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Author SHA1 Message Date
Fabian Joswig
57834be62e feat: argument save added to Obs.plot_piechart 2022-05-13 16:42:22 +01:00
Fabian Joswig
10fc8b1f6e feat: GEVP not evaluated for t <= t0, additional checks added, 
Eigenvector sort method can now cope with None entries.
 2022-05-12 16:40:32 +01:00
Fabian Joswig
165e294b90 tests: test for Corr.matrix_symmetric added. 2022-05-12 16:08:42 +01:00
Fabian Joswig
d3e72ef7d4 fix: Exception added for cholesky decomposition of complex matrices. 2022-05-12 15:15:57 +01:00
Fabian Joswig
be0990d112 fix: spacing fixed 2022-05-12 15:12:42 +01:00
Fabian Joswig
acb47a6782 fix: check for CObs in linalg._mat_mat_op generalized. 2022-05-12 15:10:24 +01:00
Fabian Joswig
07a6bb8a9d fix: small bug in input.hadrons._get_files fixed. 2022-05-12 10:54:07 +01:00
Fabian Joswig
c852de0688 tests: GEVP test extendd, test case for warning when ts and Eigenvalue 
sorting are used at the same time.
 2022-05-09 14:16:46 +01:00
Fabian Joswig
e557c9b54d feat: runtime warning added when ts is used in combination with 
sorted_list="Eigenvalue" in Corr.GEVP
 2022-05-09 14:14:26 +01:00
Fabian Joswig
36001b2159 feat: input.hadrons.read_meson_hd5 file access optimized. 2022-05-09 14:04:59 +01:00
Fabian Joswig
9d4e1b9645
Merge pull request #98 from s-kuberski/feature/json_io 
Use rapidjson instead of json for I/O
 2022-05-09 13:40:28 +01:00
Simon Kuberski
66ab9e16dd Added dependency to python-rapidjson 2022-05-09 14:36:50 +02:00
Simon Kuberski
78ab077eb8 Use rapidjson instead of json for I/O 2022-05-09 12:51:58 +02:00
Fabian Joswig
f2f2098adb fix: data extraction of different diagrams fixed. 2022-05-05 22:30:46 +01:00
Fabian Joswig
77f0fbf699 feat: Exception added if Corr.GEVP is called on single correlator 
instead of a correlator matrix.
 2022-05-03 10:51:08 +01:00
Fabian Joswig
a6deb52a04 fix: Corr.GEVP now uses symmetrized correlator matrix also for sorting 
methods.
 2022-05-03 10:48:35 +01:00
Fabian Joswig
a28ef38f00 examples: Example 06 updated to work with new default options for GEVP 2022-05-03 10:44:03 +01:00
Fabian Joswig
4bc95b6fdf feat: Standard option for Corr.GEVP is now sorted_list='Eigenvalue'. 2022-05-03 10:27:11 +01:00
Fabian Joswig
ae7b5d4278 build: autograd dependency updated to newest release. 2022-05-03 10:23:49 +01:00
Fabian Joswig
d4c913ab88
Merge pull request #97 from s-kuberski/feature/dobs 
Feature/dobs
 2022-05-03 09:26:27 +01:00
Simon Kuberski
2d68d496c9 Added dependency to lxml 2022-05-03 09:18:41 +02:00
Simon Kuberski
729a61db61 Changed some details regarding dobs implementation 2022-05-02 15:12:07 +02:00
Simon Kuberski
44b268fcf9 Merge branch 'develop' into feature/dobs 2022-05-02 14:21:25 +02:00
Fabian Joswig
0952252a64 fix: Exception added if unknown value for sorted_list is specified in 
Corr.GEVP
 2022-05-02 12:58:43 +01:00
Fabian Joswig
c5b25ebdd9 feat: Argument references added to Corr.show 2022-05-02 12:13:03 +01:00
Fabian Joswig
d0f96f2bf8 feat: argument hide_sigma added to Corr.show which allows to 
automatically hide data points with large errors.
