<!doctype html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="generator" content="pdoc 15.0.1"/>
<title>pyerrors.input.json API documentation</title>
<style>/*! * Bootstrap Reboot v5.0.0 (https://getbootstrap.com/) * Copyright 2011-2021 The Bootstrap Authors * Copyright 2011-2021 Twitter, Inc. * Licensed under MIT (https://github.com/twbs/bootstrap/blob/main/LICENSE) * Forked from Normalize.css, licensed MIT (https://github.com/necolas/normalize.css/blob/master/LICENSE.md) */*,::after,::before{box-sizing:border-box}@media (prefers-reduced-motion:no-preference){:root{scroll-behavior:smooth}}body{margin:0;font-family:system-ui,-apple-system,"Segoe UI",Roboto,"Helvetica Neue",Arial,"Noto Sans","Liberation Sans",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";font-size:1rem;font-weight:400;line-height:1.5;color:#212529;background-color:#fff;-webkit-text-size-adjust:100%;-webkit-tap-highlight-color:transparent}hr{margin:1rem 0;color:inherit;background-color:currentColor;border:0;opacity:.25}hr:not([size]){height:1px}h1,h2,h3,h4,h5,h6{margin-top:0;margin-bottom:.5rem;font-weight:500;line-height:1.2}h1{font-size:calc(1.375rem + 1.5vw)}@media (min-width:1200px){h1{font-size:2.5rem}}h2{font-size:calc(1.325rem + .9vw)}@media (min-width:1200px){h2{font-size:2rem}}h3{font-size:calc(1.3rem + .6vw)}@media (min-width:1200px){h3{font-size:1.75rem}}h4{font-size:calc(1.275rem + .3vw)}@media (min-width:1200px){h4{font-size:1.5rem}}h5{font-size:1.25rem}h6{font-size:1rem}p{margin-top:0;margin-bottom:1rem}abbr[data-bs-original-title],abbr[title]{-webkit-text-decoration:underline dotted;text-decoration:underline dotted;cursor:help;-webkit-text-decoration-skip-ink:none;text-decoration-skip-ink:none}address{margin-bottom:1rem;font-style:normal;line-height:inherit}ol,ul{padding-left:2rem}dl,ol,ul{margin-top:0;margin-bottom:1rem}ol ol,ol ul,ul ol,ul ul{margin-bottom:0}dt{font-weight:700}dd{margin-bottom:.5rem;margin-left:0}blockquote{margin:0 0 1rem}b,strong{font-weight:bolder}small{font-size:.875em}mark{padding:.2em;background-color:#fcf8e3}sub,sup{position:relative;font-size:.75em;line-height:0;vertical-align:baseline}sub{bottom:-.25em}sup{top:-.5em}a{color:#0d6efd;text-decoration:underline}a:hover{color:#0a58ca}a:not([href]):not([class]),a:not([href]):not([class]):hover{color:inherit;text-decoration:none}code,kbd,pre,samp{font-family:SFMono-Regular,Menlo,Monaco,Consolas,"Liberation Mono","Courier New",monospace;font-size:1em;direction:ltr;unicode-bidi:bidi-override}pre{display:block;margin-top:0;margin-bottom:1rem;overflow:auto;font-size:.875em}pre code{font-size:inherit;color:inherit;word-break:normal}code{font-size:.875em;color:#d63384;word-wrap:break-word}a>code{color:inherit}kbd{padding:.2rem .4rem;font-size:.875em;color:#fff;background-color:#212529;border-radius:.2rem}kbd kbd{padding:0;font-size:1em;font-weight:700}figure{margin:0 0 1rem}img,svg{vertical-align:middle}table{caption-side:bottom;border-collapse:collapse}caption{padding-top:.5rem;padding-bottom:.5rem;color:#6c757d;text-align:left}th{text-align:inherit;text-align:-webkit-match-parent}tbody,td,tfoot,th,thead,tr{border-color:inherit;border-style:solid;border-width:0}label{display:inline-block}button{border-radius:0}button:focus:not(:focus-visible){outline:0}button,input,optgroup,select,textarea{margin:0;font-family:inherit;font-size:inherit;line-height:inherit}button,select{text-transform:none}[role=button]{cursor:pointer}select{word-wrap:normal}select:disabled{opacity:1}[list]::-webkit-calendar-picker-indicator{display:none}[type=button],[type=reset],[type=submit],button{-webkit-appearance:button}[type=button]:not(:disabled),[type=reset]:not(:disabled),[type=submit]:not(:disabled),button:not(:disabled){cursor:pointer}::-moz-focus-inner{padding:0;border-style:none}textarea{resize:vertical}fieldset{min-width:0;padding:0;margin:0;border:0}legend{float:left;width:100%;padding:0;margin-bottom:.5rem;font-size:calc(1.275rem + .3vw);line-height:inherit}@media (min-width:1200px){legend{font-size:1.5rem}}legend+*{clear:left}::-webkit-datetime-edit-day-field,::-webkit-datetime-edit-fields-wrapper,::-webkit-datetime-edit-hour-field,::-webkit-datetime-edit-minute,::-webkit-datetime-edit-month-field,::-webkit-datetime-edit-text,::-webkit-datetime-edit-year-field{padding:0}::-webkit-inner-spin-button{height:auto}[type=search]{outline-offset:-2px;-webkit-appearance:textfield}::-webkit-search-decoration{-webkit-appearance:none}::-webkit-color-swatch-wrapper{padding:0}::file-selector-button{font:inherit}::-webkit-file-upload-button{font:inherit;-webkit-appearance:button}output{display:inline-block}iframe{border:0}summary{display:list-item;cursor:pointer}progress{vertical-align:baseline}[hidden]{display:none!important}</style>
<style>/*! syntax-highlighting.css */pre{line-height:125%;}span.linenos{color:inherit; background-color:transparent; padding-left:5px; padding-right:20px;}.pdoc-code .hll{background-color:#ffffcc}.pdoc-code{background:#f8f8f8;}.pdoc-code .c{color:#3D7B7B; font-style:italic}.pdoc-code .err{border:1px solid #FF0000}.pdoc-code .k{color:#008000; font-weight:bold}.pdoc-code .o{color:#666666}.pdoc-code .ch{color:#3D7B7B; font-style:italic}.pdoc-code .cm{color:#3D7B7B; font-style:italic}.pdoc-code .cp{color:#9C6500}.pdoc-code .cpf{color:#3D7B7B; font-style:italic}.pdoc-code .c1{color:#3D7B7B; font-style:italic}.pdoc-code .cs{color:#3D7B7B; font-style:italic}.pdoc-code .gd{color:#A00000}.pdoc-code .ge{font-style:italic}.pdoc-code .gr{color:#E40000}.pdoc-code .gh{color:#000080; font-weight:bold}.pdoc-code .gi{color:#008400}.pdoc-code .go{color:#717171}.pdoc-code .gp{color:#000080; font-weight:bold}.pdoc-code .gs{font-weight:bold}.pdoc-code .gu{color:#800080; font-weight:bold}.pdoc-code .gt{color:#0044DD}.pdoc-code .kc{color:#008000; font-weight:bold}.pdoc-code .kd{color:#008000; font-weight:bold}.pdoc-code .kn{color:#008000; font-weight:bold}.pdoc-code .kp{color:#008000}.pdoc-code .kr{color:#008000; font-weight:bold}.pdoc-code .kt{color:#B00040}.pdoc-code .m{color:#666666}.pdoc-code .s{color:#BA2121}.pdoc-code .na{color:#687822}.pdoc-code .nb{color:#008000}.pdoc-code .nc{color:#0000FF; font-weight:bold}.pdoc-code .no{color:#880000}.pdoc-code .nd{color:#AA22FF}.pdoc-code .ni{color:#717171; font-weight:bold}.pdoc-code .ne{color:#CB3F38; font-weight:bold}.pdoc-code .nf{color:#0000FF}.pdoc-code .nl{color:#767600}.pdoc-code .nn{color:#0000FF; font-weight:bold}.pdoc-code .nt{color:#008000; font-weight:bold}.pdoc-code .nv{color:#19177C}.pdoc-code .ow{color:#AA22FF; font-weight:bold}.pdoc-code .w{color:#bbbbbb}.pdoc-code .mb{color:#666666}.pdoc-code .mf{color:#666666}.pdoc-code .mh{color:#666666}.pdoc-code .mi{color:#666666}.pdoc-code .mo{color:#666666}.pdoc-code .sa{color:#BA2121}.pdoc-code .sb{color:#BA2121}.pdoc-code .sc{color:#BA2121}.pdoc-code .dl{color:#BA2121}.pdoc-code .sd{color:#BA2121; font-style:italic}.pdoc-code .s2{color:#BA2121}.pdoc-code .se{color:#AA5D1F; font-weight:bold}.pdoc-code .sh{color:#BA2121}.pdoc-code .si{color:#A45A77; font-weight:bold}.pdoc-code .sx{color:#008000}.pdoc-code .sr{color:#A45A77}.pdoc-code .s1{color:#BA2121}.pdoc-code .ss{color:#19177C}.pdoc-code .bp{color:#008000}.pdoc-code .fm{color:#0000FF}.pdoc-code .vc{color:#19177C}.pdoc-code .vg{color:#19177C}.pdoc-code .vi{color:#19177C}.pdoc-code .vm{color:#19177C}.pdoc-code .il{color:#666666}</style>
<style>/*! theme.css */:root{--pdoc-background:#fff;}.pdoc{--text:#212529;--muted:#6c757d;--link:#3660a5;--link-hover:#1659c5;--code:#f8f8f8;--active:#fff598;--accent:#eee;--accent2:#c1c1c1;--nav-hover:rgba(255, 255, 255, 0.5);--name:#0066BB;--def:#008800;--annotation:#007020;}</style>
<style>/*! layout.css */html, body{width:100%;height:100%;}html, main{scroll-behavior:smooth;}body{background-color:var(--pdoc-background);}@media (max-width:769px){#navtoggle{cursor:pointer;position:absolute;width:50px;height:40px;top:1rem;right:1rem;border-color:var(--text);color:var(--text);display:flex;opacity:0.8;z-index:999;}#navtoggle:hover{opacity:1;}#togglestate + div{display:none;}#togglestate:checked + div{display:inherit;}main, header{padding:2rem 3vw;}header + main{margin-top:-3rem;}.git-button{display:none !important;}nav input[type="search"]{max-width:77%;}nav input[type="search"]:first-child{margin-top:-6px;}nav input[type="search"]:valid ~ *{display:none !important;}}@media (min-width:770px){:root{--sidebar-width:clamp(12.5rem, 28vw, 22rem);}nav{position:fixed;overflow:auto;height:100vh;width:var(--sidebar-width);}main, header{padding:3rem 2rem 3rem calc(var(--sidebar-width) + 3rem);width:calc(54rem + var(--sidebar-width));max-width:100%;}header + main{margin-top:-4rem;}#navtoggle{display:none;}}#togglestate{position:absolute;height:0;opacity:0;}nav.pdoc{--pad:clamp(0.5rem, 2vw, 1.75rem);--indent:1.5rem;background-color:var(--accent);border-right:1px solid var(--accent2);box-shadow:0 0 20px rgba(50, 50, 50, .2) inset;padding:0 0 0 var(--pad);overflow-wrap:anywhere;scrollbar-width:thin; scrollbar-color:var(--accent2) transparent; z-index:1}nav.pdoc::-webkit-scrollbar{width:.4rem; }nav.pdoc::-webkit-scrollbar-thumb{background-color:var(--accent2); }nav.pdoc > div{padding:var(--pad) 0;}nav.pdoc .module-list-button{display:inline-flex;align-items:center;color:var(--text);border-color:var(--muted);margin-bottom:1rem;}nav.pdoc .module-list-button:hover{border-color:var(--text);}nav.pdoc input[type=search]{display:block;outline-offset:0;width:calc(100% - var(--pad));}nav.pdoc .logo{max-width:calc(100% - var(--pad));max-height:35vh;display:block;margin:0 auto 1rem;transform:translate(calc(-.5 * var(--pad)), 0);}nav.pdoc ul{list-style:none;padding-left:0;}nav.pdoc > div > ul{margin-left:calc(0px - var(--pad));}nav.pdoc li a{padding:.2rem 0 .2rem calc(var(--pad) + var(--indent));}nav.pdoc > div > ul > li > a{padding-left:var(--pad);}nav.pdoc li{transition:all 100ms;}nav.pdoc li:hover{background-color:var(--nav-hover);}nav.pdoc a, nav.pdoc a:hover{color:var(--text);}nav.pdoc a{display:block;}nav.pdoc > h2:first-of-type{margin-top:1.5rem;}nav.pdoc .class:before{content:"class ";color:var(--muted);}nav.pdoc .function:after{content:"()";color:var(--muted);}nav.pdoc footer:before{content:"";display:block;width:calc(100% - var(--pad));border-top:solid var(--accent2) 1px;margin-top:1.5rem;padding-top:.5rem;}nav.pdoc footer{font-size:small;}</style>
<style>/*! content.css */.pdoc{color:var(--text);box-sizing:border-box;line-height:1.5;background:none;}.pdoc .pdoc-button{cursor:pointer;display:inline-block;border:solid black 1px;border-radius:2px;font-size:.75rem;padding:calc(0.5em - 1px) 1em;transition:100ms all;}.pdoc .alert{padding:1rem 1rem 1rem calc(1.5rem + 24px);border:1px solid transparent;border-radius:.25rem;background-repeat:no-repeat;background-position:.75rem center;margin-bottom:1rem;}.pdoc .alert > em{display:none;}.pdoc .alert > *:last-child{margin-bottom:0;}.pdoc .alert.note {color:#084298;background-color:#cfe2ff;border-color:#b6d4fe;background-image:url("data:image/svg+xml,%3Csvg%20xmlns%3D%22http%3A//www.w3.org/2000/svg%22%20width%3D%2224%22%20height%3D%2224%22%20fill%3D%22%23084298%22%20viewBox%3D%220%200%2016%2016%22%3E%3Cpath%20d%3D%22M8%2016A8%208%200%201%200%208%200a8%208%200%200%200%200%2016zm.93-9.412-1%204.705c-.07.34.029.533.304.533.194%200%20.487-.07.686-.246l-.088.416c-.287.346-.92.598-1.465.598-.703%200-1.002-.422-.808-1.319l.738-3.468c.064-.293.006-.399-.287-.47l-.451-.081.082-.381%202.29-.287zM8%205.5a1%201%200%201%201%200-2%201%201%200%200%201%200%202z%22/%3E%3C/svg%3E");}.pdoc .alert.warning{color:#664d03;background-color:#fff3cd;border-color:#ffecb5;background-image:url("data:image/svg+xml,%3Csvg%20xmlns%3D%22http%3A//www.w3.org/2000/svg%22%20width%3D%2224%22%20height%3D%2224%22%20fill%3D%22%23664d03%22%20viewBox%3D%220%200%2016%2016%22%3E%3Cpath%20d%3D%22M8.982%201.566a1.13%201.13%200%200%200-1.96%200L.165%2013.233c-.457.778.091%201.767.98%201.767h13.713c.889%200%201.438-.99.98-1.767L8.982%201.566zM8%205c.535%200%20.954.462.9.995l-.35%203.507a.552.552%200%200%201-1.1%200L7.1%205.995A.905.905%200%200%201%208%205zm.002%206a1%201%200%201%201%200%202%201%201%200%200%201%200-2z%22/%3E%3C/svg%3E");}.pdoc .alert.danger{color:#842029;background-color:#f8d7da;border-color:#f5c2c7;background-image:url("data:image/svg+xml,%3Csvg%20xmlns%3D%22http%3A//www.w3.org/2000/svg%22%20width%3D%2224%22%20height%3D%2224%22%20fill%3D%22%23842029%22%20viewBox%3D%220%200%2016%2016%22%3E%3Cpath%20d%3D%22M5.52.359A.5.5%200%200%201%206%200h4a.5.5%200%200%201%20.474.658L8.694%206H12.5a.5.5%200%200%201%20.395.807l-7%209a.5.5%200%200%201-.873-.454L6.823%209.5H3.5a.5.5%200%200%201-.48-.641l2.5-8.5z%22/%3E%3C/svg%3E");}.pdoc .visually-hidden{position:absolute !important;width:1px !important;height:1px !important;padding:0 !important;margin:-1px !important;overflow:hidden !important;clip:rect(0, 0, 0, 0) !important;white-space:nowrap !important;border:0 !important;}.pdoc h1, .pdoc h2, .pdoc h3{font-weight:300;margin:.3em 0;padding:.2em 0;}.pdoc > section:not(.module-info) h1{font-size:1.5rem;font-weight:500;}.pdoc > section:not(.module-info) h2{font-size:1.4rem;font-weight:500;}.pdoc > section:not(.module-info) h3{font-size:1.3rem;font-weight:500;}.pdoc > section:not(.module-info) h4{font-size:1.2rem;}.pdoc > section:not(.module-info) h5{font-size:1.1rem;}.pdoc a{text-decoration:none;color:var(--link);}.pdoc a:hover{color:var(--link-hover);}.pdoc blockquote{margin-left:2rem;}.pdoc pre{border-top:1px solid var(--accent2);border-bottom:1px solid var(--accent2);margin-top:0;margin-bottom:1em;padding:.5rem 0 .5rem .5rem;overflow-x:auto;background-color:var(--code);}.pdoc code{color:var(--text);padding:.2em .4em;margin:0;font-size:85%;background-color:var(--accent);border-radius:6px;}.pdoc a > code{color:inherit;}.pdoc pre > code{display:inline-block;font-size:inherit;background:none;border:none;padding:0;}.pdoc > section:not(.module-info){margin-bottom:1.5rem;}.pdoc .modulename{margin-top:0;font-weight:bold;}.pdoc .modulename a{color:var(--link);transition:100ms all;}.pdoc .git-button{float:right;border:solid var(--link) 1px;}.pdoc .git-button:hover{background-color:var(--link);color:var(--pdoc-background);}.view-source-toggle-state,.view-source-toggle-state ~ .pdoc-code{display:none;}.view-source-toggle-state:checked ~ .pdoc-code{display:block;}.view-source-button{display:inline-block;float:right;font-size:.75rem;line-height:1.5rem;color:var(--muted);padding:0 .4rem 0 1.3rem;cursor:pointer;text-indent:-2px;}.view-source-button > span{visibility:hidden;}.module-info .view-source-button{float:none;display:flex;justify-content:flex-end;margin:-1.2rem .4rem -.2rem 0;}.view-source-button::before{position:absolute;content:"View Source";display:list-item;list-style-type:disclosure-closed;}.view-source-toggle-state:checked ~ .attr .view-source-button::before,.view-source-toggle-state:checked ~ .view-source-button::before{list-style-type:disclosure-open;}.pdoc .docstring{margin-bottom:1.5rem;}.pdoc section:not(.module-info) .docstring{margin-left:clamp(0rem, 5vw - 2rem, 1rem);}.pdoc .docstring .pdoc-code{margin-left:1em;margin-right:1em;}.pdoc h1:target,.pdoc h2:target,.pdoc h3:target,.pdoc h4:target,.pdoc h5:target,.pdoc h6:target,.pdoc .pdoc-code > pre > span:target{background-color:var(--active);box-shadow:-1rem 0 0 0 var(--active);}.pdoc .pdoc-code > pre > span:target{display:block;}.pdoc div:target > .attr,.pdoc section:target > .attr,.pdoc dd:target > a{background-color:var(--active);}.pdoc *{scroll-margin:2rem;}.pdoc .pdoc-code .linenos{user-select:none;}.pdoc .attr:hover{filter:contrast(0.95);}.pdoc section, .pdoc .classattr{position:relative;}.pdoc .headerlink{--width:clamp(1rem, 3vw, 2rem);position:absolute;top:0;left:calc(0rem - var(--width));transition:all 100ms ease-in-out;opacity:0;}.pdoc .headerlink::before{content:"#";display:block;text-align:center;width:var(--width);height:2.3rem;line-height:2.3rem;font-size:1.5rem;}.pdoc .attr:hover ~ .headerlink,.pdoc *:target > .headerlink,.pdoc .headerlink:hover{opacity:1;}.pdoc .attr{display:block;margin:.5rem 0 .5rem;padding:.4rem .4rem .4rem 1rem;background-color:var(--accent);overflow-x:auto;}.pdoc .classattr{margin-left:2rem;}.pdoc .decorator-deprecated{color:#842029;}.pdoc .decorator-deprecated ~ span{filter:grayscale(1) opacity(0.8);}.pdoc .name{color:var(--name);font-weight:bold;}.pdoc .def{color:var(--def);font-weight:bold;}.pdoc .signature{background-color:transparent;}.pdoc .param, .pdoc .return-annotation{white-space:pre;}.pdoc .signature.multiline .param{display:block;}.pdoc .signature.condensed .param{display:inline-block;}.pdoc .annotation{color:var(--annotation);}.pdoc .view-value-toggle-state,.pdoc .view-value-toggle-state ~ .default_value{display:none;}.pdoc .view-value-toggle-state:checked ~ .default_value{display:inherit;}.pdoc .view-value-button{font-size:.5rem;vertical-align:middle;border-style:dashed;margin-top:-0.1rem;}.pdoc .view-value-button:hover{background:white;}.pdoc .view-value-button::before{content:"show";text-align:center;width:2.2em;display:inline-block;}.pdoc .view-value-toggle-state:checked ~ .view-value-button::before{content:"hide";}.pdoc .inherited{margin-left:2rem;}.pdoc .inherited dt{font-weight:700;}.pdoc .inherited dt, .pdoc .inherited dd{display:inline;margin-left:0;margin-bottom:.5rem;}.pdoc .inherited dd:not(:last-child):after{content:", ";}.pdoc .inherited .class:before{content:"class ";}.pdoc .inherited .function a:after{content:"()";}.pdoc .search-result .docstring{overflow:auto;max-height:25vh;}.pdoc .search-result.focused > .attr{background-color:var(--active);}.pdoc .attribution{margin-top:2rem;display:block;opacity:0.5;transition:all 200ms;filter:grayscale(100%);}.pdoc .attribution:hover{opacity:1;filter:grayscale(0%);}.pdoc .attribution img{margin-left:5px;height:35px;vertical-align:middle;width:70px;transition:all 200ms;}.pdoc table{display:block;width:max-content;max-width:100%;overflow:auto;margin-bottom:1rem;}.pdoc table th{font-weight:600;}.pdoc table th, .pdoc table td{padding:6px 13px;border:1px solid var(--accent2);}</style>
<style>/*! custom.css */</style><script>
window.MathJax = {
tex: {
inlineMath: [['$', '$'], ['\\(', '\\)']]
}
};
</script>
<script id="MathJax-script" async src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
<script>
/* Re-invoke MathJax when DOM content changes, for example during search. */
document.addEventListener("DOMContentLoaded", () => {
new MutationObserver(() => MathJax.typeset()).observe(
document.querySelector("main.pdoc").parentNode,
{childList: true}
);
})
</script>
<style>
mjx-container {
overflow-x: auto;
overflow-y: hidden;
}
</style></head>
<body>
<nav class="pdoc">
<label id="navtoggle" for="togglestate" class="pdoc-button"><svg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 30 30'><path stroke-linecap='round' stroke="currentColor" stroke-miterlimit='10' stroke-width='2' d='M4 7h22M4 15h22M4 23h22'/></svg></label>
<input id="togglestate" type="checkbox" aria-hidden="true" tabindex="-1">
<div> <a class="pdoc-button module-list-button" href="../input.html">
<svg xmlns="http://www.w3.org/2000/svg" width="16" height="16" fill="currentColor" class="bi bi-box-arrow-in-left" viewBox="0 0 16 16">
<path fill-rule="evenodd" d="M10 3.5a.5.5 0 0 0-.5-.5h-8a.5.5 0 0 0-.5.5v9a.5.5 0 0 0 .5.5h8a.5.5 0 0 0 .5-.5v-2a.5.5 0 0 1 1 0v2A1.5 1.5 0 0 1 9.5 14h-8A1.5 1.5 0 0 1 0 12.5v-9A1.5 1.5 0 0 1 1.5 2h8A1.5 1.5 0 0 1 11 3.5v2a.5.5 0 0 1-1 0v-2z"/>
<path fill-rule="evenodd" d="M4.146 8.354a.5.5 0 0 1 0-.708l3-3a.5.5 0 1 1 .708.708L5.707 7.5H14.5a.5.5 0 0 1 0 1H5.707l2.147 2.146a.5.5 0 0 1-.708.708l-3-3z"/>
</svg> pyerrors.input</a>
<input type="search" placeholder="Search..." role="searchbox" aria-label="search"
pattern=".+" required>
<h2>API Documentation</h2>
<ul class="memberlist">
<li>
<a class="function" href="#create_json_string">create_json_string</a>
</li>
<li>
<a class="function" href="#dump_to_json">dump_to_json</a>
</li>
<li>
<a class="function" href="#import_json_string">import_json_string</a>
</li>
<li>
<a class="function" href="#load_json">load_json</a>
</li>
<li>
<a class="function" href="#dump_dict_to_json">dump_dict_to_json</a>
</li>
<li>
<a class="function" href="#load_json_dict">load_json_dict</a>
</li>
</ul>
<a class="attribution" title="pdoc: Python API documentation generator" href="https://pdoc.dev" target="_blank">
built with <span class="visually-hidden">pdoc</span><img
alt="pdoc logo"
