Commit graph

2469 commits

Author SHA1 Message Date
fjosw
55f6b21e7c Merge branch 'develop' into documentation 2024-04-01 14:14:28 +00:00
Fabian Joswig
1fce785597 [Build] Version bumped to 2.11, CHANGELOG updated, numpy<2 requirement
added.
2024-04-01 16:13:48 +02:00
fjosw
d7d1cec264 Documentation updated 2024-03-25 14:51:05 +00:00
fjosw
9cab1d105d Merge branch 'develop' into documentation 2024-03-25 14:50:35 +00:00
Justus Kuhlmann
254a19f321
Catch error if no replica are found in the geiven directory (#230) 2024-03-25 15:50:19 +01:00
Fabian Joswig
0df5882d1f
[ci] Include python 3.12 in ci after new dateutils release. (#229) 2024-03-01 07:14:01 +01:00
fjosw
bee321536b Documentation updated 2024-02-18 12:40:21 +00:00
fjosw
6a344bcddf Merge branch 'develop' into documentation 2024-02-18 12:39:50 +00:00
Justus Kuhlmann
b930fab9c2
Fix keyword files with list of lists (#226)
* first impl. handle reps with list of lists

* implement explicit type checks
2024-02-18 13:39:35 +01:00
Fabian Joswig
43383acead
[ci] Update actions to use Node.js 20 (#228) 2024-02-06 17:54:33 +01:00
fjosw
745f9a9bfb Documentation updated 2024-01-21 11:42:22 +00:00
fjosw
93d5a7cd6c Merge branch 'develop' into documentation 2024-01-21 11:41:49 +00:00
Fabian Joswig
1713ea146a
[ci] Install pyarrow in pytest workflow to silence pandas warnings. (#227) 2024-01-21 12:41:37 +01:00
fjosw
33f5b393ba Documentation updated 2024-01-11 16:49:41 +00:00
fjosw
14ae2ab4e5 Merge branch 'develop' into documentation 2024-01-11 16:49:08 +00:00
Justus Kuhlmann
df1873b5ac
Throw error when trying to only find idls that are not present (#224) 2024-01-11 17:48:51 +01:00
Fabian Joswig
b5bc687625 [ci] Removed codeql workflow. 2024-01-07 17:24:11 +01:00
fjosw
ace4ded5e2 Documentation updated 2024-01-07 16:22:53 +00:00
fjosw
efb8c0ca72 Merge branch 'develop' into documentation 2024-01-07 16:22:21 +00:00
Fabian Joswig
5122e260ea
Special function module (#221)
* [fix] Fixed intendation for flake8

* [feat] special module with Bessel functions added.

* [feat] init adapted.

* [tests] First test for special module added.

* [tests] Check kn special function derivative explicitly vs numerical
derivative of scipy function.

* [feat] Added remaining autograd scipy special functions to the special
module.

* [feat] Imports corrected, docstring added.
2024-01-07 17:22:05 +01:00
fjosw
45f2dd2fa0 Documentation updated 2023-11-24 16:16:14 +00:00
fjosw
9edcbdea3c Merge branch 'develop' into documentation 2023-11-24 16:15:42 +00:00
Fabian Joswig
1360942a7b [build] version bumped to 2.11.0-dev 2023-11-24 17:15:12 +01:00
fjosw
998e12daf2 Documentation updated 2023-11-24 16:06:26 +00:00
fjosw
d2d33e7135 Merge branch 'develop' into documentation 2023-11-24 16:05:54 +00:00
Fabian Joswig
d0cfc67a43 [release] Version bumped to 2.10.0, CHANGELOG updated. 2023-11-24 17:05:11 +01:00
fjosw
d0ee2f886a Documentation updated 2023-11-23 12:34:56 +00:00
fjosw
66ebbd2669 Merge branch 'develop' into documentation 2023-11-23 12:34:22 +00:00
Fabian Joswig
728c2e55ee
[fix] fixed how the filestem is extracted in hadrons/read_hdf5. (#218) 2023-11-23 13:34:07 +01:00
Fabian Joswig
fb17a46eb9 [docs] latex detection in example notebooks improved. 2023-11-22 17:53:58 +01:00
fjosw
fc9a03dd58 Documentation updated 2023-11-17 17:58:03 +00:00
fjosw
4859640b41 Merge branch 'develop' into documentation 2023-11-17 17:57:32 +00:00
JanNeuendorf
e1a4d0c218
Additional GEVP method with errors (#195)
* Added the function error_gevp() to compute the gevp with statistical errors.

