Fabian Joswig
5d0d56596f
refactor: redundant tree parameter removed from
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input/hadrons/read_meson_hd5
2022-01-05 20:08:08 +01:00
jkuhl-uni
ebdc17aa66
implemented read_sfcf for append-mode output, bug fixes
2022-01-03 21:34:04 +01:00
jkuhl-uni
31c2ada963
corrected small error in init
2022-01-03 14:46:19 +01:00
jkuhl-uni
b8b1d36125
small bug fixes after first pull request
2022-01-03 14:41:14 +01:00
jkuhl-uni
76b7f159aa
read_qtop now also hands over idl of the result Obs
2022-01-03 14:40:12 +01:00
jkuhl-uni
01ada964b2
added read_qtop_sector method outsourcing funtionality of former 'full' key
2022-01-03 11:20:25 +01:00
Fabian Joswig
773fd8e4c5
docs: documentation of Corr objects added
2021-12-23 16:42:53 +01:00
JanNeuendorf
145a211bd0
Some more changes to corr
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- GEVP method can return lists of eigenvector by solving the GEVP at multiple timeslices. The ordering is done according to arXiv:2004.10472 [hep-lat]
- The projection method can deal with those lists
- Constructor for Hankel matrix from a single corr
- typechecks allow for complex-content
- .real and .imag work on corrs
- But everything else with CObs does not yet work.
2021-12-23 15:23:59 +01:00
Fabian Joswig
8d8fa82bbe
feat: Path can now be specified in Corr.dump
2021-12-23 14:42:57 +01:00
Fabian Joswig
b8c26fd41d
refactor: unnecessary code in scalar_mat_op removed
2021-12-23 14:26:17 +01:00
Fabian Joswig
1ba7566a62
refactor!: Code for numerical differentation of linalg operations
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removed
2021-12-23 14:19:24 +01:00
Fabian Joswig
b7da7f4b7e
refactor: unnecessary overloading of np.sinc removed, tests added
2021-12-23 12:29:42 +01:00
Fabian Joswig
64a8bc690f
refactor!: Obs.print method removed
2021-12-23 12:21:40 +01:00
Fabian Joswig
c8cb0e4cb8
feat: epsilon tensors moved to dirac submodule, tests added
2021-12-23 12:00:10 +01:00
Fabian Joswig
b50346dcf3
feat: rank4 epsilon tensor added
2021-12-21 20:42:56 +01:00
Fabian Joswig
bc220fceaf
fix: get_item and reweighted now work with padded correlators.
2021-12-20 11:35:04 +01:00
jkuhl-uni
b55e410dcf
input/__init__ edited to include utils
2021-12-17 15:20:04 +01:00
jkuhl-uni
c5292f8342
implemented idl into sfcf-read method
2021-12-17 15:16:17 +01:00
jkuhl-uni
5e5a9df404
hotfix, missing kwarg files in read_rwms method
2021-12-17 12:08:08 +01:00
jkuhl-uni
307738c4fd
Merge branch 'fjosw:develop' into feature/input_2.0
2021-12-16 11:11:28 +01:00
jkuhl-uni
efa8d8a91d
beta version of the openQCD.py input method
2021-12-15 12:00:11 +01:00
Simon Kuberski
5338982060
Allow Obs in json format to be pure Covobs, i.e., to have empty deltas
2021-12-14 16:27:05 +01:00
Simon Kuberski
76b483d730
Pretty output for cov and grad in json
2021-12-14 15:54:52 +01:00
Simon Kuberski
b7bc508dcf
Added covobs to json file format
2021-12-14 15:47:14 +01:00
Simon Kuberski
16ba1c1ee0
Removed parameter covobs from Obs.__init__
2021-12-14 14:15:40 +01:00
Simon Kuberski
588d0045f2
Removed unnecessary entries for idl and shape in case of covobs. Changed Obs.covobs to Obs._covobs
2021-12-14 13:07:20 +01:00
Fabian Joswig
68a9a962d7
docs: docstring of covariance adjusted.
2021-12-13 17:11:26 +00:00
Fabian Joswig
ec20ee38a6
feat!: covariance replaced by covariance2, window altered to minimum of
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the window of the two observables. Tests adjusted.
2021-12-13 17:06:03 +00:00
Fabian Joswig
3fd63f8b67
refactor: bare excepts removed.
2021-12-13 14:47:57 +00:00
Fabian Joswig
7e0308b155
docs: doc extended, typos corrected.
2021-12-11 23:06:07 +00:00
Fabian Joswig
20edefad43
docs: Introduction restructured
2021-12-11 22:59:01 +00:00
Fabian Joswig
5f2e33ccda
feat: repetative len(sample) calles reintroduced
2021-12-10 16:31:42 +00:00
Fabian Joswig
1ab16612d9
feat: changed the way empty obs are initialized
2021-12-10 16:24:40 +00:00
Fabian Joswig
7b433c8df7
refactor: unneeded parameter empty removed
2021-12-10 16:12:38 +00:00
Fabian Joswig
fe03bf9844
feat: linalg.einsum optimized
2021-12-10 15:39:57 +00:00
Fabian Joswig
207a60c085
refactor: linalg.slogdet removed
2021-12-10 14:41:56 +00:00
Fabian Joswig
a2a799b591
feat: linalg.det added, test added
2021-12-10 14:39:14 +00:00
Fabian Joswig
67ca53681a
fix: workaround for non Obs valued objects in derived_observable now
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also works outside of array mode.
2021-12-10 14:37:58 +00:00
Fabian Joswig
525dea0209
refactor: removed code from autograd master, test adjusted
2021-12-10 14:26:05 +00:00
Fabian Joswig
f6dc78f587
feat!: json format timezone is now outputted in +0000 format.
2021-12-10 10:40:49 +00:00
Fabian Joswig
2ce73fb3f2
fix: import_json_string now correctly reconstructs obs from string, test
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added
2021-12-10 10:37:50 +00:00
Fabian Joswig
b49c707127
refactor: created function import_json_string
2021-12-09 15:49:01 +00:00
Fabian Joswig
352b93ee2c
fix: the covariance functions now correctly check whether the
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gamma_method was run. Tests added.
2021-12-09 13:06:49 +00:00
Fabian Joswig
e213b37413
fix: prior fit routine adjusted to work with iminuit version >= 2
2021-12-09 12:50:52 +00:00
Fabian Joswig
071d550d1d
feat: priors in fits replaced by covobs, random hash added to avoid
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prior collisions.
2021-12-09 12:36:28 +00:00
Fabian Joswig
c2ff8c715a
refactor!: ks_test removed from develop for now.
2021-12-09 10:20:13 +00:00
Fabian Joswig
87c50f54c0
refactor!: fit_general deprecated and moved to tests
2021-12-09 10:11:31 +00:00
Fabian Joswig
8879e6b382
refactor: check in Obs.__init__ withe means!=None removed which could
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never be reached.
2021-12-09 09:44:50 +00:00
Fabian Joswig
083247389b
fix: bug occurring when Corr.fit is called without fit range fixed
2021-12-08 22:33:08 +00:00
Fabian Joswig
ae53daa915
refactor: calculation of N in Obs.__init__ optimized
2021-12-08 16:14:48 +00:00