src="data:image/svg+xml,%3Csvg%20xmlns%3D%22http%3A//www.w3.org/2000/svg%22%20role%3D%22img%22%20aria-label%3D%22pdoc%20logo%22%20width%3D%22300%22%20height%3D%22150%22%20viewBox%3D%22-1%200%2060%2030%22%3E%3Ctitle%3Epdoc%3C/title%3E%3Cpath%20d%3D%22M29.621%2021.293c-.011-.273-.214-.475-.511-.481a.5.5%200%200%200-.489.503l-.044%201.393c-.097.551-.695%201.215-1.566%201.704-.577.428-1.306.486-2.193.182-1.426-.617-2.467-1.654-3.304-2.487l-.173-.172a3.43%203.43%200%200%200-.365-.306.49.49%200%200%200-.286-.196c-1.718-1.06-4.931-1.47-7.353.191l-.219.15c-1.707%201.187-3.413%202.131-4.328%201.03-.02-.027-.49-.685-.141-1.763.233-.721.546-2.408.772-4.076.042-.09.067-.187.046-.288.166-1.347.277-2.625.241-3.351%201.378-1.008%202.271-2.586%202.271-4.362%200-.976-.272-1.935-.788-2.774-.057-.094-.122-.18-.184-.268.033-.167.052-.339.052-.516%200-1.477-1.202-2.679-2.679-2.679-.791%200-1.496.352-1.987.9a6.3%206.3%200%200%200-1.001.029c-.492-.564-1.207-.929-2.012-.929-1.477%200-2.679%201.202-2.679%202.679A2.65%202.65%200%200%200%20.97%206.554c-.383.747-.595%201.572-.595%202.41%200%202.311%201.507%204.29%203.635%205.107-.037.699-.147%202.27-.423%203.294l-.137.461c-.622%202.042-2.515%208.257%201.727%2010.643%201.614.908%203.06%201.248%204.317%201.248%202.665%200%204.492-1.524%205.322-2.401%201.476-1.559%202.886-1.854%206.491.82%201.877%201.393%203.514%201.753%204.861%201.068%202.223-1.713%202.811-3.867%203.399-6.374.077-.846.056-1.469.054-1.537zm-4.835%204.313c-.054.305-.156.586-.242.629-.034-.007-.131-.022-.307-.157-.145-.111-.314-.478-.456-.908.221.121.432.25.675.355.115.039.219.051.33.081zm-2.251-1.238c-.05.33-.158.648-.252.694-.022.001-.125-.018-.307-.157-.217-.166-.488-.906-.639-1.573.358.344.754.693%201.198%201.036zm-3.887-2.337c-.006-.116-.018-.231-.041-.342.635.145%201.189.368%201.599.625.097.231.166.481.174.642-.03.049-.055.101-.067.158-.046.013-.128.026-.298.004-.278-.037-.901-.57-1.367-1.087zm-1.127-.497c.116.306.176.625.12.71-.019.014-.117.045-.345.016-.206-.027-.604-.332-.986-.695.41-.051.816-.056%201.211-.031zm-4.535%201.535c.209.22.379.47.358.598-.006.041-.088.138-.351.234-.144.055-.539-.063-.979-.259a11.66%2011.66%200%200%200%20.972-.573zm.983-.664c.359-.237.738-.418%201.126-.554.25.237.479.548.457.694-.006.042-.087.138-.351.235-.174.064-.694-.105-1.232-.375zm-3.381%201.794c-.022.145-.061.29-.149.401-.133.166-.358.248-.69.251h-.002c-.133%200-.306-.26-.45-.621.417.091.854.07%201.291-.031zm-2.066-8.077a4.78%204.78%200%200%201-.775-.584c.172-.115.505-.254.88-.378l-.105.962zm-.331%202.302a10.32%2010.32%200%200%201-.828-.502c.202-.143.576-.328.984-.49l-.156.992zm-.45%202.157l-.701-.403c.214-.115.536-.249.891-.376a11.57%2011.57%200%200%201-.19.779zm-.181%201.716c.064.398.194.702.298.893-.194-.051-.435-.162-.736-.398.061-.119.224-.3.438-.495zM8.87%204.141c0%20.152-.123.276-.276.276s-.275-.124-.275-.276.123-.276.276-.276.275.124.275.276zm-.735-.389a1.15%201.15%200%200%200-.314.783%201.16%201.16%200%200%200%201.162%201.162c.457%200%20.842-.27%201.032-.653.026.117.042.238.042.362a1.68%201.68%200%200%201-1.679%201.679%201.68%201.68%200%200%201-1.679-1.679c0-.843.626-1.535%201.436-1.654zM5.059%205.406A1.68%201.68%200%200%201%203.38%207.085a1.68%201.68%200%200%201-1.679-1.679c0-.037.009-.072.011-.109.21.3.541.508.935.508a1.16%201.16%200%200%200%201.162-1.162%201.14%201.14%200%200%200-.474-.912c.015%200%20.03-.005.045-.005.926.001%201.679.754%201.679%201.68zM3.198%204.141c0%20.152-.123.276-.276.276s-.275-.124-.275-.276.123-.276.276-.276.275.124.275.276zM1.375%208.964c0-.52.103-1.035.288-1.52.466.394%201.06.64%201.717.64%201.144%200%202.116-.725%202.499-1.738.383%201.012%201.355%201.738%202.499%201.738.867%200%201.631-.421%202.121-1.062.307.605.478%201.267.478%201.942%200%202.486-2.153%204.51-4.801%204.51s-4.801-2.023-4.801-4.51zm24.342%2019.349c-.985.498-2.267.168-3.813-.979-3.073-2.281-5.453-3.199-7.813-.705-1.315%201.391-4.163%203.365-8.423.97-3.174-1.786-2.239-6.266-1.261-9.479l.146-.492c.276-1.02.395-2.457.444-3.268a6.11%206.11%200%200%200%201.18.115%206.01%206.01%200%200%200%202.536-.562l-.006.175c-.802.215-1.848.612-2.021%201.25-.079.295.021.601.274.837.219.203.415.364.598.501-.667.304-1.243.698-1.311%201.179-.02.144-.022.507.393.787.213.144.395.26.564.365-1.285.521-1.361.96-1.381%201.126-.018.142-.011.496.427.746l.854.489c-.473.389-.971.914-.999%201.429-.018.278.095.532.316.713.675.556%201.231.721%201.653.721.059%200%20.104-.014.158-.02.207.707.641%201.64%201.513%201.64h.013c.8-.008%201.236-.345%201.462-.626.173-.216.268-.457.325-.692.424.195.93.374%201.372.374.151%200%20.294-.021.423-.068.732-.27.944-.704.993-1.021.009-.061.003-.119.002-.179.266.086.538.147.789.147.15%200%20.294-.021.423-.069.542-.2.797-.489.914-.754.237.147.478.258.704.288.106.014.205.021.296.021.356%200%20.595-.101.767-.229.438.435%201.094.992%201.656%201.067.106.014.205.021.296.021a1.56%201.56%200%200%200%20.323-.035c.17.575.453%201.289.866%201.605.358.273.665.362.914.362a.99.99%200%200%200%20.421-.093%201.03%201.03%200%200%200%20.245-.164c.168.428.39.846.68%201.068.358.273.665.362.913.362a.99.99%200%200%200%20.421-.093c.317-.148.512-.448.639-.762.251.157.495.257.726.257.127%200%20.25-.024.37-.071.427-.17.706-.617.841-1.314.022-.015.047-.022.068-.038.067-.051.133-.104.196-.159-.443%201.486-1.107%202.761-2.086%203.257zM8.66%209.925a.5.5%200%201%200-1%200c0%20.653-.818%201.205-1.787%201.205s-1.787-.552-1.787-1.205a.5.5%200%201%200-1%200c0%201.216%201.25%202.205%202.787%202.205s2.787-.989%202.787-2.205zm4.4%2015.965l-.208.097c-2.661%201.258-4.708%201.436-6.086.527-1.542-1.017-1.88-3.19-1.844-4.198a.4.4%200%200%200-.385-.414c-.242-.029-.406.164-.414.385-.046%201.249.367%203.686%202.202%204.896.708.467%201.547.7%202.51.7%201.248%200%202.706-.392%204.362-1.174l.185-.086a.4.4%200%200%200%20.205-.527c-.089-.204-.326-.291-.527-.206zM9.547%202.292c.093.077.205.114.317.114a.5.5%200%200%200%20.318-.886L8.817.397a.5.5%200%200%200-.703.068.5.5%200%200%200%20.069.703l1.364%201.124zm-7.661-.065c.086%200%20.173-.022.253-.068l1.523-.893a.5.5%200%200%200-.506-.863l-1.523.892a.5.5%200%200%200-.179.685c.094.158.261.247.432.247z%22%20transform%3D%22matrix%28-1%200%200%201%2058%200%29%22%20fill%3D%22%233bb300%22/%3E%3Cpath%20d%3D%22M.3%2021.86V10.18q0-.46.02-.68.04-.22.18-.5.28-.54%201.34-.54%201.06%200%201.42.28.38.26.44.78.76-1.04%202.38-1.04%201.64%200%203.1%201.54%201.46%201.54%201.46%203.58%200%202.04-1.46%203.58-1.44%201.54-3.08%201.54-1.64%200-2.38-.92v4.04q0%20.46-.04.68-.02.22-.18.5-.14.3-.5.42-.36.12-.98.12-.62%200-1-.12-.36-.12-.52-.4-.14-.28-.18-.5-.02-.22-.02-.68zm3.96-9.42q-.46.54-.46%201.18%200%20.64.46%201.18.48.52%201.2.52.74%200%201.24-.52.52-.52.52-1.18%200-.66-.48-1.18-.48-.54-1.26-.54-.76%200-1.22.54zm14.741-8.36q.16-.3.54-.42.38-.12%201-.12.64%200%201.02.12.38.12.52.42.16.3.18.54.04.22.04.68v11.94q0%20.46-.04.7-.02.22-.18.5-.3.54-1.7.54-1.38%200-1.54-.98-.84.96-2.34.96-1.8%200-3.28-1.56-1.48-1.58-1.48-3.66%200-2.1%201.48-3.68%201.5-1.58%203.28-1.58%201.48%200%202.3%201v-4.2q0-.46.02-.68.04-.24.18-.52zm-3.24%2010.86q.52.54%201.26.54.74%200%201.22-.54.5-.54.5-1.18%200-.66-.48-1.22-.46-.56-1.26-.56-.8%200-1.28.56-.48.54-.48%201.2%200%20.66.52%201.2zm7.833-1.2q0-2.4%201.68-3.96%201.68-1.56%203.84-1.56%202.16%200%203.82%201.56%201.66%201.54%201.66%203.94%200%201.66-.86%202.96-.86%201.28-2.1%201.9-1.22.6-2.54.6-1.32%200-2.56-.64-1.24-.66-2.1-1.92-.84-1.28-.84-2.88zm4.18%201.44q.64.48%201.3.48.66%200%201.32-.5.66-.5.66-1.48%200-.98-.62-1.46-.62-.48-1.34-.48-.72%200-1.34.5-.62.5-.62%201.48%200%20.96.64%201.46zm11.412-1.44q0%20.84.56%201.32.56.46%201.18.46.64%200%201.18-.36.56-.38.9-.38.6%200%201.46%201.06.46.58.46%201.04%200%20.76-1.1%201.42-1.14.8-2.8.8-1.86%200-3.58-1.34-.82-.64-1.34-1.7-.52-1.08-.52-2.36%200-1.3.52-2.34.52-1.06%201.34-1.7%201.66-1.32%203.54-1.32.76%200%201.48.22.72.2%201.06.4l.32.2q.36.24.56.38.52.4.52.92%200%20.5-.42%201.14-.72%201.1-1.38%201.1-.38%200-1.08-.44-.36-.34-1.04-.34-.66%200-1.24.48-.58.48-.58%201.34z%22%20fill%3D%22green%22/%3E%3C/svg%3E"/>
</a>
</div>
</nav>
<main class="pdoc">
<section class="module-info">
<h1 class="modulename">
<a href="./../../pyerrors.html">pyerrors</a><wbr>.<a href="./../input.html">input</a><wbr>.json </h1>
<input id="mod-json-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<label class="view-source-button" for="mod-json-view-source"><span>View Source</span></label>
<div class="pdoc-code codehilite"><pre><span></span><span id="L-1"><a href="#L-1"><span class="linenos"> 1</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">rapidjson</span><span class="w"> </span><span class="k">as</span><span class="w"> </span><span class="nn">json</span>
</span><span id="L-2"><a href="#L-2"><span class="linenos"> 2</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">gzip</span>
</span><span id="L-3"><a href="#L-3"><span class="linenos"> 3</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">getpass</span>
</span><span id="L-4"><a href="#L-4"><span class="linenos"> 4</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">socket</span>
</span><span id="L-5"><a href="#L-5"><span class="linenos"> 5</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">datetime</span>
</span><span id="L-6"><a href="#L-6"><span class="linenos"> 6</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">platform</span>
</span><span id="L-7"><a href="#L-7"><span class="linenos"> 7</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">warnings</span>
</span><span id="L-8"><a href="#L-8"><span class="linenos"> 8</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">re</span>
</span><span id="L-9"><a href="#L-9"><span class="linenos"> 9</span></a><span class="kn">import</span><span class="w"> </span><span class="nn">numpy</span><span class="w"> </span><span class="k">as</span><span class="w"> </span><span class="nn">np</span>
</span><span id="L-10"><a href="#L-10"><span class="linenos"> 10</span></a><span class="kn">from</span><span class="w"> </span><span class="nn">..obs</span><span class="w"> </span><span class="kn">import</span> <span class="n">Obs</span>
</span><span id="L-11"><a href="#L-11"><span class="linenos"> 11</span></a><span class="kn">from</span><span class="w"> </span><span class="nn">..covobs</span><span class="w"> </span><span class="kn">import</span> <span class="n">Covobs</span>
</span><span id="L-12"><a href="#L-12"><span class="linenos"> 12</span></a><span class="kn">from</span><span class="w"> </span><span class="nn">..correlators</span><span class="w"> </span><span class="kn">import</span> <span class="n">Corr</span>
</span><span id="L-13"><a href="#L-13"><span class="linenos"> 13</span></a><span class="kn">from</span><span class="w"> </span><span class="nn">..misc</span><span class="w"> </span><span class="kn">import</span> <span class="n">_assert_equal_properties</span>
</span><span id="L-14"><a href="#L-14"><span class="linenos"> 14</span></a><span class="kn">from</span><span class="w"> </span><span class="nn">..</span><span class="w"> </span><span class="kn">import</span> <span class="n">version</span> <span class="k">as</span> <span class="n">pyerrorsversion</span>
</span><span id="L-15"><a href="#L-15"><span class="linenos"> 15</span></a>
</span><span id="L-16"><a href="#L-16"><span class="linenos"> 16</span></a>
</span><span id="L-17"><a href="#L-17"><span class="linenos"> 17</span></a><span class="k">def</span><span class="w"> </span><span class="nf">create_json_string</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="s1">''</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="mi">1</span><span class="p">):</span>
</span><span id="L-18"><a href="#L-18"><span class="linenos"> 18</span></a><span class="w"> </span><span class="sd">"""Generate the string for the export of a list of Obs or structures containing Obs</span>
</span><span id="L-19"><a href="#L-19"><span class="linenos"> 19</span></a><span class="sd"> to a .json(.gz) file</span>
</span><span id="L-20"><a href="#L-20"><span class="linenos"> 20</span></a>
</span><span id="L-21"><a href="#L-21"><span class="linenos"> 21</span></a><span class="sd"> Parameters</span>
</span><span id="L-22"><a href="#L-22"><span class="linenos"> 22</span></a><span class="sd"> ----------</span>
</span><span id="L-23"><a href="#L-23"><span class="linenos"> 23</span></a><span class="sd"> ol : list</span>
</span><span id="L-24"><a href="#L-24"><span class="linenos"> 24</span></a><span class="sd"> List of objects that will be exported. At the moment, these objects can be</span>
</span><span id="L-25"><a href="#L-25"><span class="linenos"> 25</span></a><span class="sd"> either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="L-26"><a href="#L-26"><span class="linenos"> 26</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="L-27"><a href="#L-27"><span class="linenos"> 27</span></a><span class="sd"> description : str</span>
</span><span id="L-28"><a href="#L-28"><span class="linenos"> 28</span></a><span class="sd"> Optional string that describes the contents of the json file.</span>
</span><span id="L-29"><a href="#L-29"><span class="linenos"> 29</span></a><span class="sd"> indent : int</span>
</span><span id="L-30"><a href="#L-30"><span class="linenos"> 30</span></a><span class="sd"> Specify the indentation level of the json file. None or 0 is permissible and</span>
</span><span id="L-31"><a href="#L-31"><span class="linenos"> 31</span></a><span class="sd"> saves disk space.</span>
</span><span id="L-32"><a href="#L-32"><span class="linenos"> 32</span></a>
</span><span id="L-33"><a href="#L-33"><span class="linenos"> 33</span></a><span class="sd"> Returns</span>
</span><span id="L-34"><a href="#L-34"><span class="linenos"> 34</span></a><span class="sd"> -------</span>
</span><span id="L-35"><a href="#L-35"><span class="linenos"> 35</span></a><span class="sd"> json_string : str</span>
</span><span id="L-36"><a href="#L-36"><span class="linenos"> 36</span></a><span class="sd"> String for export to .json(.gz) file</span>
</span><span id="L-37"><a href="#L-37"><span class="linenos"> 37</span></a><span class="sd"> """</span>
</span><span id="L-38"><a href="#L-38"><span class="linenos"> 38</span></a>
</span><span id="L-39"><a href="#L-39"><span class="linenos"> 39</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_gen_data_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">):</span>
</span><span id="L-40"><a href="#L-40"><span class="linenos"> 40</span></a> <span class="n">dl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-41"><a href="#L-41"><span class="linenos"> 41</span></a> <span class="n">No</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-42"><a href="#L-42"><span class="linenos"> 42</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">mc_names</span><span class="p">:</span>
</span><span id="L-43"><a href="#L-43"><span class="linenos"> 43</span></a> <span class="n">ed</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-44"><a href="#L-44"><span class="linenos"> 44</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'id'</span><span class="p">]</span> <span class="o">=</span> <span class="n">name</span>
</span><span id="L-45"><a href="#L-45"><span class="linenos"> 45</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'replica'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-46"><a href="#L-46"><span class="linenos"> 46</span></a> <span class="k">for</span> <span class="n">r_name</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">e_content</span><span class="p">[</span><span class="n">name</span><span class="p">]:</span>
</span><span id="L-47"><a href="#L-47"><span class="linenos"> 47</span></a> <span class="n">rd</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-48"><a href="#L-48"><span class="linenos"> 48</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'name'</span><span class="p">]</span> <span class="o">=</span> <span class="n">r_name</span>
</span><span id="L-49"><a href="#L-49"><span class="linenos"> 49</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-50"><a href="#L-50"><span class="linenos"> 50</span></a> <span class="n">offsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">r_values</span><span class="p">[</span><span class="n">r_name</span><span class="p">]</span> <span class="o">-</span> <span class="n">o</span><span class="o">.</span><span class="n">value</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="L-51"><a href="#L-51"><span class="linenos"> 51</span></a> <span class="n">deltas</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">column_stack</span><span class="p">([</span><span class="n">ol</span><span class="p">[</span><span class="n">oi</span><span class="p">]</span><span class="o">.</span><span class="n">deltas</span><span class="p">[</span><span class="n">r_name</span><span class="p">]</span> <span class="o">+</span> <span class="n">offsets</span><span class="p">[</span><span class="n">oi</span><span class="p">]</span> <span class="k">for</span> <span class="n">oi</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">No</span><span class="p">)])</span>
</span><span id="L-52"><a href="#L-52"><span class="linenos"> 52</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">idl</span><span class="p">[</span><span class="n">r_name</span><span class="p">])):</span>
</span><span id="L-53"><a href="#L-53"><span class="linenos"> 53</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">idl</span><span class="p">[</span><span class="n">r_name</span><span class="p">][</span><span class="n">i</span><span class="p">]])</span>
</span><span id="L-54"><a href="#L-54"><span class="linenos"> 54</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+=</span> <span class="n">deltas</span><span class="p">[</span><span class="n">i</span><span class="p">]</span><span class="o">.</span><span class="n">tolist</span><span class="p">()</span>
</span><span id="L-55"><a href="#L-55"><span class="linenos"> 55</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'replica'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">rd</span><span class="p">)</span>
</span><span id="L-56"><a href="#L-56"><span class="linenos"> 56</span></a> <span class="n">dl</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">ed</span><span class="p">)</span>
</span><span id="L-57"><a href="#L-57"><span class="linenos"> 57</span></a> <span class="k">return</span> <span class="n">dl</span>
</span><span id="L-58"><a href="#L-58"><span class="linenos"> 58</span></a>
</span><span id="L-59"><a href="#L-59"><span class="linenos"> 59</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_gen_cdata_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">):</span>
</span><span id="L-60"><a href="#L-60"><span class="linenos"> 60</span></a> <span class="n">dl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-61"><a href="#L-61"><span class="linenos"> 61</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">cov_names</span><span class="p">:</span>
</span><span id="L-62"><a href="#L-62"><span class="linenos"> 62</span></a> <span class="n">ed</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-63"><a href="#L-63"><span class="linenos"> 63</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'id'</span><span class="p">]</span> <span class="o">=</span> <span class="n">name</span>
</span><span id="L-64"><a href="#L-64"><span class="linenos"> 64</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">cov</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span><span class="o">.</span><span class="n">lstrip</span><span class="p">(</span><span class="s1">'('</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">')'</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">','</span><span class="p">)</span>
</span><span id="L-65"><a href="#L-65"><span class="linenos"> 65</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'cov'</span><span class="p">]</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">ravel</span><span class="p">(</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">cov</span><span class="p">))</span>
</span><span id="L-66"><a href="#L-66"><span class="linenos"> 66</span></a> <span class="n">ncov</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">cov</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
</span><span id="L-67"><a href="#L-67"><span class="linenos"> 67</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-68"><a href="#L-68"><span class="linenos"> 68</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">ncov</span><span class="p">):</span>
</span><span id="L-69"><a href="#L-69"><span class="linenos"> 69</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">([])</span>
</span><span id="L-70"><a href="#L-70"><span class="linenos"> 70</span></a> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">:</span>
</span><span id="L-71"><a href="#L-71"><span class="linenos"> 71</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">grad</span><span class="p">[</span><span class="n">i</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span>
</span><span id="L-72"><a href="#L-72"><span class="linenos"> 72</span></a> <span class="n">dl</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">ed</span><span class="p">)</span>
</span><span id="L-73"><a href="#L-73"><span class="linenos"> 73</span></a> <span class="k">return</span> <span class="n">dl</span>
</span><span id="L-74"><a href="#L-74"><span class="linenos"> 74</span></a>
</span><span id="L-75"><a href="#L-75"><span class="linenos"> 75</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_Obs_to_dict</span><span class="p">(</span><span class="n">o</span><span class="p">):</span>
</span><span id="L-76"><a href="#L-76"><span class="linenos"> 76</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-77"><a href="#L-77"><span class="linenos"> 77</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'Obs'</span>
</span><span id="L-78"><a href="#L-78"><span class="linenos"> 78</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'1'</span>
</span><span id="L-79"><a href="#L-79"><span class="linenos"> 79</span></a> <span class="k">if</span> <span class="n">o</span><span class="o">.</span><span class="n">tag</span><span class="p">:</span>
</span><span id="L-80"><a href="#L-80"><span class="linenos"> 80</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">tag</span><span class="p">]</span>
</span><span id="L-81"><a href="#L-81"><span class="linenos"> 81</span></a> <span class="k">if</span> <span class="n">o</span><span class="o">.</span><span class="n">reweighted</span><span class="p">:</span>
