* [Fix] Removed the possibility to create an Obs from data on several replica
* [Fix] extended tests and corrected a small bug in the previous commit
---------
Co-authored-by: Simon Kuberski <simon.kuberski@cern.ch>
* [CI] Speed up install phase by using uv
* [CI] Use uv in examples workflow
* [CI] Fix yml syntax
* [CI] Install uv into system env
* [CI] Add system install for examples workflow
* [Fix] Fix test for membership should be 'not in' (E713)
* [Fix] Fix module imported but unused (F401)
* [Fix] More precise Exception types in dirac, obs and correlator
* fix: corrected bug that prevented combined fits with multiple x-obs in some cases
* made test more complex
* [Fix] Slightly increase tolerance for matrix function test.
* Adapt test_merge_idx to compare lists
---------
Co-authored-by: Simon Kuberski <simon.kuberski@cern.ch>
Co-authored-by: Fabian Joswig <fjosw@users.noreply.github.com>
* feat: corr_matrix kwargs as input for least squares fit
* feat/tests: inverse covariance matrix and correlation matrix kwargs as input for least squares function
* feat/tests/example: reduced new kwargs to 'inv_chol_cov_matrix' and outsourced the inversion & cholesky decomposition of the covariance matrix (function 'invert_corr_cov_cholesky(corr, covdiag)')
* tests: added tests for inv_chol_cov_matrix kwarg for the case of combined fits
* fix: renamed covdiag to inverrdiag needed for the cholesky decomposition and corrected its documentation
* examples: added an example of a correlated combined fit to the least_squares documentation
* feat/tests/fix(of typos): added function 'sort_corr()' (and a test of it) to sort correlation matrix according to a list of alphabetically sorted keys
* docs: added more elaborate documentation/example of sort_corr(), fixed typos in documentation of invert_corr_cov_cholesky()
* [fix] First version of a fix to cope with missing replica.
* [fix] added test for missing replica
* [fix] refactored fix for missing replica, modified tests
* [fix] refinement of tests
* [fix] Fixed intendation for flake8
* [feat] special module with Bessel functions added.
* [feat] init adapted.
* [tests] First test for special module added.
* [tests] Check kn special function derivative explicitly vs numerical
derivative of scipy function.
* [feat] Added remaining autograd scipy special functions to the special
module.
* [feat] Imports corrected, docstring added.
* Added the function error_gevp() to compute the gevp with statistical errors.
* Changed method name from error_gevp to error_GEVP and removed automatic gamma method
* added auto_gamma to error_GEVP
* Specified exceptions in Corr.error_GEVP
* Fixed a wrong path. It should be np.linalg.LinAlgError
* Added a test for error_GEVP
* The tests of error_gevp loads a test matrix
* Incorporated eigenvectors with uncertainties in GEVP routine
* Cleaned up GEVP routines
* Cleaned up breaking change from merge
* Released tolerance in test of GEVP
* Repaired broken GEVP test
---------
Co-authored-by: Simon Kuberski <simon.kuberski@uni-muenster.de>
* make template
* read_sfcf_multi running with compact format
* fix append mode, norrmal tests work
* improve readability
* add simple test for multi_read
* simple multi_test works
* add first method to check sfcf param hashes
* add docstring
* simple test for o format working
* use benedict to make loops easier
* introduce python-benedict as dep
* no nice_out, less error prone, found bug in tests
* Revert "introduce python-benedict as dep"
This reverts commit 9696d68b7a.
* Revert "use benedict to make loops easier"
This reverts commit fa3987479b.
* no nice output after reverts
* [build] Added jkuhl-uni as CODEOWNER for sfcf.
* refactor: flatten internal dicts
* very small test extension
* ...flake8
* docu
* Delete second sep init
---------
Co-authored-by: Fabian Joswig <fabian.joswig@uni-muenster.de>
