mirror of https://github.com/fjosw/pyerrors.git synced 2025-10-26 05:15:46 +01:00

Error propagation and statistical analysis for Markov chain Monte Carlo simulations in lattice QCD and statistical mechanics using autograd

autocorrelation autograd automatic-differentiation condensed-matter correlation data-analysis error-propagation lattice-field-theory lattice-qcd markov-chain monte-carlo particle-physics physics python qcd statistical-analysis statistical-mechanics

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Justus Kuhlmann 41fec09816 Impr/fix refactor sfcf read (#164 ) * refactor read_sfcf * adding tests for find_corr and read_compact_file * add necessary broken data for tests * fixed appended mode reading * factored out sort_names and find_files * now also using sort_files in sfcf.py * edited tests to fit with new structure * added find_files function * shifted helpfunctions to bottom of file * removed some debug lines * linting * Fixed requested changes, added silent mode * added Exception if correlator is not found by read_append_rep * use tmp_path fixture * linting silent keyword * try to fix testing for a_bb * tests: Exception testing in test_find_corr made more explicit. --------- Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>		2023-03-15 17:46:12 +00:00
.github	build: bug report default title changed again.	2023-03-11 21:38:29 +00:00
examples	docs: version guard added to combined fit example.	2023-03-09 13:38:51 +00:00
pyerrors	Impr/fix refactor sfcf read (#164 )	2023-03-15 17:46:12 +00:00
tests	Impr/fix refactor sfcf read (#164 )	2023-03-15 17:46:12 +00:00
.gitignore	build: extract version number in setup.py from version.py	2022-06-14 12:02:43 +01:00
CHANGELOG.md	docs: CHANGELOG updated.	2023-02-07 13:07:48 +00:00
CITATION.cff	docs: CHANGELOG and CITATION file updated.	2022-10-13 12:08:54 +01:00
conftest.py	tests: conftest.py added	2022-01-20 13:56:56 +00:00
CONTRIBUTING.md	docs: CONTRIBUTING.md extended.	2023-03-10 14:37:50 +00:00
LICENSE	Initial public release	2020-10-13 16:53:00 +02:00
pyproject.toml	build: pyproject.toml added.	2022-08-01 16:43:19 +01:00
README.md	docs: README updated.	2023-03-14 14:27:51 +00:00
setup.py	build: minimal numpy version bumped to 1.21 as 1.20 runs out of support	2023-01-23 16:23:09 +00:00

README.md

pyerrors

pyerrors is a python framework for error computation and propagation of Markov chain Monte Carlo data from lattice field theory and statistical mechanics simulations.

Documentation: https://fjosw.github.io/pyerrors/pyerrors.html
Examples: https://github.com/fjosw/pyerrors/tree/develop/examples
Bug reports: https://github.com/fjosw/pyerrors/issues

Installation

Install the most recent release using pip and pypi:

pip install pyerrors     # Fresh install
pip install -U pyerrors  # Update

Install the most recent release using conda and conda-forge:

conda install -c conda-forge pyerrors  # Fresh install
conda update -c conda-forge pyerrors   # Update

Contributing

We appreciate all contributions to the code, the documentation and the examples. If you want to get involved please have a look at our contribution guideline.