</span><span id="L-82"><a href="#L-82"><span class="linenos"> 82</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'reweighted'</span><span class="p">]</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="L-83"><a href="#L-83"><span class="linenos"> 83</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">value</span><span class="p">]</span>
</span><span id="L-84"><a href="#L-84"><span class="linenos"> 84</span></a> <span class="n">data</span> <span class="o">=</span> <span class="n">_gen_data_d_from_list</span><span class="p">([</span><span class="n">o</span><span class="p">])</span>
</span><span id="L-85"><a href="#L-85"><span class="linenos"> 85</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-86"><a href="#L-86"><span class="linenos"> 86</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'data'</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span>
</span><span id="L-87"><a href="#L-87"><span class="linenos"> 87</span></a> <span class="n">cdata</span> <span class="o">=</span> <span class="n">_gen_cdata_d_from_list</span><span class="p">([</span><span class="n">o</span><span class="p">])</span>
</span><span id="L-88"><a href="#L-88"><span class="linenos"> 88</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">cdata</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-89"><a href="#L-89"><span class="linenos"> 89</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'cdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">cdata</span>
</span><span id="L-90"><a href="#L-90"><span class="linenos"> 90</span></a> <span class="k">return</span> <span class="n">d</span>
</span><span id="L-91"><a href="#L-91"><span class="linenos"> 91</span></a>
</span><span id="L-92"><a href="#L-92"><span class="linenos"> 92</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_List_to_dict</span><span class="p">(</span><span class="n">ol</span><span class="p">):</span>
</span><span id="L-93"><a href="#L-93"><span class="linenos"> 93</span></a> <span class="n">_assert_equal_properties</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-94"><a href="#L-94"><span class="linenos"> 94</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-95"><a href="#L-95"><span class="linenos"> 95</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'List'</span>
</span><span id="L-96"><a href="#L-96"><span class="linenos"> 96</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'</span><span class="si">%d</span><span class="s1">'</span> <span class="o">%</span> <span class="nb">len</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-97"><a href="#L-97"><span class="linenos"> 97</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">tag</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="L-98"><a href="#L-98"><span class="linenos"> 98</span></a> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">any</span><span class="p">([</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="k">for</span> <span class="n">tag</span> <span class="ow">in</span> <span class="n">taglist</span><span class="p">]):</span>
</span><span id="L-99"><a href="#L-99"><span class="linenos"> 99</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span>
</span><span id="L-100"><a href="#L-100"><span class="linenos">100</span></a> <span class="k">if</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span><span class="p">:</span>
</span><span id="L-101"><a href="#L-101"><span class="linenos">101</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'reweighted'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="L-102"><a href="#L-102"><span class="linenos">102</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">value</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="L-103"><a href="#L-103"><span class="linenos">103</span></a> <span class="n">data</span> <span class="o">=</span> <span class="n">_gen_data_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-104"><a href="#L-104"><span class="linenos">104</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-105"><a href="#L-105"><span class="linenos">105</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'data'</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span>
</span><span id="L-106"><a href="#L-106"><span class="linenos">106</span></a> <span class="n">cdata</span> <span class="o">=</span> <span class="n">_gen_cdata_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-107"><a href="#L-107"><span class="linenos">107</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">cdata</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-108"><a href="#L-108"><span class="linenos">108</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'cdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">cdata</span>
</span><span id="L-109"><a href="#L-109"><span class="linenos">109</span></a> <span class="k">return</span> <span class="n">d</span>
</span><span id="L-110"><a href="#L-110"><span class="linenos">110</span></a>
</span><span id="L-111"><a href="#L-111"><span class="linenos">111</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_Array_to_dict</span><span class="p">(</span><span class="n">oa</span><span class="p">):</span>
</span><span id="L-112"><a href="#L-112"><span class="linenos">112</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">ravel</span><span class="p">(</span><span class="n">oa</span><span class="p">)</span>
</span><span id="L-113"><a href="#L-113"><span class="linenos">113</span></a> <span class="n">_assert_equal_properties</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-114"><a href="#L-114"><span class="linenos">114</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-115"><a href="#L-115"><span class="linenos">115</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'Array'</span>
</span><span id="L-116"><a href="#L-116"><span class="linenos">116</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">oa</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span><span class="o">.</span><span class="n">lstrip</span><span class="p">(</span><span class="s1">'('</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">')'</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">','</span><span class="p">)</span>
</span><span id="L-117"><a href="#L-117"><span class="linenos">117</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">tag</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="L-118"><a href="#L-118"><span class="linenos">118</span></a> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">any</span><span class="p">([</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="k">for</span> <span class="n">tag</span> <span class="ow">in</span> <span class="n">taglist</span><span class="p">]):</span>
</span><span id="L-119"><a href="#L-119"><span class="linenos">119</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span>
</span><span id="L-120"><a href="#L-120"><span class="linenos">120</span></a> <span class="k">if</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span><span class="p">:</span>
</span><span id="L-121"><a href="#L-121"><span class="linenos">121</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'reweighted'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="L-122"><a href="#L-122"><span class="linenos">122</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">value</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="L-123"><a href="#L-123"><span class="linenos">123</span></a> <span class="n">data</span> <span class="o">=</span> <span class="n">_gen_data_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-124"><a href="#L-124"><span class="linenos">124</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-125"><a href="#L-125"><span class="linenos">125</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'data'</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span>
</span><span id="L-126"><a href="#L-126"><span class="linenos">126</span></a> <span class="n">cdata</span> <span class="o">=</span> <span class="n">_gen_cdata_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="L-127"><a href="#L-127"><span class="linenos">127</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">cdata</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-128"><a href="#L-128"><span class="linenos">128</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'cdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">cdata</span>
</span><span id="L-129"><a href="#L-129"><span class="linenos">129</span></a> <span class="k">return</span> <span class="n">d</span>
</span><span id="L-130"><a href="#L-130"><span class="linenos">130</span></a>
</span><span id="L-131"><a href="#L-131"><span class="linenos">131</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_nan_Obs_like</span><span class="p">(</span><span class="n">obs</span><span class="p">):</span>
</span><span id="L-132"><a href="#L-132"><span class="linenos">132</span></a> <span class="n">samples</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-133"><a href="#L-133"><span class="linenos">133</span></a> <span class="n">names</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-134"><a href="#L-134"><span class="linenos">134</span></a> <span class="n">idl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-135"><a href="#L-135"><span class="linenos">135</span></a> <span class="k">for</span> <span class="n">key</span><span class="p">,</span> <span class="n">value</span> <span class="ow">in</span> <span class="n">obs</span><span class="o">.</span><span class="n">idl</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
</span><span id="L-136"><a href="#L-136"><span class="linenos">136</span></a> <span class="n">samples</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="n">np</span><span class="o">.</span><span class="n">nan</span><span class="p">]</span> <span class="o">*</span> <span class="nb">len</span><span class="p">(</span><span class="n">value</span><span class="p">)))</span>
</span><span id="L-137"><a href="#L-137"><span class="linenos">137</span></a> <span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">key</span><span class="p">)</span>
</span><span id="L-138"><a href="#L-138"><span class="linenos">138</span></a> <span class="n">idl</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">value</span><span class="p">)</span>
</span><span id="L-139"><a href="#L-139"><span class="linenos">139</span></a> <span class="n">my_obs</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">(</span><span class="n">samples</span><span class="p">,</span> <span class="n">names</span><span class="p">,</span> <span class="n">idl</span><span class="p">,</span> <span class="n">means</span><span class="o">=</span><span class="p">[</span><span class="n">np</span><span class="o">.</span><span class="n">nan</span> <span class="k">for</span> <span class="n">n</span> <span class="ow">in</span> <span class="n">names</span><span class="p">])</span>
</span><span id="L-140"><a href="#L-140"><span class="linenos">140</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
</span><span id="L-141"><a href="#L-141"><span class="linenos">141</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">_covobs</span> <span class="o">=</span> <span class="n">obs</span><span class="o">.</span><span class="n">_covobs</span>
</span><span id="L-142"><a href="#L-142"><span class="linenos">142</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">obs</span><span class="o">.</span><span class="n">_covobs</span><span class="p">:</span>
</span><span id="L-143"><a href="#L-143"><span class="linenos">143</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">name</span><span class="p">)</span>
</span><span id="L-144"><a href="#L-144"><span class="linenos">144</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">reweighted</span> <span class="o">=</span> <span class="n">obs</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="L-145"><a href="#L-145"><span class="linenos">145</span></a> <span class="k">return</span> <span class="n">my_obs</span>
</span><span id="L-146"><a href="#L-146"><span class="linenos">146</span></a>
</span><span id="L-147"><a href="#L-147"><span class="linenos">147</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_Corr_to_dict</span><span class="p">(</span><span class="n">my_corr</span><span class="p">):</span>
</span><span id="L-148"><a href="#L-148"><span class="linenos">148</span></a> <span class="n">first_not_none</span> <span class="o">=</span> <span class="nb">next</span><span class="p">(</span><span class="n">i</span> <span class="k">for</span> <span class="n">i</span><span class="p">,</span> <span class="n">j</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">my_corr</span><span class="o">.</span><span class="n">content</span><span class="p">)</span> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">all</span><span class="p">(</span><span class="n">j</span><span class="p">))</span>
</span><span id="L-149"><a href="#L-149"><span class="linenos">149</span></a> <span class="n">dummy_array</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">empty</span><span class="p">((</span><span class="n">my_corr</span><span class="o">.</span><span class="n">N</span><span class="p">,</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">N</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">object</span><span class="p">)</span>
</span><span id="L-150"><a href="#L-150"><span class="linenos">150</span></a> <span class="n">dummy_array</span><span class="p">[:]</span> <span class="o">=</span> <span class="n">_nan_Obs_like</span><span class="p">(</span><span class="n">my_corr</span><span class="o">.</span><span class="n">content</span><span class="p">[</span><span class="n">first_not_none</span><span class="p">]</span><span class="o">.</span><span class="n">ravel</span><span class="p">()[</span><span class="mi">0</span><span class="p">])</span>
</span><span id="L-151"><a href="#L-151"><span class="linenos">151</span></a> <span class="n">content</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span> <span class="k">if</span> <span class="n">o</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="k">else</span> <span class="n">dummy_array</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">content</span><span class="p">]</span>
</span><span id="L-152"><a href="#L-152"><span class="linenos">152</span></a> <span class="n">dat</span> <span class="o">=</span> <span class="n">write_Array_to_dict</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">(</span><span class="n">content</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">object</span><span class="p">))</span>
</span><span id="L-153"><a href="#L-153"><span class="linenos">153</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'Corr'</span>
</span><span id="L-154"><a href="#L-154"><span class="linenos">154</span></a> <span class="n">corr_meta_data</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">my_corr</span><span class="o">.</span><span class="n">tag</span><span class="p">)</span>
</span><span id="L-155"><a href="#L-155"><span class="linenos">155</span></a> <span class="k">if</span> <span class="s1">'tag'</span> <span class="ow">in</span> <span class="n">dat</span><span class="o">.</span><span class="n">keys</span><span class="p">():</span>
</span><span id="L-156"><a href="#L-156"><span class="linenos">156</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">corr_meta_data</span><span class="p">)</span>
</span><span id="L-157"><a href="#L-157"><span class="linenos">157</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-158"><a href="#L-158"><span class="linenos">158</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">corr_meta_data</span><span class="p">]</span>
</span><span id="L-159"><a href="#L-159"><span class="linenos">159</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span>
</span><span id="L-160"><a href="#L-160"><span class="linenos">160</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="p">{}</span> <span class="c1"># tag is now a dictionary, that contains the previous taglist in the key "tag"</span>
</span><span id="L-161"><a href="#L-161"><span class="linenos">161</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">][</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span>
</span><span id="L-162"><a href="#L-162"><span class="linenos">162</span></a> <span class="k">if</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">prange</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
</span><span id="L-163"><a href="#L-163"><span class="linenos">163</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">][</span><span class="s1">'prange'</span><span class="p">]</span> <span class="o">=</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">prange</span>
</span><span id="L-164"><a href="#L-164"><span class="linenos">164</span></a> <span class="k">return</span> <span class="n">dat</span>
</span><span id="L-165"><a href="#L-165"><span class="linenos">165</span></a>
</span><span id="L-166"><a href="#L-166"><span class="linenos">166</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="L-167"><a href="#L-167"><span class="linenos">167</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="p">[</span><span class="n">ol</span><span class="p">]</span>
</span><span id="L-168"><a href="#L-168"><span class="linenos">168</span></a>
</span><span id="L-169"><a href="#L-169"><span class="linenos">169</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-170"><a href="#L-170"><span class="linenos">170</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'program'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'pyerrors </span><span class="si">%s</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">pyerrorsversion</span><span class="o">.</span><span class="n">__version__</span><span class="p">)</span>
</span><span id="L-171"><a href="#L-171"><span class="linenos">171</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'version'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'1.1'</span>
</span><span id="L-172"><a href="#L-172"><span class="linenos">172</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'who'</span><span class="p">]</span> <span class="o">=</span> <span class="n">getpass</span><span class="o">.</span><span class="n">getuser</span><span class="p">()</span>
</span><span id="L-173"><a href="#L-173"><span class="linenos">173</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">datetime</span><span class="o">.</span><span class="n">now</span><span class="p">()</span><span class="o">.</span><span class="n">astimezone</span><span class="p">()</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y-%m-</span><span class="si">%d</span><span class="s1"> %H:%M:%S %z'</span><span class="p">)</span>
</span><span id="L-174"><a href="#L-174"><span class="linenos">174</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'host'</span><span class="p">]</span> <span class="o">=</span> <span class="n">socket</span><span class="o">.</span><span class="n">gethostname</span><span class="p">()</span> <span class="o">+</span> <span class="s1">', '</span> <span class="o">+</span> <span class="n">platform</span><span class="o">.</span><span class="n">platform</span><span class="p">()</span>
</span><span id="L-175"><a href="#L-175"><span class="linenos">175</span></a>
</span><span id="L-176"><a href="#L-176"><span class="linenos">176</span></a> <span class="k">if</span> <span class="n">description</span><span class="p">:</span>
</span><span id="L-177"><a href="#L-177"><span class="linenos">177</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'description'</span><span class="p">]</span> <span class="o">=</span> <span class="n">description</span>
</span><span id="L-178"><a href="#L-178"><span class="linenos">178</span></a>
</span><span id="L-179"><a href="#L-179"><span class="linenos">179</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-180"><a href="#L-180"><span class="linenos">180</span></a> <span class="k">for</span> <span class="n">io</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">:</span>
</span><span id="L-181"><a href="#L-181"><span class="linenos">181</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="n">Obs</span><span class="p">):</span>
</span><span id="L-182"><a href="#L-182"><span class="linenos">182</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_Obs_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-183"><a href="#L-183"><span class="linenos">183</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="L-184"><a href="#L-184"><span class="linenos">184</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_List_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-185"><a href="#L-185"><span class="linenos">185</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
</span><span id="L-186"><a href="#L-186"><span class="linenos">186</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_Array_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-187"><a href="#L-187"><span class="linenos">187</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="n">Corr</span><span class="p">):</span>
</span><span id="L-188"><a href="#L-188"><span class="linenos">188</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_Corr_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-189"><a href="#L-189"><span class="linenos">189</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-190"><a href="#L-190"><span class="linenos">190</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Unkown datatype."</span><span class="p">)</span>
