fix: json format detection in deserialization of pandas dataframe made 
more general and less dependant on the json implementation.
 2022-07-04 14:47:01 +01:00
Fabian Joswig
cc9f47c686 feat: pandas DataFrame serialization and deserialization can now also 
deal with gzipped json columns. Tests added.
 2022-07-04 14:19:30 +01:00
Fabian Joswig
e1a760a058 refactor: refactored pandas serialize and deserialize functions. 2022-07-04 12:04:19 +01:00
Fabian Joswig
c6ec11045c fix: redundant export of not gzipped pandas Dataframe removed. 2022-06-30 15:49:40 +01:00
Fabian Joswig
153cc795b8 feat: pandas DataFrames with Corr columns can now also be imported and 
exported.
 2022-06-30 15:26:31 +01:00
Fabian Joswig
29820f8e61 fix: don't write index column to csv file in input.pandas.dump_df. 2022-06-30 14:12:51 +01:00
Fabian Joswig
42a6dbddd4 feat: dump and load functionality for pandas dataframes containing Obs 
objects added.
 2022-06-30 14:05:11 +01:00
Fabian Joswig
763c759ae0 fix: Corr.m_eff can now returns None entries if the correlator has a 
sign flip. Before that the logarithm of a negative number was computed
and a warning was thrown.
 2022-06-28 14:40:49 +01:00
Fabian Joswig
92562d50e7 refactor: Unnecessary assignment to iread removed in input.bdio. 2022-06-27 13:09:33 +01:00
Fabian Joswig
690bc37440 docs: citing block moved up in documentation. 2022-06-24 16:19:28 +01:00
Fabian Joswig
86a45eb47b refactor: Unused variable in fit function detection removed. 2022-06-24 13:12:53 +01:00
Fabian Joswig
fe9696841f fix: Exception types for fit function detection specified. 2022-06-24 13:10:06 +01:00
Fabian Joswig
3e29cf9ca8 fix: detection of invalid fit functions extended. 2022-06-24 12:50:26 +01:00
Fabian Joswig
dc396e542c docs: Obs.reweight docstring now matches method arguments. 2022-06-23 14:04:42 +01:00
Fabian Joswig
0346e95f3f refactor: division in pe.reweight simplified. 2022-06-23 13:56:07 +01:00
Fabian Joswig
d922b72f3b feat: Obs.reweight method added. 2022-06-23 13:50:24 +01:00
Fabian Joswig
b047f12c12 feat: bbox_inches='tight' added to Corr.show savefig 2022-06-20 15:50:56 +01:00
Fabian Joswig
13b688c4b2 feat: title argument added to Corr.show 2022-06-20 14:39:41 +01:00
Simon Kuberski
2c0e8e9198 Removed superfluous print statement 2022-06-19 02:06:44 +02:00
Simon Kuberski
061ba6ecfa Bugfixes in dobs 2022-06-19 02:03:29 +02:00
Simon Kuberski
c9789a34e6 Resolved merge conflict in tests 2022-06-19 01:46:31 +02:00
Fabian Joswig
6ef9d99619 refactor: redundant check in input.hadrons.read_DistillationContraction 
removed.
 2022-06-17 16:36:01 +01:00
Fabian Joswig
a545545d73 fix: Another modification of parameter with default in input.dobs fixed. 2022-06-17 10:17:18 +01:00
Fabian Joswig
0150ef4c0b refactor: imports of scipy.stats in fits simplified. 2022-06-15 14:14:01 +01:00
Fabian Joswig
d600793d0e fix: unreachable statement in input.misc.read_pbp removed. 2022-06-15 14:07:35 +01:00
Fabian Joswig
abdeace107 fix: Modification of parameter with default in Corr.__repr__ fixed. 2022-06-15 14:05:41 +01:00
Fabian Joswig
02403fc282 fix: Modification of parameter with default in input.dobs fixed. 2022-06-15 14:04:07 +01:00
Fabian Joswig
d79aa2cf74 refactor: range in Corr.print and __repr__ renamed to print_range 2022-06-15 14:01:26 +01:00
Fabian Joswig
1f113a3b29 refactor: comparison of constants removed. 2022-06-15 13:48:34 +01:00
Janneuendorf
e671d38a11 fix 2022-06-14 16:06:08 +02:00
Janneuendorf
bd6c0a223b Quick fix to corr.m_eff(). Zero values no longer produce errors but are handled as nones in m_eff(). 2022-06-14 15:49:20 +02:00
Fabian Joswig
5c47188931 build: version number bumped to 2.2.0+dev 2022-06-13 14:04:25 +01:00
Fabian Joswig
2ed815ddcc build: version number bumped to 2.1.3, CHANGELOG updated. 2022-06-13 13:36:14 +01:00
Fabian Joswig
d736c001dc fix: further checks for multi-dimensional correaltors and None entries 
added to methods of Corr class.
 2022-06-13 13:18:37 +01:00
Fabian Joswig
a323d60b79 fix: Exception added when symmetric or anti_symmetric are called on 
multi-dimensional correlator.
 2022-06-13 13:08:05 +01:00
Fabian Joswig
ed50240d29 fix: check for correlator None entries refactored and added to all 
elementary operations. Tests added.
 2022-06-13 12:59:54 +01:00
Fabian Joswig
5359a30b97 fix: Bug in Corr.projected fixed which appears in connection with arrays 
of None as Corr entry.
 2022-06-13 11:59:05 +01:00
Fabian Joswig
0d86df2506 build: Version number bumped to 2.2.0+dev, CHANGELOG added to project 
links in setup.py
 2022-06-10 10:30:00 +01:00
Fabian Joswig
efd6d97d0a docs: CHANGELOG updated, version number bumped to 2.1.2 2022-06-10 10:21:28 +01:00
Fabian Joswig
78f576a35e fix: Corr.matrix_symmetric now also works if entries of the correlators 
are arrays with at least one None entry.
 2022-06-09 16:47:13 +01:00
Fabian Joswig
02ed8ecd32 build: version number bumped to 2.2.0+dev 2022-06-07 10:59:11 +01:00
Fabian Joswig
92285942ac build: Version number bumped to 2.1.1, CHANGELOG updated. 2022-06-06 15:56:19 +01:00
Fabian Joswig
155c329921 fix: bug in error propagation for correlated fits fixed. 2022-06-06 15:47:41 +01:00
Fabian Joswig
6bd724715f fix: Fit_result.gamma_method can now be called with kwargs 2022-06-06 15:04:16 +01:00
Fabian Joswig
ccb424a251 fix: hide_sigma in Corr.show now ignores the entry at 0 for the 
estimation of the plot range.
 2022-05-31 13:43:34 +01:00