mirror of
https://github.com/fjosw/pyerrors.git
synced 2025-11-04 09:35:45 +01:00
343 lines
8.4 KiB
JSON
343 lines
8.4 KiB
JSON
{
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"$schema": "http://json-schema.org/draft-07/schema",
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"$id": "https://github.com/fjosw/pyerrors/tree/develop/examples/json_schema.json",
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"type": "object",
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"title": "pyerrors JSON file format",
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"description": "Schema to validate JSON files according to the pyerrors file format 1.0.",
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"required": [
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"obsdata"
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],
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"optional": [
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"program",
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"version",
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"who",
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"date",
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"host",
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"description"
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],
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"properties": {
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"program": {
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"type": "string",
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"description": "The program that was used to write the file",
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"examples": [
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"pyerrors"
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]
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},
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"version": {
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"type": "string",
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"description": "The version of the file format.",
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"examples": [
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"1.0"
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]
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},
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"who": {
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"type": "string",
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"description": "The username of the creator of this file."
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},
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"date": {
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"type": "string",
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"description": "Date, when this file has been written.",
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"examples": [
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"2021-11-29 09:55:05"
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]
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},
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"host": {
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"type": "string",
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"description": "Hostname of the machine where the file has been written."
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},
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"description": {
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"type": ["number","string","boolean","object","array","null"],
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"description": "A description of the content of the file."
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},
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"obsdata": {
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"type": "array",
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"description": "Contains the actual data. One entry per structure. A structure is either a single Obs or a one-dimensional representation of a multi-dimensional object (list, array, Corr). Each Obs inside a structure has to be defined on the same set of configs.",
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"items": {
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"$ref": "#/$defs/obsdata_items"
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}
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}
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},
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"$defs": {
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"obsdata_items": {
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"type": "object",
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"description": "Contains the information for one structure of Observables.",
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"required": [
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"type",
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"value"
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],
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"optional": [
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"layout",
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"tag",
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"reweighted",
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"data",
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"cdata"
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],
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"properties": {
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"type": {
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"type": "string",
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"description": "Specifies the type of the structure, needed for the correct parsing of flattened structures.",
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"examples": [
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"Obs", "List", "Array", "Corr"
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]
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},
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"layout": {
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"type": "string",
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"description": "The layout of the structure. One entry per dimension, separated by commas",
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"default": "1",
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"examples": [
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"1", "1, 2", "2, 2, 4"
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]
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},
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"value": {
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"type": "array",
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"description": "The mean values of all Obs inside the structure.",
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"examples": [
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[1.2],
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[2.3, 2.1, 3.1]
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],
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"items": [{
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"type": "number",
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"description": "A mean value of an Obs."
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}]
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},
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"tag": {
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"type": ["number","string","boolean","object","array","null"],
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"description": "Optional descriptor of the structure."
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},
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"reweighted": {
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"type": "boolean",
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"description": "May be used to specify whether the Obs inside the structure have been reweighted."
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},
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"data": {
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"type": "array",
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"description": "Contains the data for each ensemble.",
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"items": {
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"$ref": "#/$defs/ensdata_items"
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}
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},
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"cdata": {
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"type": "array",
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"description": "Contains the data for each covariance matrix.",
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"items": {
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"$ref": "#/$defs/cdata_items"
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}
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}
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}
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},
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"ensdata_items": {
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"type": "object",
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"description": "The data for one single ensemble",
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"required": [
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"id",
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"replica"
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],
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"properties": {
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"id": {
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"type": "string",
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"description": "The id of the ensemble"
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},
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"replica": {
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"type": "array",
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"description": "Contains the data for each replica of the ensemble.",
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"items": {
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"$ref": "#/$defs/repdata_items"
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}
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}
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}
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},
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"repdata_items": {
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"type": "object",
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"description": "The data for one single replica",
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"required": [
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"name",
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"deltas"
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],
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"properties": {
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"name": {
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"type": "string",
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"description": "The name of the replica."
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},
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"deltas": {
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"type": "array",
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"description": "The actual data: Contains configuration numbers and the deltas, i.e., the deviations from the mean value, for each Obs inside the structure.",
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"items": {
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"$ref": "#/$defs/deltas_items"
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}
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}
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}
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},
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"deltas_items": {
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"type": "array",
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"description": "First entry is the configuration number. Each further entry is the delta, i.e., the deviation from the mean value, for one Obs inside the structure.",
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"prefixItems": [{
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"type": "integer"
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}],
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"items": [{
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"type": "number"
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}]
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},
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"cdata_items": {
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"type": "object",
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"description": "Contains the data for one covariance matrix.",
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"required": [
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"id",
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"layout",
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"cov",
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"grad"
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],
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"properties": {
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"id": {
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"type": "string",
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"description": "The identifier of the covariance matrix."