</span><span id="L-191"><a href="#L-191"><span class="linenos">191</span></a>
</span><span id="L-192"><a href="#L-192"><span class="linenos">192</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_jsonifier</span><span class="p">(</span><span class="n">obj</span><span class="p">):</span>
</span><span id="L-193"><a href="#L-193"><span class="linenos">193</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-194"><a href="#L-194"><span class="linenos">194</span></a> <span class="n">result</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-195"><a href="#L-195"><span class="linenos">195</span></a> <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">obj</span><span class="p">:</span>
</span><span id="L-196"><a href="#L-196"><span class="linenos">196</span></a> <span class="k">if</span> <span class="n">key</span> <span class="ow">is</span> <span class="kc">True</span><span class="p">:</span>
</span><span id="L-197"><a href="#L-197"><span class="linenos">197</span></a> <span class="n">result</span><span class="p">[</span><span class="s1">'true'</span><span class="p">]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="L-198"><a href="#L-198"><span class="linenos">198</span></a> <span class="k">elif</span> <span class="n">key</span> <span class="ow">is</span> <span class="kc">False</span><span class="p">:</span>
</span><span id="L-199"><a href="#L-199"><span class="linenos">199</span></a> <span class="n">result</span><span class="p">[</span><span class="s1">'false'</span><span class="p">]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="L-200"><a href="#L-200"><span class="linenos">200</span></a> <span class="k">elif</span> <span class="n">key</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
</span><span id="L-201"><a href="#L-201"><span class="linenos">201</span></a> <span class="n">result</span><span class="p">[</span><span class="s1">'null'</span><span class="p">]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="L-202"><a href="#L-202"><span class="linenos">202</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">key</span><span class="p">,</span> <span class="p">(</span><span class="nb">int</span><span class="p">,</span> <span class="nb">float</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">floating</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">integer</span><span class="p">)):</span>
</span><span id="L-203"><a href="#L-203"><span class="linenos">203</span></a> <span class="n">result</span><span class="p">[</span><span class="nb">str</span><span class="p">(</span><span class="n">key</span><span class="p">)]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="L-204"><a href="#L-204"><span class="linenos">204</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-205"><a href="#L-205"><span class="linenos">205</span></a> <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">'keys must be str, int, float, bool or None'</span><span class="p">)</span>
</span><span id="L-206"><a href="#L-206"><span class="linenos">206</span></a> <span class="k">return</span> <span class="n">result</span>
</span><span id="L-207"><a href="#L-207"><span class="linenos">207</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">integer</span><span class="p">):</span>
</span><span id="L-208"><a href="#L-208"><span class="linenos">208</span></a> <span class="k">return</span> <span class="nb">int</span><span class="p">(</span><span class="n">obj</span><span class="p">)</span>
</span><span id="L-209"><a href="#L-209"><span class="linenos">209</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">floating</span><span class="p">):</span>
</span><span id="L-210"><a href="#L-210"><span class="linenos">210</span></a> <span class="k">return</span> <span class="nb">float</span><span class="p">(</span><span class="n">obj</span><span class="p">)</span>
</span><span id="L-211"><a href="#L-211"><span class="linenos">211</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-212"><a href="#L-212"><span class="linenos">212</span></a> <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">'</span><span class="si">%r</span><span class="s1"> is not JSON serializable'</span> <span class="o">%</span> <span class="p">(</span><span class="n">obj</span><span class="p">,))</span>
</span><span id="L-213"><a href="#L-213"><span class="linenos">213</span></a>
</span><span id="L-214"><a href="#L-214"><span class="linenos">214</span></a> <span class="k">if</span> <span class="n">indent</span><span class="p">:</span>
</span><span id="L-215"><a href="#L-215"><span class="linenos">215</span></a> <span class="k">return</span> <span class="n">json</span><span class="o">.</span><span class="n">dumps</span><span class="p">(</span><span class="n">d</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="n">indent</span><span class="p">,</span> <span class="n">ensure_ascii</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="n">_jsonifier</span><span class="p">,</span> <span class="n">write_mode</span><span class="o">=</span><span class="n">json</span><span class="o">.</span><span class="n">WM_SINGLE_LINE_ARRAY</span><span class="p">)</span>
</span><span id="L-216"><a href="#L-216"><span class="linenos">216</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-217"><a href="#L-217"><span class="linenos">217</span></a> <span class="k">return</span> <span class="n">json</span><span class="o">.</span><span class="n">dumps</span><span class="p">(</span><span class="n">d</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="n">indent</span><span class="p">,</span> <span class="n">ensure_ascii</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="n">_jsonifier</span><span class="p">,</span> <span class="n">write_mode</span><span class="o">=</span><span class="n">json</span><span class="o">.</span><span class="n">WM_COMPACT</span><span class="p">)</span>
</span><span id="L-218"><a href="#L-218"><span class="linenos">218</span></a>
</span><span id="L-219"><a href="#L-219"><span class="linenos">219</span></a>
</span><span id="L-220"><a href="#L-220"><span class="linenos">220</span></a><span class="k">def</span><span class="w"> </span><span class="nf">dump_to_json</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="s1">''</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
</span><span id="L-221"><a href="#L-221"><span class="linenos">221</span></a><span class="w"> </span><span class="sd">"""Export a list of Obs or structures containing Obs to a .json(.gz) file.</span>
</span><span id="L-222"><a href="#L-222"><span class="linenos">222</span></a><span class="sd"> Dict keys that are not JSON-serializable such as floats are converted to strings.</span>
</span><span id="L-223"><a href="#L-223"><span class="linenos">223</span></a>
</span><span id="L-224"><a href="#L-224"><span class="linenos">224</span></a><span class="sd"> Parameters</span>
</span><span id="L-225"><a href="#L-225"><span class="linenos">225</span></a><span class="sd"> ----------</span>
</span><span id="L-226"><a href="#L-226"><span class="linenos">226</span></a><span class="sd"> ol : list</span>
</span><span id="L-227"><a href="#L-227"><span class="linenos">227</span></a><span class="sd"> List of objects that will be exported. At the moment, these objects can be</span>
</span><span id="L-228"><a href="#L-228"><span class="linenos">228</span></a><span class="sd"> either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="L-229"><a href="#L-229"><span class="linenos">229</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="L-230"><a href="#L-230"><span class="linenos">230</span></a><span class="sd"> fname : str</span>
</span><span id="L-231"><a href="#L-231"><span class="linenos">231</span></a><span class="sd"> Filename of the output file.</span>
</span><span id="L-232"><a href="#L-232"><span class="linenos">232</span></a><span class="sd"> description : str</span>
</span><span id="L-233"><a href="#L-233"><span class="linenos">233</span></a><span class="sd"> Optional string that describes the contents of the json file.</span>
</span><span id="L-234"><a href="#L-234"><span class="linenos">234</span></a><span class="sd"> indent : int</span>
</span><span id="L-235"><a href="#L-235"><span class="linenos">235</span></a><span class="sd"> Specify the indentation level of the json file. None or 0 is permissible and</span>
</span><span id="L-236"><a href="#L-236"><span class="linenos">236</span></a><span class="sd"> saves disk space.</span>
</span><span id="L-237"><a href="#L-237"><span class="linenos">237</span></a><span class="sd"> gz : bool</span>
</span><span id="L-238"><a href="#L-238"><span class="linenos">238</span></a><span class="sd"> If True, the output is a gzipped json. If False, the output is a json file.</span>
</span><span id="L-239"><a href="#L-239"><span class="linenos">239</span></a>
</span><span id="L-240"><a href="#L-240"><span class="linenos">240</span></a><span class="sd"> Returns</span>
</span><span id="L-241"><a href="#L-241"><span class="linenos">241</span></a><span class="sd"> -------</span>
</span><span id="L-242"><a href="#L-242"><span class="linenos">242</span></a><span class="sd"> Null</span>
</span><span id="L-243"><a href="#L-243"><span class="linenos">243</span></a><span class="sd"> """</span>
</span><span id="L-244"><a href="#L-244"><span class="linenos">244</span></a>
</span><span id="L-245"><a href="#L-245"><span class="linenos">245</span></a> <span class="n">jsonstring</span> <span class="o">=</span> <span class="n">create_json_string</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">description</span><span class="p">,</span> <span class="n">indent</span><span class="p">)</span>
</span><span id="L-246"><a href="#L-246"><span class="linenos">246</span></a>
</span><span id="L-247"><a href="#L-247"><span class="linenos">247</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.json'</span><span class="p">)</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="L-248"><a href="#L-248"><span class="linenos">248</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.json'</span>
</span><span id="L-249"><a href="#L-249"><span class="linenos">249</span></a>
</span><span id="L-250"><a href="#L-250"><span class="linenos">250</span></a> <span class="k">if</span> <span class="n">gz</span><span class="p">:</span>
</span><span id="L-251"><a href="#L-251"><span class="linenos">251</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="L-252"><a href="#L-252"><span class="linenos">252</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.gz'</span>
</span><span id="L-253"><a href="#L-253"><span class="linenos">253</span></a>
</span><span id="L-254"><a href="#L-254"><span class="linenos">254</span></a> <span class="n">fp</span> <span class="o">=</span> <span class="n">gzip</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'wb'</span><span class="p">)</span>
</span><span id="L-255"><a href="#L-255"><span class="linenos">255</span></a> <span class="n">fp</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">jsonstring</span><span class="o">.</span><span class="n">encode</span><span class="p">(</span><span class="s1">'utf-8'</span><span class="p">))</span>
</span><span id="L-256"><a href="#L-256"><span class="linenos">256</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-257"><a href="#L-257"><span class="linenos">257</span></a> <span class="n">fp</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s1">'utf-8'</span><span class="p">)</span>
</span><span id="L-258"><a href="#L-258"><span class="linenos">258</span></a> <span class="n">fp</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">jsonstring</span><span class="p">)</span>
</span><span id="L-259"><a href="#L-259"><span class="linenos">259</span></a> <span class="n">fp</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
</span><span id="L-260"><a href="#L-260"><span class="linenos">260</span></a>
</span><span id="L-261"><a href="#L-261"><span class="linenos">261</span></a>
</span><span id="L-262"><a href="#L-262"><span class="linenos">262</span></a><span class="k">def</span><span class="w"> </span><span class="nf">_parse_json_dict</span><span class="p">(</span><span class="n">json_dict</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
</span><span id="L-263"><a href="#L-263"><span class="linenos">263</span></a><span class="w"> </span><span class="sd">"""Reconstruct a list of Obs or structures containing Obs from a dict that</span>
</span><span id="L-264"><a href="#L-264"><span class="linenos">264</span></a><span class="sd"> was built out of a json string.</span>
</span><span id="L-265"><a href="#L-265"><span class="linenos">265</span></a>
</span><span id="L-266"><a href="#L-266"><span class="linenos">266</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="L-267"><a href="#L-267"><span class="linenos">267</span></a><span class="sd"> If the list contains only one element, it is unpacked from the list.</span>
</span><span id="L-268"><a href="#L-268"><span class="linenos">268</span></a>
</span><span id="L-269"><a href="#L-269"><span class="linenos">269</span></a><span class="sd"> Parameters</span>
</span><span id="L-270"><a href="#L-270"><span class="linenos">270</span></a><span class="sd"> ----------</span>
</span><span id="L-271"><a href="#L-271"><span class="linenos">271</span></a><span class="sd"> json_string : str</span>
</span><span id="L-272"><a href="#L-272"><span class="linenos">272</span></a><span class="sd"> json string containing the data.</span>
</span><span id="L-273"><a href="#L-273"><span class="linenos">273</span></a><span class="sd"> verbose : bool</span>
</span><span id="L-274"><a href="#L-274"><span class="linenos">274</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="L-275"><a href="#L-275"><span class="linenos">275</span></a><span class="sd"> full_output : bool</span>
</span><span id="L-276"><a href="#L-276"><span class="linenos">276</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="L-277"><a href="#L-277"><span class="linenos">277</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="L-278"><a href="#L-278"><span class="linenos">278</span></a>
</span><span id="L-279"><a href="#L-279"><span class="linenos">279</span></a><span class="sd"> Returns</span>
</span><span id="L-280"><a href="#L-280"><span class="linenos">280</span></a><span class="sd"> -------</span>
</span><span id="L-281"><a href="#L-281"><span class="linenos">281</span></a><span class="sd"> result : list[Obs]</span>
</span><span id="L-282"><a href="#L-282"><span class="linenos">282</span></a><span class="sd"> reconstructed list of observables from the json string</span>
</span><span id="L-283"><a href="#L-283"><span class="linenos">283</span></a><span class="sd"> or</span>
</span><span id="L-284"><a href="#L-284"><span class="linenos">284</span></a><span class="sd"> result : Obs</span>
</span><span id="L-285"><a href="#L-285"><span class="linenos">285</span></a><span class="sd"> only one observable if the list only has one entry</span>
</span><span id="L-286"><a href="#L-286"><span class="linenos">286</span></a><span class="sd"> or</span>
</span><span id="L-287"><a href="#L-287"><span class="linenos">287</span></a><span class="sd"> result : dict</span>
</span><span id="L-288"><a href="#L-288"><span class="linenos">288</span></a><span class="sd"> if full_output=True</span>
</span><span id="L-289"><a href="#L-289"><span class="linenos">289</span></a><span class="sd"> """</span>
</span><span id="L-290"><a href="#L-290"><span class="linenos">290</span></a>
</span><span id="L-291"><a href="#L-291"><span class="linenos">291</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_gen_obsd_from_datad</span><span class="p">(</span><span class="n">d</span><span class="p">):</span>
</span><span id="L-292"><a href="#L-292"><span class="linenos">292</span></a> <span class="n">retd</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-293"><a href="#L-293"><span class="linenos">293</span></a> <span class="k">if</span> <span class="n">d</span><span class="p">:</span>
</span><span id="L-294"><a href="#L-294"><span class="linenos">294</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'names'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-295"><a href="#L-295"><span class="linenos">295</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'idl'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-296"><a href="#L-296"><span class="linenos">296</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-297"><a href="#L-297"><span class="linenos">297</span></a> <span class="k">for</span> <span class="n">ens</span> <span class="ow">in</span> <span class="n">d</span><span class="p">:</span>
</span><span id="L-298"><a href="#L-298"><span class="linenos">298</span></a> <span class="k">for</span> <span class="n">rep</span> <span class="ow">in</span> <span class="n">ens</span><span class="p">[</span><span class="s1">'replica'</span><span class="p">]:</span>
</span><span id="L-299"><a href="#L-299"><span class="linenos">299</span></a> <span class="n">rep_name</span> <span class="o">=</span> <span class="n">rep</span><span class="p">[</span><span class="s1">'name'</span><span class="p">]</span>
</span><span id="L-300"><a href="#L-300"><span class="linenos">300</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">rep_name</span><span class="p">)</span> <span class="o">></span> <span class="nb">len</span><span class="p">(</span><span class="n">ens</span><span class="p">[</span><span class="s2">"id"</span><span class="p">]):</span>
</span><span id="L-301"><a href="#L-301"><span class="linenos">301</span></a> <span class="k">if</span> <span class="n">rep_name</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="n">ens</span><span class="p">[</span><span class="s2">"id"</span><span class="p">])]</span> <span class="o">!=</span> <span class="s2">"|"</span><span class="p">:</span>
</span><span id="L-302"><a href="#L-302"><span class="linenos">302</span></a> <span class="n">tmp_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">rep_name</span><span class="p">)</span>
</span><span id="L-303"><a href="#L-303"><span class="linenos">303</span></a> <span class="n">tmp_list</span> <span class="o">=</span> <span class="n">tmp_list</span><span class="p">[:</span><span class="nb">len</span><span class="p">(</span><span class="n">ens</span><span class="p">[</span><span class="s2">"id"</span><span class="p">])]</span> <span class="o">+</span> <span class="p">[</span><span class="s2">"|"</span><span class="p">]</span> <span class="o">+</span> <span class="n">tmp_list</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="n">ens</span><span class="p">[</span><span class="s2">"id"</span><span class="p">]):]</span>
</span><span id="L-304"><a href="#L-304"><span class="linenos">304</span></a> <span class="n">rep_name</span> <span class="o">=</span> <span class="s1">''</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">tmp_list</span><span class="p">)</span>
</span><span id="L-305"><a href="#L-305"><span class="linenos">305</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'names'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">rep_name</span><span class="p">)</span>
</span><span id="L-306"><a href="#L-306"><span class="linenos">306</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'idl'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">di</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="k">for</span> <span class="n">di</span> <span class="ow">in</span> <span class="n">rep</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]])</span>
</span><span id="L-307"><a href="#L-307"><span class="linenos">307</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="n">di</span><span class="p">[</span><span class="mi">1</span><span class="p">:]</span> <span class="k">for</span> <span class="n">di</span> <span class="ow">in</span> <span class="n">rep</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]]))</span>
</span><span id="L-308"><a href="#L-308"><span class="linenos">308</span></a> <span class="k">return</span> <span class="n">retd</span>
</span><span id="L-309"><a href="#L-309"><span class="linenos">309</span></a>
</span><span id="L-310"><a href="#L-310"><span class="linenos">310</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_gen_covobsd_from_cdatad</span><span class="p">(</span><span class="n">d</span><span class="p">):</span>
</span><span id="L-311"><a href="#L-311"><span class="linenos">311</span></a> <span class="n">retd</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-312"><a href="#L-312"><span class="linenos">312</span></a> <span class="k">for</span> <span class="n">ens</span> <span class="ow">in</span> <span class="n">d</span><span class="p">:</span>
</span><span id="L-313"><a href="#L-313"><span class="linenos">313</span></a> <span class="n">retl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-314"><a href="#L-314"><span class="linenos">314</span></a> <span class="n">name</span> <span class="o">=</span> <span class="n">ens</span><span class="p">[</span><span class="s1">'id'</span><span class="p">]</span>
</span><span id="L-315"><a href="#L-315"><span class="linenos">315</span></a> <span class="n">layouts</span> <span class="o">=</span> <span class="n">ens</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'layout'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">)</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span>