 2022-05-02 10:12:23 +01:00
Fabian Joswig
9e3e84ffcd
Merge pull request #96 from s-kuberski/feature/GEVP 
Implemented the pruning of large correlation matrices by the solution…
 2022-04-29 15:34:33 +01:00
Simon Kuberski
0ec6f14b24 Removed redundant test in prune 2022-04-29 16:03:19 +02:00
Fabian Joswig
fd82687b08 feat: first version of read_DistillationContraction_hd5 added. 2022-04-29 13:58:10 +01:00
Fabian Joswig
c4c06b5864 fix: in input.hadrons._get_files the suffix '.h5. is now conditionally 
removed.
 2022-04-29 11:18:41 +01:00
Fabian Joswig
912629b845 fix: additional data point included in obs.plot_tauint figures. 2022-04-29 10:15:51 +01:00
Fabian Joswig
bf4680750c feat: auto yrange of obs.plot_tauint improved. 2022-04-29 10:13:29 +01:00
Simon Kuberski
b8e5f9dfd4 Implemented the pruning of large correlation matrices by the solution of a GEVP at early times 2022-04-28 17:33:38 +02:00
Fabian Joswig
217d310ca4 tests: test for _intersection_idx extended. 2022-04-28 14:13:29 +01:00
Fabian Joswig
c7f17396e5 fix: Another bug in range detection of obs._intersection_idx fixed. 2022-04-28 14:07:42 +01:00
Fabian Joswig
99c98aeb9e fix: bug in obs._intersection_idx fixed. 2022-04-28 11:26:42 +01:00
Fabian Joswig
d96c5cab75
Merge pull request #94 from fjosw/feature/covariance_idl_first_fix 
Feature/covariance idl first fix
 2022-04-19 17:29:31 +01:00
Fabian Joswig
979380eada Merge branch 'develop' of github.com:fjosw/pyerrors into develop 2022-04-19 13:14:06 +01:00
Fabian Joswig
9b356c9e97 docs: clarification on Corr.fit fitrange added. 2022-04-19 13:13:45 +01:00
Fabian Joswig
c77ab9a95d
Merge pull request #93 from s-kuberski/feature/bdio 
Removed sorting of kappas and speed improvement in read_mesons
 2022-04-19 13:09:37 +01:00
Simon Kuberski
ee631c3ee0 Removed sorting of kappas and speed improvement in read_mesons 2022-04-19 12:27:49 +02:00
Fabian Joswig
6459f46a70
Merge pull request #91 from s-kuberski/feature/bdio 
Fix: read_mesons and read_dSdm now return Obs with the correct idl based on the information in the bdio file.
 2022-04-18 11:46:17 +01:00
Simon Kuberski
a5394521e7 Fix: read_mesons and read_dSdm now return Obs with the correct idl based on the information in the bdio file. 2022-04-13 18:20:13 +02:00
Simon Kuberski
0f735c0d2d Some changes on dobs 2022-04-13 16:05:30 +02:00
Fabian Joswig
eacc9b19a3 feat: the correlation for two observables with different idls is now based on 
the intersection of two instead of the union. Tests added.
 2022-04-08 11:46:50 +01:00
Fabian Joswig
934d091249 feat: _intersection_idx and _collapse_deltas_for_merge together with 
tests added.
 2022-04-08 11:14:58 +01:00
Fabian Joswig
c9f65298b4 tests: test added that checks that correlated and uncorrelated fits give 
the same result if the input data is uncorrelated.
 2022-04-07 17:14:26 +01:00
Fabian Joswig
5e7753a66d fix: expand_deltas in covariance replaced by _expand_deltas_for_merge 
which correctly collapses idls as done in derived observable.
 2022-04-07 16:28:15 +01:00
Fabian Joswig
66997ac993 tests: test for merge_idx added. 2022-04-07 16:14:46 +01:00
Fabian Joswig
7edc617e04 tests: test for covariance of two obs with differently spaced idls 
added.
 2022-04-07 16:09:37 +01:00