* Changed method name from error_gevp to error_GEVP and removed automatic gamma method

* added auto_gamma to error_GEVP

* Specified exceptions in Corr.error_GEVP

* Fixed a wrong path. It should be np.linalg.LinAlgError

* Added a test for error_GEVP

* The tests of error_gevp loads a test matrix

* Incorporated eigenvectors with uncertainties in GEVP routine

* Cleaned up GEVP routines

* Cleaned up breaking change from merge

* Released tolerance in test of GEVP

* Repaired broken GEVP test

---------

Co-authored-by: Simon Kuberski <simon.kuberski@uni-muenster.de>
2023-11-17 18:57:18 +01:00
Fabian Joswig
a8d16631d8 [doc] Added Programming Language :: Python :: 3.12 classifier to setup.py 2023-11-14 20:28:52 +01:00
fjosw
742f18d333 Documentation updated 2023-11-10 18:14:08 +00:00
fjosw
a1b9473293 Merge branch 'develop' into documentation 2023-11-10 18:13:28 +00:00
s-kuberski
d689959b1f
fix: Check if configs appears multiple times when creating an obs (#216) 2023-11-10 19:13:11 +01:00
Fabian Joswig
eb83ff2091 [ci] removed failing pytest 3.12 test for now. 2023-11-10 14:21:35 +01:00
Fabian Joswig
e032412ebd
[ci] Added python 3.12 to pytest and examples workflows. (#212) 2023-10-27 08:39:33 +02:00
fjosw
feb19ca04c Documentation updated 2023-10-24 17:32:00 +00:00
fjosw
bdb7c7e2ee Merge branch 'develop' into documentation 2023-10-24 17:31:15 +00:00
s-kuberski
dc63142f8e
Fixed bugs for combined fits with multiple independent variables (#211) 2023-10-24 19:30:52 +02:00
fjosw
3b766546af Documentation updated 2023-10-20 17:23:57 +00:00
fjosw
2423c7e49e Merge branch 'develop' into documentation 2023-10-20 17:23:13 +00:00
Justus Kuhlmann
0ef8649031
Feat/read sfcf multi (#210)
* make template

* read_sfcf_multi running with compact format

* fix append mode, norrmal tests work

* improve readability

* add simple test for multi_read

* simple multi_test works

* add first method to check sfcf param hashes

* add docstring

* simple test for o format working

* use benedict to make loops easier

* introduce python-benedict as dep

* no nice_out, less error prone, found bug in tests

* Revert "introduce python-benedict as dep"

This reverts commit 9696d68b7a.

* Revert "use benedict to make loops easier"

This reverts commit fa3987479b.

* no nice output after reverts

* [build] Added jkuhl-uni as CODEOWNER for sfcf.

* refactor: flatten internal dicts

* very small test extension

* ...flake8

* docu

* Delete second sep init

---------

Co-authored-by: Fabian Joswig <fabian.joswig@uni-muenster.de>
2023-10-20 19:22:55 +02:00
fjosw
f1fb56189f Documentation updated 2023-09-17 16:12:47 +00:00
fjosw
e4da34ae59 Merge branch 'develop' into documentation 2023-09-17 16:12:08 +00:00
Fabian Joswig
957030cba0 fix: explicit type check replaced by isinstance in fits.least_squares. 2023-09-17 18:11:26 +02:00
fjosw
923b678fef Documentation updated 2023-09-15 07:03:59 +00:00
fjosw
95c4908c0c Merge branch 'develop' into documentation 2023-09-15 07:03:10 +00:00