</span><span id="L-316"><a href="#L-316"><span class="linenos">316</span></a> <span class="n">layout</span> <span class="o">=</span> <span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">ls</span><span class="o">.</span><span class="n">strip</span><span class="p">())</span> <span class="k">for</span> <span class="n">ls</span> <span class="ow">in</span> <span class="n">layouts</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">','</span><span class="p">)</span> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">ls</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">]</span>
</span><span id="L-317"><a href="#L-317"><span class="linenos">317</span></a> <span class="n">cov</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ens</span><span class="p">[</span><span class="s1">'cov'</span><span class="p">],</span> <span class="n">layout</span><span class="p">)</span>
</span><span id="L-318"><a href="#L-318"><span class="linenos">318</span></a> <span class="n">grad</span> <span class="o">=</span> <span class="n">ens</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">]</span>
</span><span id="L-319"><a href="#L-319"><span class="linenos">319</span></a> <span class="n">nobs</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">grad</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
</span><span id="L-320"><a href="#L-320"><span class="linenos">320</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">nobs</span><span class="p">):</span>
</span><span id="L-321"><a href="#L-321"><span class="linenos">321</span></a> <span class="n">retl</span><span class="o">.</span><span class="n">append</span><span class="p">({</span><span class="s1">'name'</span><span class="p">:</span> <span class="n">name</span><span class="p">,</span> <span class="s1">'cov'</span><span class="p">:</span> <span class="n">cov</span><span class="p">,</span> <span class="s1">'grad'</span><span class="p">:</span> <span class="p">[</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="k">for</span> <span class="n">g</span> <span class="ow">in</span> <span class="n">grad</span><span class="p">]})</span>
</span><span id="L-322"><a href="#L-322"><span class="linenos">322</span></a> <span class="n">retd</span><span class="p">[</span><span class="n">name</span><span class="p">]</span> <span class="o">=</span> <span class="n">retl</span>
</span><span id="L-323"><a href="#L-323"><span class="linenos">323</span></a> <span class="k">return</span> <span class="n">retd</span>
</span><span id="L-324"><a href="#L-324"><span class="linenos">324</span></a>
</span><span id="L-325"><a href="#L-325"><span class="linenos">325</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">get_Obs_from_dict</span><span class="p">(</span><span class="n">o</span><span class="p">):</span>
</span><span id="L-326"><a href="#L-326"><span class="linenos">326</span></a> <span class="n">layouts</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'layout'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">)</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span>
</span><span id="L-327"><a href="#L-327"><span class="linenos">327</span></a> <span class="k">if</span> <span class="n">layouts</span> <span class="o">!=</span> <span class="s1">'1'</span><span class="p">:</span>
</span><span id="L-328"><a href="#L-328"><span class="linenos">328</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"layout is </span><span class="si">%s</span><span class="s2"> has to be 1 for type Obs."</span> <span class="o">%</span> <span class="p">(</span><span class="n">layouts</span><span class="p">),</span> <span class="ne">RuntimeWarning</span><span class="p">)</span>
</span><span id="L-329"><a href="#L-329"><span class="linenos">329</span></a>
</span><span id="L-330"><a href="#L-330"><span class="linenos">330</span></a> <span class="n">values</span> <span class="o">=</span> <span class="n">o</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span>
</span><span id="L-331"><a href="#L-331"><span class="linenos">331</span></a> <span class="n">od</span> <span class="o">=</span> <span class="n">_gen_obsd_from_datad</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'data'</span><span class="p">,</span> <span class="p">{}))</span>
</span><span id="L-332"><a href="#L-332"><span class="linenos">332</span></a> <span class="n">cd</span> <span class="o">=</span> <span class="n">_gen_covobsd_from_cdatad</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'cdata'</span><span class="p">,</span> <span class="p">{}))</span>
</span><span id="L-333"><a href="#L-333"><span class="linenos">333</span></a>
</span><span id="L-334"><a href="#L-334"><span class="linenos">334</span></a> <span class="k">if</span> <span class="n">od</span><span class="p">:</span>
</span><span id="L-335"><a href="#L-335"><span class="linenos">335</span></a> <span class="n">r_offsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">np</span><span class="o">.</span><span class="n">average</span><span class="p">([</span><span class="n">ddi</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="k">for</span> <span class="n">ddi</span> <span class="ow">in</span> <span class="n">di</span><span class="p">])</span> <span class="k">for</span> <span class="n">di</span> <span class="ow">in</span> <span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]]</span>
</span><span id="L-336"><a href="#L-336"><span class="linenos">336</span></a> <span class="n">ret</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">([</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="n">ddi</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="k">for</span> <span class="n">ddi</span> <span class="ow">in</span> <span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">][</span><span class="n">i</span><span class="p">]])</span> <span class="o">-</span> <span class="n">r_offsets</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]))],</span> <span class="n">od</span><span class="p">[</span><span class="s1">'names'</span><span class="p">],</span> <span class="n">idl</span><span class="o">=</span><span class="n">od</span><span class="p">[</span><span class="s1">'idl'</span><span class="p">],</span> <span class="n">means</span><span class="o">=</span><span class="p">[</span><span class="n">ro</span> <span class="o">+</span> <span class="n">values</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="k">for</span> <span class="n">ro</span> <span class="ow">in</span> <span class="n">r_offsets</span><span class="p">])</span>
</span><span id="L-337"><a href="#L-337"><span class="linenos">337</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">values</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
</span><span id="L-338"><a href="#L-338"><span class="linenos">338</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-339"><a href="#L-339"><span class="linenos">339</span></a> <span class="n">ret</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">([],</span> <span class="p">[],</span> <span class="n">means</span><span class="o">=</span><span class="p">[])</span>
</span><span id="L-340"><a href="#L-340"><span class="linenos">340</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">values</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
</span><span id="L-341"><a href="#L-341"><span class="linenos">341</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">cd</span><span class="p">:</span>
</span><span id="L-342"><a href="#L-342"><span class="linenos">342</span></a> <span class="n">co</span> <span class="o">=</span> <span class="n">cd</span><span class="p">[</span><span class="n">name</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span>
</span><span id="L-343"><a href="#L-343"><span class="linenos">343</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">_covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span> <span class="o">=</span> <span class="n">Covobs</span><span class="p">(</span><span class="kc">None</span><span class="p">,</span> <span class="n">co</span><span class="p">[</span><span class="s1">'cov'</span><span class="p">],</span> <span class="n">co</span><span class="p">[</span><span class="s1">'name'</span><span class="p">],</span> <span class="n">grad</span><span class="o">=</span><span class="n">co</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">])</span>
</span><span id="L-344"><a href="#L-344"><span class="linenos">344</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">co</span><span class="p">[</span><span class="s1">'name'</span><span class="p">])</span>
</span><span id="L-345"><a href="#L-345"><span class="linenos">345</span></a>
</span><span id="L-346"><a href="#L-346"><span class="linenos">346</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">reweighted</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'reweighted'</span><span class="p">,</span> <span class="kc">False</span><span class="p">)</span>
</span><span id="L-347"><a href="#L-347"><span class="linenos">347</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">tag</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">,</span> <span class="p">[</span><span class="kc">None</span><span class="p">])[</span><span class="mi">0</span><span class="p">]</span>
</span><span id="L-348"><a href="#L-348"><span class="linenos">348</span></a> <span class="k">return</span> <span class="n">ret</span>
</span><span id="L-349"><a href="#L-349"><span class="linenos">349</span></a>
</span><span id="L-350"><a href="#L-350"><span class="linenos">350</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">get_List_from_dict</span><span class="p">(</span><span class="n">o</span><span class="p">):</span>
</span><span id="L-351"><a href="#L-351"><span class="linenos">351</span></a> <span class="n">layouts</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'layout'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">)</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span>
</span><span id="L-352"><a href="#L-352"><span class="linenos">352</span></a> <span class="n">layout</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">layouts</span><span class="p">)</span>
</span><span id="L-353"><a href="#L-353"><span class="linenos">353</span></a> <span class="n">values</span> <span class="o">=</span> <span class="n">o</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span>
</span><span id="L-354"><a href="#L-354"><span class="linenos">354</span></a> <span class="n">od</span> <span class="o">=</span> <span class="n">_gen_obsd_from_datad</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'data'</span><span class="p">,</span> <span class="p">{}))</span>
</span><span id="L-355"><a href="#L-355"><span class="linenos">355</span></a> <span class="n">cd</span> <span class="o">=</span> <span class="n">_gen_covobsd_from_cdatad</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'cdata'</span><span class="p">,</span> <span class="p">{}))</span>
</span><span id="L-356"><a href="#L-356"><span class="linenos">356</span></a>
</span><span id="L-357"><a href="#L-357"><span class="linenos">357</span></a> <span class="n">ret</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-358"><a href="#L-358"><span class="linenos">358</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">,</span> <span class="n">layout</span> <span class="o">*</span> <span class="p">[</span><span class="kc">None</span><span class="p">])</span>
</span><span id="L-359"><a href="#L-359"><span class="linenos">359</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">layout</span><span class="p">):</span>
</span><span id="L-360"><a href="#L-360"><span class="linenos">360</span></a> <span class="k">if</span> <span class="n">od</span><span class="p">:</span>
</span><span id="L-361"><a href="#L-361"><span class="linenos">361</span></a> <span class="n">r_offsets</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="n">np</span><span class="o">.</span><span class="n">average</span><span class="p">(</span><span class="n">di</span><span class="p">[:,</span> <span class="n">i</span><span class="p">])</span> <span class="k">for</span> <span class="n">di</span> <span class="ow">in</span> <span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]])</span>
</span><span id="L-362"><a href="#L-362"><span class="linenos">362</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">Obs</span><span class="p">([</span><span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">][</span><span class="n">j</span><span class="p">][:,</span> <span class="n">i</span><span class="p">]</span> <span class="o">-</span> <span class="n">r_offsets</span><span class="p">[</span><span class="n">j</span><span class="p">]</span> <span class="k">for</span> <span class="n">j</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]))],</span> <span class="n">od</span><span class="p">[</span><span class="s1">'names'</span><span class="p">],</span> <span class="n">idl</span><span class="o">=</span><span class="n">od</span><span class="p">[</span><span class="s1">'idl'</span><span class="p">],</span> <span class="n">means</span><span class="o">=</span><span class="p">[</span><span class="n">ro</span> <span class="o">+</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="k">for</span> <span class="n">ro</span> <span class="ow">in</span> <span class="n">r_offsets</span><span class="p">]))</span>
</span><span id="L-363"><a href="#L-363"><span class="linenos">363</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-364"><a href="#L-364"><span class="linenos">364</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-365"><a href="#L-365"><span class="linenos">365</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">Obs</span><span class="p">([],</span> <span class="p">[],</span> <span class="n">means</span><span class="o">=</span><span class="p">[]))</span>
</span><span id="L-366"><a href="#L-366"><span class="linenos">366</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-367"><a href="#L-367"><span class="linenos">367</span></a> <span class="nb">print</span><span class="p">(</span><span class="s1">'Created Obs with means= '</span><span class="p">,</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">])</span>
</span><span id="L-368"><a href="#L-368"><span class="linenos">368</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">cd</span><span class="p">:</span>
</span><span id="L-369"><a href="#L-369"><span class="linenos">369</span></a> <span class="n">co</span> <span class="o">=</span> <span class="n">cd</span><span class="p">[</span><span class="n">name</span><span class="p">][</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-370"><a href="#L-370"><span class="linenos">370</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">_covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span> <span class="o">=</span> <span class="n">Covobs</span><span class="p">(</span><span class="kc">None</span><span class="p">,</span> <span class="n">co</span><span class="p">[</span><span class="s1">'cov'</span><span class="p">],</span> <span class="n">co</span><span class="p">[</span><span class="s1">'name'</span><span class="p">],</span> <span class="n">grad</span><span class="o">=</span><span class="n">co</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">])</span>
</span><span id="L-371"><a href="#L-371"><span class="linenos">371</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">co</span><span class="p">[</span><span class="s1">'name'</span><span class="p">])</span>
</span><span id="L-372"><a href="#L-372"><span class="linenos">372</span></a>
</span><span id="L-373"><a href="#L-373"><span class="linenos">373</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'reweighted'</span><span class="p">,</span> <span class="kc">False</span><span class="p">)</span>
</span><span id="L-374"><a href="#L-374"><span class="linenos">374</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">tag</span> <span class="o">=</span> <span class="n">taglist</span><span class="p">[</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-375"><a href="#L-375"><span class="linenos">375</span></a> <span class="k">return</span> <span class="n">ret</span>
</span><span id="L-376"><a href="#L-376"><span class="linenos">376</span></a>
</span><span id="L-377"><a href="#L-377"><span class="linenos">377</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">get_Array_from_dict</span><span class="p">(</span><span class="n">o</span><span class="p">):</span>
</span><span id="L-378"><a href="#L-378"><span class="linenos">378</span></a> <span class="n">layouts</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'layout'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">)</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span>
</span><span id="L-379"><a href="#L-379"><span class="linenos">379</span></a> <span class="n">layout</span> <span class="o">=</span> <span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">ls</span><span class="o">.</span><span class="n">strip</span><span class="p">())</span> <span class="k">for</span> <span class="n">ls</span> <span class="ow">in</span> <span class="n">layouts</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">','</span><span class="p">)</span> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">ls</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">]</span>
</span><span id="L-380"><a href="#L-380"><span class="linenos">380</span></a> <span class="n">N</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">prod</span><span class="p">(</span><span class="n">layout</span><span class="p">)</span>
</span><span id="L-381"><a href="#L-381"><span class="linenos">381</span></a> <span class="n">values</span> <span class="o">=</span> <span class="n">o</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span>
</span><span id="L-382"><a href="#L-382"><span class="linenos">382</span></a> <span class="n">od</span> <span class="o">=</span> <span class="n">_gen_obsd_from_datad</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'data'</span><span class="p">,</span> <span class="p">{}))</span>
</span><span id="L-383"><a href="#L-383"><span class="linenos">383</span></a> <span class="n">cd</span> <span class="o">=</span> <span class="n">_gen_covobsd_from_cdatad</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'cdata'</span><span class="p">,</span> <span class="p">{}))</span>
</span><span id="L-384"><a href="#L-384"><span class="linenos">384</span></a>
</span><span id="L-385"><a href="#L-385"><span class="linenos">385</span></a> <span class="n">ret</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-386"><a href="#L-386"><span class="linenos">386</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">,</span> <span class="n">N</span> <span class="o">*</span> <span class="p">[</span><span class="kc">None</span><span class="p">])</span>
</span><span id="L-387"><a href="#L-387"><span class="linenos">387</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">N</span><span class="p">):</span>
</span><span id="L-388"><a href="#L-388"><span class="linenos">388</span></a> <span class="k">if</span> <span class="n">od</span><span class="p">:</span>
</span><span id="L-389"><a href="#L-389"><span class="linenos">389</span></a> <span class="n">r_offsets</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="n">np</span><span class="o">.</span><span class="n">average</span><span class="p">(</span><span class="n">di</span><span class="p">[:,</span> <span class="n">i</span><span class="p">])</span> <span class="k">for</span> <span class="n">di</span> <span class="ow">in</span> <span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]])</span>
</span><span id="L-390"><a href="#L-390"><span class="linenos">390</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">Obs</span><span class="p">([</span><span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">][</span><span class="n">j</span><span class="p">][:,</span> <span class="n">i</span><span class="p">]</span> <span class="o">-</span> <span class="n">r_offsets</span><span class="p">[</span><span class="n">j</span><span class="p">]</span> <span class="k">for</span> <span class="n">j</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">od</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]))],</span> <span class="n">od</span><span class="p">[</span><span class="s1">'names'</span><span class="p">],</span> <span class="n">idl</span><span class="o">=</span><span class="n">od</span><span class="p">[</span><span class="s1">'idl'</span><span class="p">],</span> <span class="n">means</span><span class="o">=</span><span class="p">[</span><span class="n">ro</span> <span class="o">+</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="k">for</span> <span class="n">ro</span> <span class="ow">in</span> <span class="n">r_offsets</span><span class="p">]))</span>
</span><span id="L-391"><a href="#L-391"><span class="linenos">391</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-392"><a href="#L-392"><span class="linenos">392</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-393"><a href="#L-393"><span class="linenos">393</span></a> <span class="n">ret</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">Obs</span><span class="p">([],</span> <span class="p">[],</span> <span class="n">means</span><span class="o">=</span><span class="p">[]))</span>