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},
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"layout": {
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"type": "string",
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"description": "The layout of the NxN covariance matrix",
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"examples": [
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"1, 1", "2, 2"
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]
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},
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"cov": {
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"type": "array",
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"description": "Contains the NxN covariance matrix, stored in row-major format.",
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"items": [{
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"type": "number"
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}]
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},
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"grad": {
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"type": "array",
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"description": "The gradient of all Obs inside the structure with respect to the corresponding (diagonal) elements of the covariance matrix.",
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"items": [{
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"type": "array",
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"description": "The gradient of all Obs with respect to the Ith element of the covariance matrix, where I is the position of this array inside grad.",
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"items": [{
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"type": "number"
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}]
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}]
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}
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}
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}
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},
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"examples": [
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{
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"program": "pyerrors 2.0.0+dev",
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"version": "1.0",
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"who": "s-kuberski",
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"date": "2022-02-16 12:59:09 +0100",
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"host": "Hostname",
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"obsdata": [
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{
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"type": "Obs",
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"layout": "1",
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"value": [
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1.0
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],
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"data": [
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{
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"id": "A",
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"replica": [
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{
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"name": "A|r1",
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"deltas": [
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[1, -4.579833517667820e-02],
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[2, 1.272532469141094e-01],
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[3, -7.042514710393744e-02],
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[4, -4.800967024769492e-01],
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[5, 2.967284377711763e-01],
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[6, 3.156118966788146e-01],
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[7, 1.139599354351861e-02],
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[8, -1.546693901500542e-01]
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]
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},
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{
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"name": "A|r2",
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"deltas": [
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[1, 2.003189752235817e-01],
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[2, 1.456782186748891e-01],
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[3, -2.417953154609670e-01],
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[4, 1.112557347812830e-01],
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[5, -6.889549539458262e-02],
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[6, 2.984543471692340e-01],
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[7, -4.874803852180309e-01],
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[8, 4.246392022459267e-02]
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]
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}
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]
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},
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{
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"id": "B",
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"replica": [
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{
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"name": "B|r1",
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"deltas": [
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[1, -2.726195322210824e-01],
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[2, 3.949288132215630e-01],
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[3, -2.832514721110847e-01],
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[4, -8.371015800402004e-02],
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[5, 2.643463355004773e-01],
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[6, -2.265154600267616e-02],
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[7, -1.954084091845127e-01],
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[8, 1.983659688013363e-01]
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]
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}
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]
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}
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],
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"cdata": [
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{
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"id": "#renorm",
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"layout": "2, 2",
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"cov": [1.000000000000000e-01, 5.000000000000000e-02, 5.000000000000000e-02, 2.000000000000000e-02],
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"grad": [
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[1.000000000000000e+00],
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[0.000000000000000e+00]
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]
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}
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]
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},
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{
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"type": "List",
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"layout": "2",
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"value": [
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1.2,
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0.8333333333333334
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],
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"data": [
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{
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"id": "B",
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"replica": [
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{
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"name": "B|r1",
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"deltas": [
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[1, 2.368958758731594e-01, 1.645110249119163e-01],
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[2, 3.164596213857241e-01, 2.197636259623084e-01],
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[3, -2.422021289001151e-01, -1.681959228473022e-01],
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[4, 1.365207560473117e-01, 9.480608058841092e-02],
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[5, -1.958565486752142e-02, -1.360114921355654e-02],
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[6, -6.335145310374894e-01, -4.399406465538122e-01],
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[7, 1.945374561549609e-02, 1.350954556631673e-02],
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[8, 1.859723158834354e-01, 1.291474415857190e-01]
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]
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}
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]
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}
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],
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"cdata": [
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{
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"id": "renorm",
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"layout": "2, 2",
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"cov": [1.000000000000000e-01, 5.000000000000000e-02, 5.000000000000000e-02, 2.000000000000000e-02],
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"grad": [
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[1.000000000000000e+00, -6.944444444444444e-01],
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[0.000000000000000e+00, 0.000000000000000e+00]
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]
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}
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]
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}
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]
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}
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]
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}
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