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https://github.com/fjosw/pyerrors.git
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41fec09816
* refactor read_sfcf * adding tests for find_corr and read_compact_file * add necessary broken data for tests * fixed appended mode reading * factored out sort_names and find_files * now also using sort_files in sfcf.py * edited tests to fit with new structure * added find_files function * shifted helpfunctions to bottom of file * removed some debug lines * linting * Fixed requested changes, added silent mode * added Exception if correlator is not found by read_append_rep * use tmp_path fixture * linting silent keyword * try to fix testing for a_bb * tests: Exception testing in test_find_corr made more explicit. --------- Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>
125 lines
5.2 KiB
Python
125 lines
5.2 KiB
Python
import os
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import sys
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import inspect
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import pyerrors as pe
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import pyerrors.input.sfcf as sfin
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import shutil
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import pytest
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current_dir = os.path.dirname(os.path.abspath(inspect.getfile(inspect.currentframe())))
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parent_dir = os.path.dirname(current_dir)
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sys.path.insert(0, parent_dir)
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def build_test_environment(path, env_type, cfgs, reps):
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shutil.copytree("tests/data/sfcf_test/data_"+env_type, (path + "/data_" + env_type))
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if env_type == "o":
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for i in range(2,cfgs+1):
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shutil.copytree(path + "/data_o/test_r0/cfg1", path + "/data_o/test_r0/cfg"+str(i))
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for i in range(1,reps):
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shutil.copytree(path + "/data_o/test_r0", path + "/data_o/test_r"+str(i))
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elif env_type == "c":
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for i in range(2,cfgs+1):
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shutil.copy(path + "/data_c/data_c_r0/data_c_r0_n1", path + "/data_c/data_c_r0/data_c_r0_n"+str(i))
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for i in range(1,reps):
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os.mkdir(path + "/data_c/data_c_r"+str(i))
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for j in range(1,cfgs+1):
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shutil.copy(path + "/data_c/data_c_r0/data_c_r0_n1",path + "/data_c/data_c_r"+str(i)+"/data_c_r"+str(i)+"_n"+str(j))
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def test_o_bb(tmp_path):
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build_test_environment(str(tmp_path), "o",5,3)
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f_1 = sfin.read_sfcf(str(tmp_path) + "/data_o", "test", "f_1",quarks="lquark lquark", wf = 0, wf2=0, version = "2.0", corr_type="bb")
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print(f_1)
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assert len(f_1) == 1
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assert f_1[0].value == 351.1941525454502
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def test_o_bi(tmp_path):
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build_test_environment(str(tmp_path), "o",5,3)
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f_A = sfin.read_sfcf(str(tmp_path) + "/data_o", "test", "f_A",quarks="lquark lquark", wf = 0, version = "2.0")
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print(f_A)
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assert len(f_A) == 3
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assert f_A[0].value == 65.4711887279723
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assert f_A[1].value == 1.0447210336915187
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assert f_A[2].value == -41.025094911185185
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def test_o_bib(tmp_path):
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build_test_environment(str(tmp_path), "o",5,3)
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f_V0 = sfin.read_sfcf(str(tmp_path) + "/data_o", "test", "F_V0",quarks="lquark lquark", wf = 0, wf2 = 0, version = "2.0", corr_type="bib")
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print(f_V0)
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assert len(f_V0) == 3
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assert f_V0[0] == 683.6776090085115
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assert f_V0[1] == 661.3188585582334
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assert f_V0[2] == 683.6776090081005
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def test_c_bb(tmp_path):
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build_test_environment(str(tmp_path), "c",5,3)
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f_1 = sfin.read_sfcf(str(tmp_path) + "/data_c", "data_c", "f_1", quarks="lquark lquark", wf = 0, wf2=0, version = "2.0c", corr_type="bb")
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print(f_1)
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assert len(f_1) == 1
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assert f_1[0].value == 351.1941525454502
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def test_c_bi(tmp_path):
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build_test_environment(str(tmp_path), "c",5,3)
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f_A = sfin.read_sfcf(str(tmp_path) + "/data_c", "data_c", "f_A", quarks="lquark lquark", wf = 0, version = "2.0c")
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print(f_A)
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assert len(f_A) == 3
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assert f_A[0].value == 65.4711887279723
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assert f_A[1].value == 1.0447210336915187
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assert f_A[2].value == -41.025094911185185
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def test_c_bib(tmp_path):
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build_test_environment(str(tmp_path), "c",5,3)
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f_V0 = sfin.read_sfcf(str(tmp_path) + "/data_c", "data_c", "F_V0",quarks="lquark lquark", wf = 0, wf2 = 0, version = "2.0c", corr_type="bib")
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print(f_V0)
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assert len(f_V0) == 3
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assert f_V0[0] == 683.6776090085115
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assert f_V0[1] == 661.3188585582334
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assert f_V0[2] == 683.6776090081005
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def test_a_bb(tmp_path):
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f_1 = sfin.read_sfcf("tests/data/sfcf_test/data_a", "data_a", "f_1", quarks="lquark lquark", wf = 0, wf2=0, version = "2.0a", corr_type="bb")
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print(f_1)
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assert len(f_1) == 1
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assert f_1[0].value == 351.1941525454502
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def test_a_bi(tmp_path):
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f_A = sfin.read_sfcf("tests/data/sfcf_test/data_a", "data_a", "f_A", quarks="lquark lquark", wf = 0, version = "2.0a")
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print(f_A)
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assert len(f_A) == 3
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assert f_A[0].value == 65.4711887279723
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assert f_A[1].value == 1.0447210336915187
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assert f_A[2].value == -41.02509491118518
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def test_a_bib(tmp_path):
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f_V0 = sfin.read_sfcf("tests/data/sfcf_test/data_a", "data_a", "F_V0",quarks="lquark lquark", wf = 0, wf2 = 0, version = "2.0a", corr_type="bib")
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print(f_V0)
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assert len(f_V0) == 3
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assert f_V0[0] == 683.6776090085115
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assert f_V0[1] == 661.3188585582334
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assert f_V0[2] == 683.6776090081005
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def test_find_corr(tmp_path):
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pattern = 'name ' + "f_A" + '\nquarks ' + "lquark lquark" + '\noffset ' + str(0) + '\nwf ' + str(0)
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start_read, T = sfin._find_correlator("tests/data/sfcf_test/data_c/data_c_r0/data_c_r0_n1", "2.0c", pattern, False)
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assert start_read == 21
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assert T == 3
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pattern = 'name ' + "f_X" + '\nquarks ' + "lquark lquark" + '\noffset ' + str(0) + '\nwf ' + str(0)
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with pytest.raises(ValueError):
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sfin._find_correlator("tests/data/sfcf_test/data_c/data_c_r0/data_c_r0_n1", "2.0c", pattern, False)
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pattern = 'name ' + "f_A" + '\nquarks ' + "lquark lquark" + '\noffset ' + str(0) + '\nwf ' + str(0)
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with pytest.raises(ValueError):
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sfin._find_correlator("tests/data/sfcf_test/broken_data_c/data_c_r0/data_c_r0_n1", "2.0c", pattern, False)
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def test_read_compact_file(tmp_path):
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rep_path = "tests/data/sfcf_test/broken_data_c/data_c_r0/"
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config_file = "data_c_r0_n1"
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start_read = 469
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T = 3
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b2b = False
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name = "F_V0"
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im = False
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with pytest.raises(Exception):
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sfin._read_compact_file(rep_path, config_file, start_read, T, b2b, name, im)
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