</span><span id="L-394"><a href="#L-394"><span class="linenos">394</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">values</span><span class="p">[</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-395"><a href="#L-395"><span class="linenos">395</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">cd</span><span class="p">:</span>
</span><span id="L-396"><a href="#L-396"><span class="linenos">396</span></a> <span class="n">co</span> <span class="o">=</span> <span class="n">cd</span><span class="p">[</span><span class="n">name</span><span class="p">][</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-397"><a href="#L-397"><span class="linenos">397</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">_covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span> <span class="o">=</span> <span class="n">Covobs</span><span class="p">(</span><span class="kc">None</span><span class="p">,</span> <span class="n">co</span><span class="p">[</span><span class="s1">'cov'</span><span class="p">],</span> <span class="n">co</span><span class="p">[</span><span class="s1">'name'</span><span class="p">],</span> <span class="n">grad</span><span class="o">=</span><span class="n">co</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">])</span>
</span><span id="L-398"><a href="#L-398"><span class="linenos">398</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">co</span><span class="p">[</span><span class="s1">'name'</span><span class="p">])</span>
</span><span id="L-399"><a href="#L-399"><span class="linenos">399</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'reweighted'</span><span class="p">,</span> <span class="kc">False</span><span class="p">)</span>
</span><span id="L-400"><a href="#L-400"><span class="linenos">400</span></a> <span class="n">ret</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">tag</span> <span class="o">=</span> <span class="n">taglist</span><span class="p">[</span><span class="n">i</span><span class="p">]</span>
</span><span id="L-401"><a href="#L-401"><span class="linenos">401</span></a> <span class="k">return</span> <span class="n">np</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ret</span><span class="p">,</span> <span class="n">layout</span><span class="p">)</span>
</span><span id="L-402"><a href="#L-402"><span class="linenos">402</span></a>
</span><span id="L-403"><a href="#L-403"><span class="linenos">403</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">get_Corr_from_dict</span><span class="p">(</span><span class="n">o</span><span class="p">):</span>
</span><span id="L-404"><a href="#L-404"><span class="linenos">404</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">),</span> <span class="nb">list</span><span class="p">):</span> <span class="c1"># supports the old way</span>
</span><span id="L-405"><a href="#L-405"><span class="linenos">405</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">)</span> <span class="c1"># This had to be modified to get the taglist from the dictionary</span>
</span><span id="L-406"><a href="#L-406"><span class="linenos">406</span></a> <span class="n">temp_prange</span> <span class="o">=</span> <span class="kc">None</span>
</span><span id="L-407"><a href="#L-407"><span class="linenos">407</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">),</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-408"><a href="#L-408"><span class="linenos">408</span></a> <span class="n">tagdic</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'tag'</span><span class="p">)</span>
</span><span id="L-409"><a href="#L-409"><span class="linenos">409</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="n">tagdic</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span>
</span><span id="L-410"><a href="#L-410"><span class="linenos">410</span></a> <span class="k">if</span> <span class="s1">'prange'</span> <span class="ow">in</span> <span class="n">tagdic</span><span class="p">:</span>
</span><span id="L-411"><a href="#L-411"><span class="linenos">411</span></a> <span class="n">temp_prange</span> <span class="o">=</span> <span class="n">tagdic</span><span class="p">[</span><span class="s1">'prange'</span><span class="p">]</span>
</span><span id="L-412"><a href="#L-412"><span class="linenos">412</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-413"><a href="#L-413"><span class="linenos">413</span></a> <span class="n">temp_prange</span> <span class="o">=</span> <span class="kc">None</span>
</span><span id="L-414"><a href="#L-414"><span class="linenos">414</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-415"><a href="#L-415"><span class="linenos">415</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"The tag is not a list or dict"</span><span class="p">)</span>
</span><span id="L-416"><a href="#L-416"><span class="linenos">416</span></a>
</span><span id="L-417"><a href="#L-417"><span class="linenos">417</span></a> <span class="n">corr_tag</span> <span class="o">=</span> <span class="n">taglist</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
</span><span id="L-418"><a href="#L-418"><span class="linenos">418</span></a> <span class="n">tmp_o</span> <span class="o">=</span> <span class="n">o</span>
</span><span id="L-419"><a href="#L-419"><span class="linenos">419</span></a> <span class="n">tmp_o</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span><span class="p">[:</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
</span><span id="L-420"><a href="#L-420"><span class="linenos">420</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">tmp_o</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">])</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-421"><a href="#L-421"><span class="linenos">421</span></a> <span class="k">del</span> <span class="n">tmp_o</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span>
</span><span id="L-422"><a href="#L-422"><span class="linenos">422</span></a> <span class="n">dat</span> <span class="o">=</span> <span class="n">get_Array_from_dict</span><span class="p">(</span><span class="n">tmp_o</span><span class="p">)</span>
</span><span id="L-423"><a href="#L-423"><span class="linenos">423</span></a> <span class="n">my_corr</span> <span class="o">=</span> <span class="n">Corr</span><span class="p">([</span><span class="kc">None</span> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">isnan</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">ravel</span><span class="p">()[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="k">else</span> <span class="n">o</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="nb">list</span><span class="p">(</span><span class="n">dat</span><span class="p">)])</span>
</span><span id="L-424"><a href="#L-424"><span class="linenos">424</span></a> <span class="k">if</span> <span class="n">corr_tag</span> <span class="o">!=</span> <span class="s1">'None'</span><span class="p">:</span>
</span><span id="L-425"><a href="#L-425"><span class="linenos">425</span></a> <span class="n">my_corr</span><span class="o">.</span><span class="n">tag</span> <span class="o">=</span> <span class="n">corr_tag</span>
</span><span id="L-426"><a href="#L-426"><span class="linenos">426</span></a>
</span><span id="L-427"><a href="#L-427"><span class="linenos">427</span></a> <span class="n">my_corr</span><span class="o">.</span><span class="n">prange</span> <span class="o">=</span> <span class="n">temp_prange</span>
</span><span id="L-428"><a href="#L-428"><span class="linenos">428</span></a> <span class="k">return</span> <span class="n">my_corr</span>
</span><span id="L-429"><a href="#L-429"><span class="linenos">429</span></a>
</span><span id="L-430"><a href="#L-430"><span class="linenos">430</span></a> <span class="n">prog</span> <span class="o">=</span> <span class="n">json_dict</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'program'</span><span class="p">,</span> <span class="s1">''</span><span class="p">)</span>
</span><span id="L-431"><a href="#L-431"><span class="linenos">431</span></a> <span class="n">version</span> <span class="o">=</span> <span class="n">json_dict</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'version'</span><span class="p">,</span> <span class="s1">''</span><span class="p">)</span>
</span><span id="L-432"><a href="#L-432"><span class="linenos">432</span></a> <span class="n">who</span> <span class="o">=</span> <span class="n">json_dict</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'who'</span><span class="p">,</span> <span class="s1">''</span><span class="p">)</span>
</span><span id="L-433"><a href="#L-433"><span class="linenos">433</span></a> <span class="n">date</span> <span class="o">=</span> <span class="n">json_dict</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'date'</span><span class="p">,</span> <span class="s1">''</span><span class="p">)</span>
</span><span id="L-434"><a href="#L-434"><span class="linenos">434</span></a> <span class="n">host</span> <span class="o">=</span> <span class="n">json_dict</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'host'</span><span class="p">,</span> <span class="s1">''</span><span class="p">)</span>
</span><span id="L-435"><a href="#L-435"><span class="linenos">435</span></a> <span class="k">if</span> <span class="n">prog</span> <span class="ow">and</span> <span class="n">verbose</span><span class="p">:</span>
</span><span id="L-436"><a href="#L-436"><span class="linenos">436</span></a> <span class="nb">print</span><span class="p">(</span><span class="s1">'Data has been written using </span><span class="si">%s</span><span class="s1">.'</span> <span class="o">%</span> <span class="p">(</span><span class="n">prog</span><span class="p">))</span>
</span><span id="L-437"><a href="#L-437"><span class="linenos">437</span></a> <span class="k">if</span> <span class="n">version</span> <span class="ow">and</span> <span class="n">verbose</span><span class="p">:</span>
</span><span id="L-438"><a href="#L-438"><span class="linenos">438</span></a> <span class="nb">print</span><span class="p">(</span><span class="s1">'Format version </span><span class="si">%s</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">version</span><span class="p">))</span>
</span><span id="L-439"><a href="#L-439"><span class="linenos">439</span></a> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">any</span><span class="p">([</span><span class="n">who</span><span class="p">,</span> <span class="n">date</span><span class="p">,</span> <span class="n">host</span><span class="p">]</span> <span class="ow">and</span> <span class="n">verbose</span><span class="p">):</span>
</span><span id="L-440"><a href="#L-440"><span class="linenos">440</span></a> <span class="nb">print</span><span class="p">(</span><span class="s1">'Written by </span><span class="si">%s</span><span class="s1"> on </span><span class="si">%s</span><span class="s1"> on host </span><span class="si">%s</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">who</span><span class="p">,</span> <span class="n">date</span><span class="p">,</span> <span class="n">host</span><span class="p">))</span>
</span><span id="L-441"><a href="#L-441"><span class="linenos">441</span></a> <span class="n">description</span> <span class="o">=</span> <span class="n">json_dict</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'description'</span><span class="p">,</span> <span class="s1">''</span><span class="p">)</span>
</span><span id="L-442"><a href="#L-442"><span class="linenos">442</span></a> <span class="k">if</span> <span class="n">description</span> <span class="ow">and</span> <span class="n">verbose</span><span class="p">:</span>
</span><span id="L-443"><a href="#L-443"><span class="linenos">443</span></a> <span class="nb">print</span><span class="p">()</span>
</span><span id="L-444"><a href="#L-444"><span class="linenos">444</span></a> <span class="nb">print</span><span class="p">(</span><span class="s1">'Description: '</span><span class="p">,</span> <span class="n">description</span><span class="p">)</span>
</span><span id="L-445"><a href="#L-445"><span class="linenos">445</span></a> <span class="n">obsdata</span> <span class="o">=</span> <span class="n">json_dict</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span>
</span><span id="L-446"><a href="#L-446"><span class="linenos">446</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-447"><a href="#L-447"><span class="linenos">447</span></a> <span class="k">for</span> <span class="n">io</span> <span class="ow">in</span> <span class="n">obsdata</span><span class="p">:</span>
</span><span id="L-448"><a href="#L-448"><span class="linenos">448</span></a> <span class="k">if</span> <span class="n">io</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">==</span> <span class="s1">'Obs'</span><span class="p">:</span>
</span><span id="L-449"><a href="#L-449"><span class="linenos">449</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">get_Obs_from_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-450"><a href="#L-450"><span class="linenos">450</span></a> <span class="k">elif</span> <span class="n">io</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">==</span> <span class="s1">'List'</span><span class="p">:</span>
</span><span id="L-451"><a href="#L-451"><span class="linenos">451</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">get_List_from_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-452"><a href="#L-452"><span class="linenos">452</span></a> <span class="k">elif</span> <span class="n">io</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">==</span> <span class="s1">'Array'</span><span class="p">:</span>
</span><span id="L-453"><a href="#L-453"><span class="linenos">453</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">get_Array_from_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-454"><a href="#L-454"><span class="linenos">454</span></a> <span class="k">elif</span> <span class="n">io</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">==</span> <span class="s1">'Corr'</span><span class="p">:</span>
</span><span id="L-455"><a href="#L-455"><span class="linenos">455</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">get_Corr_from_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="L-456"><a href="#L-456"><span class="linenos">456</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-457"><a href="#L-457"><span class="linenos">457</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Unknown datatype."</span><span class="p">)</span>
</span><span id="L-458"><a href="#L-458"><span class="linenos">458</span></a>
</span><span id="L-459"><a href="#L-459"><span class="linenos">459</span></a> <span class="k">if</span> <span class="n">full_output</span><span class="p">:</span>
</span><span id="L-460"><a href="#L-460"><span class="linenos">460</span></a> <span class="n">retd</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-461"><a href="#L-461"><span class="linenos">461</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'program'</span><span class="p">]</span> <span class="o">=</span> <span class="n">prog</span>
</span><span id="L-462"><a href="#L-462"><span class="linenos">462</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'version'</span><span class="p">]</span> <span class="o">=</span> <span class="n">version</span>
</span><span id="L-463"><a href="#L-463"><span class="linenos">463</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'who'</span><span class="p">]</span> <span class="o">=</span> <span class="n">who</span>
</span><span id="L-464"><a href="#L-464"><span class="linenos">464</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="n">date</span>
</span><span id="L-465"><a href="#L-465"><span class="linenos">465</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'host'</span><span class="p">]</span> <span class="o">=</span> <span class="n">host</span>
</span><span id="L-466"><a href="#L-466"><span class="linenos">466</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'description'</span><span class="p">]</span> <span class="o">=</span> <span class="n">description</span>
</span><span id="L-467"><a href="#L-467"><span class="linenos">467</span></a> <span class="n">retd</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ol</span>
</span><span id="L-468"><a href="#L-468"><span class="linenos">468</span></a>
</span><span id="L-469"><a href="#L-469"><span class="linenos">469</span></a> <span class="k">return</span> <span class="n">retd</span>
</span><span id="L-470"><a href="#L-470"><span class="linenos">470</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-471"><a href="#L-471"><span class="linenos">471</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">obsdata</span><span class="p">)</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
</span><span id="L-472"><a href="#L-472"><span class="linenos">472</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
</span><span id="L-473"><a href="#L-473"><span class="linenos">473</span></a>
</span><span id="L-474"><a href="#L-474"><span class="linenos">474</span></a> <span class="k">return</span> <span class="n">ol</span>
</span><span id="L-475"><a href="#L-475"><span class="linenos">475</span></a>
</span><span id="L-476"><a href="#L-476"><span class="linenos">476</span></a>
</span><span id="L-477"><a href="#L-477"><span class="linenos">477</span></a><span class="k">def</span><span class="w"> </span><span class="nf">import_json_string</span><span class="p">(</span><span class="n">json_string</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
</span><span id="L-478"><a href="#L-478"><span class="linenos">478</span></a><span class="w"> </span><span class="sd">"""Reconstruct a list of Obs or structures containing Obs from a json string.</span>
</span><span id="L-479"><a href="#L-479"><span class="linenos">479</span></a>
</span><span id="L-480"><a href="#L-480"><span class="linenos">480</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="L-481"><a href="#L-481"><span class="linenos">481</span></a><span class="sd"> If the list contains only one element, it is unpacked from the list.</span>
</span><span id="L-482"><a href="#L-482"><span class="linenos">482</span></a>
</span><span id="L-483"><a href="#L-483"><span class="linenos">483</span></a><span class="sd"> Parameters</span>
</span><span id="L-484"><a href="#L-484"><span class="linenos">484</span></a><span class="sd"> ----------</span>
</span><span id="L-485"><a href="#L-485"><span class="linenos">485</span></a><span class="sd"> json_string : str</span>
</span><span id="L-486"><a href="#L-486"><span class="linenos">486</span></a><span class="sd"> json string containing the data.</span>
</span><span id="L-487"><a href="#L-487"><span class="linenos">487</span></a><span class="sd"> verbose : bool</span>
</span><span id="L-488"><a href="#L-488"><span class="linenos">488</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="L-489"><a href="#L-489"><span class="linenos">489</span></a><span class="sd"> full_output : bool</span>
</span><span id="L-490"><a href="#L-490"><span class="linenos">490</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="L-491"><a href="#L-491"><span class="linenos">491</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="L-492"><a href="#L-492"><span class="linenos">492</span></a>
</span><span id="L-493"><a href="#L-493"><span class="linenos">493</span></a><span class="sd"> Returns</span>
</span><span id="L-494"><a href="#L-494"><span class="linenos">494</span></a><span class="sd"> -------</span>
</span><span id="L-495"><a href="#L-495"><span class="linenos">495</span></a><span class="sd"> result : list[Obs]</span>
</span><span id="L-496"><a href="#L-496"><span class="linenos">496</span></a><span class="sd"> reconstructed list of observables from the json string</span>
</span><span id="L-497"><a href="#L-497"><span class="linenos">497</span></a><span class="sd"> or</span>
</span><span id="L-498"><a href="#L-498"><span class="linenos">498</span></a><span class="sd"> result : Obs</span>
</span><span id="L-499"><a href="#L-499"><span class="linenos">499</span></a><span class="sd"> only one observable if the list only has one entry</span>
</span><span id="L-500"><a href="#L-500"><span class="linenos">500</span></a><span class="sd"> or</span>
</span><span id="L-501"><a href="#L-501"><span class="linenos">501</span></a><span class="sd"> result : dict</span>
</span><span id="L-502"><a href="#L-502"><span class="linenos">502</span></a><span class="sd"> if full_output=True</span>
</span><span id="L-503"><a href="#L-503"><span class="linenos">503</span></a><span class="sd"> """</span>
</span><span id="L-504"><a href="#L-504"><span class="linenos">504</span></a> <span class="k">return</span> <span class="n">_parse_json_dict</span><span class="p">(</span><span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">json_string</span><span class="p">),</span> <span class="n">verbose</span><span class="p">,</span> <span class="n">full_output</span><span class="p">)</span>
</span><span id="L-505"><a href="#L-505"><span class="linenos">505</span></a>
</span><span id="L-506"><a href="#L-506"><span class="linenos">506</span></a>
</span><span id="L-507"><a href="#L-507"><span class="linenos">507</span></a><span class="k">def</span><span class="w"> </span><span class="nf">load_json</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
</span><span id="L-508"><a href="#L-508"><span class="linenos">508</span></a><span class="w"> </span><span class="sd">"""Import a list of Obs or structures containing Obs from a .json(.gz) file.</span>
</span><span id="L-509"><a href="#L-509"><span class="linenos">509</span></a>
</span><span id="L-510"><a href="#L-510"><span class="linenos">510</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="L-511"><a href="#L-511"><span class="linenos">511</span></a><span class="sd"> If the list contains only one element, it is unpacked from the list.</span>
</span><span id="L-512"><a href="#L-512"><span class="linenos">512</span></a>
</span><span id="L-513"><a href="#L-513"><span class="linenos">513</span></a><span class="sd"> Parameters</span>
</span><span id="L-514"><a href="#L-514"><span class="linenos">514</span></a><span class="sd"> ----------</span>
</span><span id="L-515"><a href="#L-515"><span class="linenos">515</span></a><span class="sd"> fname : str</span>
</span><span id="L-516"><a href="#L-516"><span class="linenos">516</span></a><span class="sd"> Filename of the input file.</span>
</span><span id="L-517"><a href="#L-517"><span class="linenos">517</span></a><span class="sd"> verbose : bool</span>
</span><span id="L-518"><a href="#L-518"><span class="linenos">518</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="L-519"><a href="#L-519"><span class="linenos">519</span></a><span class="sd"> gz : bool</span>
</span><span id="L-520"><a href="#L-520"><span class="linenos">520</span></a><span class="sd"> If True, assumes that data is gzipped. If False, assumes JSON file.</span>
</span><span id="L-521"><a href="#L-521"><span class="linenos">521</span></a><span class="sd"> full_output : bool</span>
</span><span id="L-522"><a href="#L-522"><span class="linenos">522</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="L-523"><a href="#L-523"><span class="linenos">523</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="L-524"><a href="#L-524"><span class="linenos">524</span></a>
</span><span id="L-525"><a href="#L-525"><span class="linenos">525</span></a><span class="sd"> Returns</span>
</span><span id="L-526"><a href="#L-526"><span class="linenos">526</span></a><span class="sd"> -------</span>
</span><span id="L-527"><a href="#L-527"><span class="linenos">527</span></a><span class="sd"> result : list[Obs]</span>
</span><span id="L-528"><a href="#L-528"><span class="linenos">528</span></a><span class="sd"> reconstructed list of observables from the json string</span>
</span><span id="L-529"><a href="#L-529"><span class="linenos">529</span></a><span class="sd"> or</span>
</span><span id="L-530"><a href="#L-530"><span class="linenos">530</span></a><span class="sd"> result : Obs</span>
</span><span id="L-531"><a href="#L-531"><span class="linenos">531</span></a><span class="sd"> only one observable if the list only has one entry</span>
</span><span id="L-532"><a href="#L-532"><span class="linenos">532</span></a><span class="sd"> or</span>
</span><span id="L-533"><a href="#L-533"><span class="linenos">533</span></a><span class="sd"> result : dict</span>
</span><span id="L-534"><a href="#L-534"><span class="linenos">534</span></a><span class="sd"> if full_output=True</span>
</span><span id="L-535"><a href="#L-535"><span class="linenos">535</span></a><span class="sd"> """</span>
</span><span id="L-536"><a href="#L-536"><span class="linenos">536</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.json'</span><span class="p">)</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="L-537"><a href="#L-537"><span class="linenos">537</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.json'</span>
</span><span id="L-538"><a href="#L-538"><span class="linenos">538</span></a> <span class="k">if</span> <span class="n">gz</span><span class="p">:</span>
</span><span id="L-539"><a href="#L-539"><span class="linenos">539</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="L-540"><a href="#L-540"><span class="linenos">540</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.gz'</span>
</span><span id="L-541"><a href="#L-541"><span class="linenos">541</span></a> <span class="k">with</span> <span class="n">gzip</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">)</span> <span class="k">as</span> <span class="n">fin</span><span class="p">:</span>
</span><span id="L-542"><a href="#L-542"><span class="linenos">542</span></a> <span class="n">d</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">fin</span><span class="p">)</span>
</span><span id="L-543"><a href="#L-543"><span class="linenos">543</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-544"><a href="#L-544"><span class="linenos">544</span></a> <span class="k">if</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="L-545"><a href="#L-545"><span class="linenos">545</span></a> <span class="n">warnings</span><span class="o">.</span><span class="n">warn</span><span class="p">(</span><span class="s2">"Trying to read from </span><span class="si">%s</span><span class="s2"> without unzipping!"</span> <span class="o">%</span> <span class="n">fname</span><span class="p">,</span> <span class="ne">UserWarning</span><span class="p">)</span>
</span><span id="L-546"><a href="#L-546"><span class="linenos">546</span></a> <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s1">'utf-8'</span><span class="p">)</span> <span class="k">as</span> <span class="n">fin</span><span class="p">:</span>
</span><span id="L-547"><a href="#L-547"><span class="linenos">547</span></a> <span class="n">d</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">fin</span><span class="o">.</span><span class="n">read</span><span class="p">())</span>
</span><span id="L-548"><a href="#L-548"><span class="linenos">548</span></a>
</span><span id="L-549"><a href="#L-549"><span class="linenos">549</span></a> <span class="k">return</span> <span class="n">_parse_json_dict</span><span class="p">(</span><span class="n">d</span><span class="p">,</span> <span class="n">verbose</span><span class="p">,</span> <span class="n">full_output</span><span class="p">)</span>
</span><span id="L-550"><a href="#L-550"><span class="linenos">550</span></a>
</span><span id="L-551"><a href="#L-551"><span class="linenos">551</span></a>
</span><span id="L-552"><a href="#L-552"><span class="linenos">552</span></a><span class="k">def</span><span class="w"> </span><span class="nf">_ol_from_dict</span><span class="p">(</span><span class="n">ind</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span><span class="p">):</span>
</span><span id="L-553"><a href="#L-553"><span class="linenos">553</span></a><span class="w"> </span><span class="sd">"""Convert a dictionary of Obs objects to a list and a dictionary that contains</span>
</span><span id="L-554"><a href="#L-554"><span class="linenos">554</span></a><span class="sd"> placeholders instead of the Obs objects.</span>
</span><span id="L-555"><a href="#L-555"><span class="linenos">555</span></a>
</span><span id="L-556"><a href="#L-556"><span class="linenos">556</span></a><span class="sd"> Parameters</span>
</span><span id="L-557"><a href="#L-557"><span class="linenos">557</span></a><span class="sd"> ----------</span>
</span><span id="L-558"><a href="#L-558"><span class="linenos">558</span></a><span class="sd"> ind : dict</span>
</span><span id="L-559"><a href="#L-559"><span class="linenos">559</span></a><span class="sd"> Dict of JSON valid structures and objects that will be exported.</span>
</span><span id="L-560"><a href="#L-560"><span class="linenos">560</span></a><span class="sd"> At the moment, these object can be either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="L-561"><a href="#L-561"><span class="linenos">561</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="L-562"><a href="#L-562"><span class="linenos">562</span></a><span class="sd"> reps : str</span>
</span><span id="L-563"><a href="#L-563"><span class="linenos">563</span></a><span class="sd"> Specify the structure of the placeholder in exported dict to be reps[0-9]+.</span>
</span><span id="L-564"><a href="#L-564"><span class="linenos">564</span></a><span class="sd"> """</span>
</span><span id="L-565"><a href="#L-565"><span class="linenos">565</span></a>
</span><span id="L-566"><a href="#L-566"><span class="linenos">566</span></a> <span class="n">obstypes</span> <span class="o">=</span> <span class="p">(</span><span class="n">Obs</span><span class="p">,</span> <span class="n">Corr</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
</span><span id="L-567"><a href="#L-567"><span class="linenos">567</span></a>
</span><span id="L-568"><a href="#L-568"><span class="linenos">568</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">reps</span><span class="o">.</span><span class="n">isalnum</span><span class="p">():</span>
</span><span id="L-569"><a href="#L-569"><span class="linenos">569</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Placeholder string has to be alphanumeric!'</span><span class="p">)</span>
</span><span id="L-570"><a href="#L-570"><span class="linenos">570</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-571"><a href="#L-571"><span class="linenos">571</span></a> <span class="n">counter</span> <span class="o">=</span> <span class="mi">0</span>
</span><span id="L-572"><a href="#L-572"><span class="linenos">572</span></a>
</span><span id="L-573"><a href="#L-573"><span class="linenos">573</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">dict_replace_obs</span><span class="p">(</span><span class="n">d</span><span class="p">):</span>
</span><span id="L-574"><a href="#L-574"><span class="linenos">574</span></a> <span class="k">nonlocal</span> <span class="n">ol</span>
</span><span id="L-575"><a href="#L-575"><span class="linenos">575</span></a> <span class="k">nonlocal</span> <span class="n">counter</span>
</span><span id="L-576"><a href="#L-576"><span class="linenos">576</span></a> <span class="n">x</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-577"><a href="#L-577"><span class="linenos">577</span></a> <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">d</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
</span><span id="L-578"><a href="#L-578"><span class="linenos">578</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-579"><a href="#L-579"><span class="linenos">579</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">dict_replace_obs</span><span class="p">(</span><span class="n">v</span><span class="p">)</span>
</span><span id="L-580"><a href="#L-580"><span class="linenos">580</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">list</span><span class="p">)</span> <span class="ow">and</span> <span class="nb">all</span><span class="p">([</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">o</span><span class="p">,</span> <span class="n">Obs</span><span class="p">)</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">v</span><span class="p">]):</span>
</span><span id="L-581"><a href="#L-581"><span class="linenos">581</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">obslist_replace_obs</span><span class="p">(</span><span class="n">v</span><span class="p">)</span>
</span><span id="L-582"><a href="#L-582"><span class="linenos">582</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="L-583"><a href="#L-583"><span class="linenos">583</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">list_replace_obs</span><span class="p">(</span><span class="n">v</span><span class="p">)</span>
</span><span id="L-584"><a href="#L-584"><span class="linenos">584</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="n">obstypes</span><span class="p">):</span>
</span><span id="L-585"><a href="#L-585"><span class="linenos">585</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">v</span><span class="p">)</span>
</span><span id="L-586"><a href="#L-586"><span class="linenos">586</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">reps</span> <span class="o">+</span> <span class="s1">'</span><span class="si">%d</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">counter</span><span class="p">)</span>
</span><span id="L-587"><a href="#L-587"><span class="linenos">587</span></a> <span class="n">counter</span> <span class="o">+=</span> <span class="mi">1</span>
</span><span id="L-588"><a href="#L-588"><span class="linenos">588</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
</span><span id="L-589"><a href="#L-589"><span class="linenos">589</span></a> <span class="k">if</span> <span class="nb">bool</span><span class="p">(</span><span class="n">re</span><span class="o">.</span><span class="n">match</span><span class="p">(</span><span class="sa">r</span><span class="s1">'</span><span class="si">%s</span><span class="s1">[0-9]+'</span> <span class="o">%</span> <span class="p">(</span><span class="n">reps</span><span class="p">),</span> <span class="n">v</span><span class="p">)):</span>
</span><span id="L-590"><a href="#L-590"><span class="linenos">590</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Dict contains string </span><span class="si">%s</span><span class="s1"> that matches the placeholder! </span><span class="si">%s</span><span class="s1"> Cannot be safely exported.'</span> <span class="o">%</span> <span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="n">reps</span><span class="p">))</span>
</span><span id="L-591"><a href="#L-591"><span class="linenos">591</span></a> <span class="n">x</span><span class="p">[</span><span class="n">k</span><span class="p">]</span> <span class="o">=</span> <span class="n">v</span>
</span><span id="L-592"><a href="#L-592"><span class="linenos">592</span></a> <span class="k">return</span> <span class="n">x</span>
</span><span id="L-593"><a href="#L-593"><span class="linenos">593</span></a>
</span><span id="L-594"><a href="#L-594"><span class="linenos">594</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">list_replace_obs</span><span class="p">(</span><span class="n">li</span><span class="p">):</span>
</span><span id="L-595"><a href="#L-595"><span class="linenos">595</span></a> <span class="k">nonlocal</span> <span class="n">ol</span>
</span><span id="L-596"><a href="#L-596"><span class="linenos">596</span></a> <span class="k">nonlocal</span> <span class="n">counter</span>
</span><span id="L-597"><a href="#L-597"><span class="linenos">597</span></a> <span class="n">x</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-598"><a href="#L-598"><span class="linenos">598</span></a> <span class="k">for</span> <span class="n">e</span> <span class="ow">in</span> <span class="n">li</span><span class="p">:</span>
</span><span id="L-599"><a href="#L-599"><span class="linenos">599</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="L-600"><a href="#L-600"><span class="linenos">600</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">list_replace_obs</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-601"><a href="#L-601"><span class="linenos">601</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">list</span><span class="p">)</span> <span class="ow">and</span> <span class="nb">all</span><span class="p">([</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">o</span><span class="p">,</span> <span class="n">Obs</span><span class="p">)</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">e</span><span class="p">]):</span>
</span><span id="L-602"><a href="#L-602"><span class="linenos">602</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">obslist_replace_obs</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-603"><a href="#L-603"><span class="linenos">603</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-604"><a href="#L-604"><span class="linenos">604</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">dict_replace_obs</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-605"><a href="#L-605"><span class="linenos">605</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="n">obstypes</span><span class="p">):</span>
</span><span id="L-606"><a href="#L-606"><span class="linenos">606</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-607"><a href="#L-607"><span class="linenos">607</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">reps</span> <span class="o">+</span> <span class="s1">'</span><span class="si">%d</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">counter</span><span class="p">)</span>
</span><span id="L-608"><a href="#L-608"><span class="linenos">608</span></a> <span class="n">counter</span> <span class="o">+=</span> <span class="mi">1</span>
</span><span id="L-609"><a href="#L-609"><span class="linenos">609</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
</span><span id="L-610"><a href="#L-610"><span class="linenos">610</span></a> <span class="k">if</span> <span class="nb">bool</span><span class="p">(</span><span class="n">re</span><span class="o">.</span><span class="n">match</span><span class="p">(</span><span class="sa">r</span><span class="s1">'</span><span class="si">%s</span><span class="s1">[0-9]+'</span> <span class="o">%</span> <span class="p">(</span><span class="n">reps</span><span class="p">),</span> <span class="n">e</span><span class="p">)):</span>
</span><span id="L-611"><a href="#L-611"><span class="linenos">611</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Dict contains string </span><span class="si">%s</span><span class="s1"> that matches the placeholder! </span><span class="si">%s</span><span class="s1"> Cannot be safely exported.'</span> <span class="o">%</span> <span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="n">reps</span><span class="p">))</span>
</span><span id="L-612"><a href="#L-612"><span class="linenos">612</span></a> <span class="n">x</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-613"><a href="#L-613"><span class="linenos">613</span></a> <span class="k">return</span> <span class="n">x</span>
</span><span id="L-614"><a href="#L-614"><span class="linenos">614</span></a>
</span><span id="L-615"><a href="#L-615"><span class="linenos">615</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">obslist_replace_obs</span><span class="p">(</span><span class="n">li</span><span class="p">):</span>
</span><span id="L-616"><a href="#L-616"><span class="linenos">616</span></a> <span class="k">nonlocal</span> <span class="n">ol</span>
</span><span id="L-617"><a href="#L-617"><span class="linenos">617</span></a> <span class="k">nonlocal</span> <span class="n">counter</span>
</span><span id="L-618"><a href="#L-618"><span class="linenos">618</span></a> <span class="n">il</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-619"><a href="#L-619"><span class="linenos">619</span></a> <span class="k">for</span> <span class="n">e</span> <span class="ow">in</span> <span class="n">li</span><span class="p">:</span>
</span><span id="L-620"><a href="#L-620"><span class="linenos">620</span></a> <span class="n">il</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-621"><a href="#L-621"><span class="linenos">621</span></a>
</span><span id="L-622"><a href="#L-622"><span class="linenos">622</span></a> <span class="n">ol</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">il</span><span class="p">)</span>
</span><span id="L-623"><a href="#L-623"><span class="linenos">623</span></a> <span class="n">x</span> <span class="o">=</span> <span class="n">reps</span> <span class="o">+</span> <span class="s1">'</span><span class="si">%d</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">counter</span><span class="p">)</span>
</span><span id="L-624"><a href="#L-624"><span class="linenos">624</span></a> <span class="n">counter</span> <span class="o">+=</span> <span class="mi">1</span>
</span><span id="L-625"><a href="#L-625"><span class="linenos">625</span></a> <span class="k">return</span> <span class="n">x</span>
</span><span id="L-626"><a href="#L-626"><span class="linenos">626</span></a>
</span><span id="L-627"><a href="#L-627"><span class="linenos">627</span></a> <span class="n">nd</span> <span class="o">=</span> <span class="n">dict_replace_obs</span><span class="p">(</span><span class="n">ind</span><span class="p">)</span>
</span><span id="L-628"><a href="#L-628"><span class="linenos">628</span></a>
</span><span id="L-629"><a href="#L-629"><span class="linenos">629</span></a> <span class="k">return</span> <span class="n">ol</span><span class="p">,</span> <span class="n">nd</span>
</span><span id="L-630"><a href="#L-630"><span class="linenos">630</span></a>
</span><span id="L-631"><a href="#L-631"><span class="linenos">631</span></a>
</span><span id="L-632"><a href="#L-632"><span class="linenos">632</span></a><span class="k">def</span><span class="w"> </span><span class="nf">dump_dict_to_json</span><span class="p">(</span><span class="n">od</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="s1">''</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
</span><span id="L-633"><a href="#L-633"><span class="linenos">633</span></a><span class="w"> </span><span class="sd">"""Export a dict of Obs or structures containing Obs to a .json(.gz) file</span>
</span><span id="L-634"><a href="#L-634"><span class="linenos">634</span></a>
</span><span id="L-635"><a href="#L-635"><span class="linenos">635</span></a><span class="sd"> Parameters</span>
</span><span id="L-636"><a href="#L-636"><span class="linenos">636</span></a><span class="sd"> ----------</span>
</span><span id="L-637"><a href="#L-637"><span class="linenos">637</span></a><span class="sd"> od : dict</span>
</span><span id="L-638"><a href="#L-638"><span class="linenos">638</span></a><span class="sd"> Dict of JSON valid structures and objects that will be exported.</span>
</span><span id="L-639"><a href="#L-639"><span class="linenos">639</span></a><span class="sd"> At the moment, these objects can be either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="L-640"><a href="#L-640"><span class="linenos">640</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="L-641"><a href="#L-641"><span class="linenos">641</span></a><span class="sd"> fname : str</span>
</span><span id="L-642"><a href="#L-642"><span class="linenos">642</span></a><span class="sd"> Filename of the output file.</span>
</span><span id="L-643"><a href="#L-643"><span class="linenos">643</span></a><span class="sd"> description : str</span>
</span><span id="L-644"><a href="#L-644"><span class="linenos">644</span></a><span class="sd"> Optional string that describes the contents of the json file.</span>
</span><span id="L-645"><a href="#L-645"><span class="linenos">645</span></a><span class="sd"> indent : int</span>
</span><span id="L-646"><a href="#L-646"><span class="linenos">646</span></a><span class="sd"> Specify the indentation level of the json file. None or 0 is permissible and</span>
</span><span id="L-647"><a href="#L-647"><span class="linenos">647</span></a><span class="sd"> saves disk space.</span>
</span><span id="L-648"><a href="#L-648"><span class="linenos">648</span></a><span class="sd"> reps : str</span>
</span><span id="L-649"><a href="#L-649"><span class="linenos">649</span></a><span class="sd"> Specify the structure of the placeholder in exported dict to be reps[0-9]+.</span>
</span><span id="L-650"><a href="#L-650"><span class="linenos">650</span></a><span class="sd"> gz : bool</span>
</span><span id="L-651"><a href="#L-651"><span class="linenos">651</span></a><span class="sd"> If True, the output is a gzipped json. If False, the output is a json file.</span>
</span><span id="L-652"><a href="#L-652"><span class="linenos">652</span></a>
</span><span id="L-653"><a href="#L-653"><span class="linenos">653</span></a><span class="sd"> Returns</span>
</span><span id="L-654"><a href="#L-654"><span class="linenos">654</span></a><span class="sd"> -------</span>
</span><span id="L-655"><a href="#L-655"><span class="linenos">655</span></a><span class="sd"> None</span>
</span><span id="L-656"><a href="#L-656"><span class="linenos">656</span></a><span class="sd"> """</span>
</span><span id="L-657"><a href="#L-657"><span class="linenos">657</span></a>
</span><span id="L-658"><a href="#L-658"><span class="linenos">658</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">od</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-659"><a href="#L-659"><span class="linenos">659</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'od has to be a dictionary. Did you want to use dump_to_json?'</span><span class="p">)</span>
</span><span id="L-660"><a href="#L-660"><span class="linenos">660</span></a>
</span><span id="L-661"><a href="#L-661"><span class="linenos">661</span></a> <span class="n">infostring</span> <span class="o">=</span> <span class="p">(</span><span class="s1">'This JSON file contains a python dictionary that has been parsed to a list of structures. '</span>
</span><span id="L-662"><a href="#L-662"><span class="linenos">662</span></a> <span class="s1">'OBSDICT contains the dictionary, where Obs or other structures have been replaced by '</span>
</span><span id="L-663"><a href="#L-663"><span class="linenos">663</span></a> <span class="s1">''</span> <span class="o">+</span> <span class="n">reps</span> <span class="o">+</span> <span class="s1">'[0-9]+. The field description contains the additional description of this JSON file. '</span>
</span><span id="L-664"><a href="#L-664"><span class="linenos">664</span></a> <span class="s1">'This file may be parsed to a dict with the pyerrors routine load_json_dict.'</span><span class="p">)</span>
</span><span id="L-665"><a href="#L-665"><span class="linenos">665</span></a>
</span><span id="L-666"><a href="#L-666"><span class="linenos">666</span></a> <span class="n">desc_dict</span> <span class="o">=</span> <span class="p">{</span><span class="s1">'INFO'</span><span class="p">:</span> <span class="n">infostring</span><span class="p">,</span> <span class="s1">'OBSDICT'</span><span class="p">:</span> <span class="p">{},</span> <span class="s1">'description'</span><span class="p">:</span> <span class="n">description</span><span class="p">}</span>
</span><span id="L-667"><a href="#L-667"><span class="linenos">667</span></a> <span class="n">ol</span><span class="p">,</span> <span class="n">desc_dict</span><span class="p">[</span><span class="s1">'OBSDICT'</span><span class="p">]</span> <span class="o">=</span> <span class="n">_ol_from_dict</span><span class="p">(</span><span class="n">od</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="n">reps</span><span class="p">)</span>
</span><span id="L-668"><a href="#L-668"><span class="linenos">668</span></a>
</span><span id="L-669"><a href="#L-669"><span class="linenos">669</span></a> <span class="n">dump_to_json</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="n">desc_dict</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="n">indent</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="n">gz</span><span class="p">)</span>
</span><span id="L-670"><a href="#L-670"><span class="linenos">670</span></a>
</span><span id="L-671"><a href="#L-671"><span class="linenos">671</span></a>
</span><span id="L-672"><a href="#L-672"><span class="linenos">672</span></a><span class="k">def</span><span class="w"> </span><span class="nf">_od_from_list_and_dict</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">ind</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span><span class="p">):</span>
</span><span id="L-673"><a href="#L-673"><span class="linenos">673</span></a><span class="w"> </span><span class="sd">"""Parse a list of Obs or structures containing Obs and an accompanying</span>
</span><span id="L-674"><a href="#L-674"><span class="linenos">674</span></a><span class="sd"> dict, where the structures have been replaced by placeholders to a</span>
</span><span id="L-675"><a href="#L-675"><span class="linenos">675</span></a><span class="sd"> dict that contains the structures.</span>
</span><span id="L-676"><a href="#L-676"><span class="linenos">676</span></a>
</span><span id="L-677"><a href="#L-677"><span class="linenos">677</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="L-678"><a href="#L-678"><span class="linenos">678</span></a>
</span><span id="L-679"><a href="#L-679"><span class="linenos">679</span></a><span class="sd"> Parameters</span>
</span><span id="L-680"><a href="#L-680"><span class="linenos">680</span></a><span class="sd"> ----------</span>
</span><span id="L-681"><a href="#L-681"><span class="linenos">681</span></a><span class="sd"> ol : list</span>
</span><span id="L-682"><a href="#L-682"><span class="linenos">682</span></a><span class="sd"> List of objects -</span>
</span><span id="L-683"><a href="#L-683"><span class="linenos">683</span></a><span class="sd"> At the moment, these objects can be either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="L-684"><a href="#L-684"><span class="linenos">684</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="L-685"><a href="#L-685"><span class="linenos">685</span></a><span class="sd"> ind : dict</span>
</span><span id="L-686"><a href="#L-686"><span class="linenos">686</span></a><span class="sd"> Dict that defines the structure of the resulting dict and contains placeholders</span>
</span><span id="L-687"><a href="#L-687"><span class="linenos">687</span></a><span class="sd"> reps : str</span>
</span><span id="L-688"><a href="#L-688"><span class="linenos">688</span></a><span class="sd"> Specify the structure of the placeholder in imported dict to be reps[0-9]+.</span>
</span><span id="L-689"><a href="#L-689"><span class="linenos">689</span></a><span class="sd"> """</span>
</span><span id="L-690"><a href="#L-690"><span class="linenos">690</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">reps</span><span class="o">.</span><span class="n">isalnum</span><span class="p">():</span>
</span><span id="L-691"><a href="#L-691"><span class="linenos">691</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Placeholder string has to be alphanumeric!'</span><span class="p">)</span>
</span><span id="L-692"><a href="#L-692"><span class="linenos">692</span></a>
</span><span id="L-693"><a href="#L-693"><span class="linenos">693</span></a> <span class="n">counter</span> <span class="o">=</span> <span class="mi">0</span>
</span><span id="L-694"><a href="#L-694"><span class="linenos">694</span></a>
</span><span id="L-695"><a href="#L-695"><span class="linenos">695</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">dict_replace_string</span><span class="p">(</span><span class="n">d</span><span class="p">):</span>
</span><span id="L-696"><a href="#L-696"><span class="linenos">696</span></a> <span class="k">nonlocal</span> <span class="n">counter</span>
</span><span id="L-697"><a href="#L-697"><span class="linenos">697</span></a> <span class="k">nonlocal</span> <span class="n">ol</span>
</span><span id="L-698"><a href="#L-698"><span class="linenos">698</span></a> <span class="n">x</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="L-699"><a href="#L-699"><span class="linenos">699</span></a> <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">d</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
</span><span id="L-700"><a href="#L-700"><span class="linenos">700</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-701"><a href="#L-701"><span class="linenos">701</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">dict_replace_string</span><span class="p">(</span><span class="n">v</span><span class="p">)</span>
</span><span id="L-702"><a href="#L-702"><span class="linenos">702</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="L-703"><a href="#L-703"><span class="linenos">703</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">list_replace_string</span><span class="p">(</span><span class="n">v</span><span class="p">)</span>
</span><span id="L-704"><a href="#L-704"><span class="linenos">704</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">v</span><span class="p">,</span> <span class="nb">str</span><span class="p">)</span> <span class="ow">and</span> <span class="nb">bool</span><span class="p">(</span><span class="n">re</span><span class="o">.</span><span class="n">match</span><span class="p">(</span><span class="sa">r</span><span class="s1">'</span><span class="si">%s</span><span class="s1">[0-9]+'</span> <span class="o">%</span> <span class="p">(</span><span class="n">reps</span><span class="p">),</span> <span class="n">v</span><span class="p">)):</span>
</span><span id="L-705"><a href="#L-705"><span class="linenos">705</span></a> <span class="n">index</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">v</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="n">reps</span><span class="p">):])</span>
</span><span id="L-706"><a href="#L-706"><span class="linenos">706</span></a> <span class="n">v</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="n">index</span><span class="p">]</span>
</span><span id="L-707"><a href="#L-707"><span class="linenos">707</span></a> <span class="n">counter</span> <span class="o">+=</span> <span class="mi">1</span>
</span><span id="L-708"><a href="#L-708"><span class="linenos">708</span></a> <span class="n">x</span><span class="p">[</span><span class="n">k</span><span class="p">]</span> <span class="o">=</span> <span class="n">v</span>
</span><span id="L-709"><a href="#L-709"><span class="linenos">709</span></a> <span class="k">return</span> <span class="n">x</span>
</span><span id="L-710"><a href="#L-710"><span class="linenos">710</span></a>
</span><span id="L-711"><a href="#L-711"><span class="linenos">711</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">list_replace_string</span><span class="p">(</span><span class="n">li</span><span class="p">):</span>
</span><span id="L-712"><a href="#L-712"><span class="linenos">712</span></a> <span class="k">nonlocal</span> <span class="n">counter</span>
</span><span id="L-713"><a href="#L-713"><span class="linenos">713</span></a> <span class="k">nonlocal</span> <span class="n">ol</span>
</span><span id="L-714"><a href="#L-714"><span class="linenos">714</span></a> <span class="n">x</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="L-715"><a href="#L-715"><span class="linenos">715</span></a> <span class="k">for</span> <span class="n">e</span> <span class="ow">in</span> <span class="n">li</span><span class="p">:</span>
</span><span id="L-716"><a href="#L-716"><span class="linenos">716</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="L-717"><a href="#L-717"><span class="linenos">717</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">list_replace_string</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-718"><a href="#L-718"><span class="linenos">718</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="L-719"><a href="#L-719"><span class="linenos">719</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">dict_replace_string</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-720"><a href="#L-720"><span class="linenos">720</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">e</span><span class="p">,</span> <span class="nb">str</span><span class="p">)</span> <span class="ow">and</span> <span class="nb">bool</span><span class="p">(</span><span class="n">re</span><span class="o">.</span><span class="n">match</span><span class="p">(</span><span class="sa">r</span><span class="s1">'</span><span class="si">%s</span><span class="s1">[0-9]+'</span> <span class="o">%</span> <span class="p">(</span><span class="n">reps</span><span class="p">),</span> <span class="n">e</span><span class="p">)):</span>
</span><span id="L-721"><a href="#L-721"><span class="linenos">721</span></a> <span class="n">index</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">e</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="n">reps</span><span class="p">):])</span>
</span><span id="L-722"><a href="#L-722"><span class="linenos">722</span></a> <span class="n">e</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="n">index</span><span class="p">]</span>
</span><span id="L-723"><a href="#L-723"><span class="linenos">723</span></a> <span class="n">counter</span> <span class="o">+=</span> <span class="mi">1</span>
</span><span id="L-724"><a href="#L-724"><span class="linenos">724</span></a> <span class="n">x</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
</span><span id="L-725"><a href="#L-725"><span class="linenos">725</span></a> <span class="k">return</span> <span class="n">x</span>
</span><span id="L-726"><a href="#L-726"><span class="linenos">726</span></a>
</span><span id="L-727"><a href="#L-727"><span class="linenos">727</span></a> <span class="n">nd</span> <span class="o">=</span> <span class="n">dict_replace_string</span><span class="p">(</span><span class="n">ind</span><span class="p">)</span>
</span><span id="L-728"><a href="#L-728"><span class="linenos">728</span></a>
</span><span id="L-729"><a href="#L-729"><span class="linenos">729</span></a> <span class="k">if</span> <span class="n">counter</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
</span><span id="L-730"><a href="#L-730"><span class="linenos">730</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'No placeholder has been replaced! Check if reps is set correctly.'</span><span class="p">)</span>
</span><span id="L-731"><a href="#L-731"><span class="linenos">731</span></a>
</span><span id="L-732"><a href="#L-732"><span class="linenos">732</span></a> <span class="k">return</span> <span class="n">nd</span>
</span><span id="L-733"><a href="#L-733"><span class="linenos">733</span></a>
</span><span id="L-734"><a href="#L-734"><span class="linenos">734</span></a>
</span><span id="L-735"><a href="#L-735"><span class="linenos">735</span></a><span class="k">def</span><span class="w"> </span><span class="nf">load_json_dict</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span><span class="p">):</span>
</span><span id="L-736"><a href="#L-736"><span class="linenos">736</span></a><span class="w"> </span><span class="sd">"""Import a dict of Obs or structures containing Obs from a .json(.gz) file.</span>
</span><span id="L-737"><a href="#L-737"><span class="linenos">737</span></a>
</span><span id="L-738"><a href="#L-738"><span class="linenos">738</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="L-739"><a href="#L-739"><span class="linenos">739</span></a>
</span><span id="L-740"><a href="#L-740"><span class="linenos">740</span></a><span class="sd"> Parameters</span>
</span><span id="L-741"><a href="#L-741"><span class="linenos">741</span></a><span class="sd"> ----------</span>
</span><span id="L-742"><a href="#L-742"><span class="linenos">742</span></a><span class="sd"> fname : str</span>
</span><span id="L-743"><a href="#L-743"><span class="linenos">743</span></a><span class="sd"> Filename of the input file.</span>
</span><span id="L-744"><a href="#L-744"><span class="linenos">744</span></a><span class="sd"> verbose : bool</span>
</span><span id="L-745"><a href="#L-745"><span class="linenos">745</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="L-746"><a href="#L-746"><span class="linenos">746</span></a><span class="sd"> gz : bool</span>
</span><span id="L-747"><a href="#L-747"><span class="linenos">747</span></a><span class="sd"> If True, assumes that data is gzipped. If False, assumes JSON file.</span>
</span><span id="L-748"><a href="#L-748"><span class="linenos">748</span></a><span class="sd"> full_output : bool</span>
</span><span id="L-749"><a href="#L-749"><span class="linenos">749</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="L-750"><a href="#L-750"><span class="linenos">750</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="L-751"><a href="#L-751"><span class="linenos">751</span></a><span class="sd"> reps : str</span>
</span><span id="L-752"><a href="#L-752"><span class="linenos">752</span></a><span class="sd"> Specify the structure of the placeholder in imported dict to be reps[0-9]+.</span>
</span><span id="L-753"><a href="#L-753"><span class="linenos">753</span></a>
</span><span id="L-754"><a href="#L-754"><span class="linenos">754</span></a><span class="sd"> Returns</span>
</span><span id="L-755"><a href="#L-755"><span class="linenos">755</span></a><span class="sd"> -------</span>
</span><span id="L-756"><a href="#L-756"><span class="linenos">756</span></a><span class="sd"> data : Obs / list / Corr</span>
</span><span id="L-757"><a href="#L-757"><span class="linenos">757</span></a><span class="sd"> Read data</span>
</span><span id="L-758"><a href="#L-758"><span class="linenos">758</span></a><span class="sd"> or</span>
</span><span id="L-759"><a href="#L-759"><span class="linenos">759</span></a><span class="sd"> data : dict</span>
</span><span id="L-760"><a href="#L-760"><span class="linenos">760</span></a><span class="sd"> Read data and meta-data</span>
</span><span id="L-761"><a href="#L-761"><span class="linenos">761</span></a><span class="sd"> """</span>
</span><span id="L-762"><a href="#L-762"><span class="linenos">762</span></a> <span class="n">indata</span> <span class="o">=</span> <span class="n">load_json</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="n">verbose</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="n">gz</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
</span><span id="L-763"><a href="#L-763"><span class="linenos">763</span></a> <span class="n">description</span> <span class="o">=</span> <span class="n">indata</span><span class="p">[</span><span class="s1">'description'</span><span class="p">][</span><span class="s1">'description'</span><span class="p">]</span>
</span><span id="L-764"><a href="#L-764"><span class="linenos">764</span></a> <span class="n">indict</span> <span class="o">=</span> <span class="n">indata</span><span class="p">[</span><span class="s1">'description'</span><span class="p">][</span><span class="s1">'OBSDICT'</span><span class="p">]</span>
</span><span id="L-765"><a href="#L-765"><span class="linenos">765</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="n">indata</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span>
</span><span id="L-766"><a href="#L-766"><span class="linenos">766</span></a> <span class="n">od</span> <span class="o">=</span> <span class="n">_od_from_list_and_dict</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">indict</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="n">reps</span><span class="p">)</span>
</span><span id="L-767"><a href="#L-767"><span class="linenos">767</span></a>
</span><span id="L-768"><a href="#L-768"><span class="linenos">768</span></a> <span class="k">if</span> <span class="n">full_output</span><span class="p">:</span>
</span><span id="L-769"><a href="#L-769"><span class="linenos">769</span></a> <span class="n">indata</span><span class="p">[</span><span class="s1">'description'</span><span class="p">]</span> <span class="o">=</span> <span class="n">description</span>
</span><span id="L-770"><a href="#L-770"><span class="linenos">770</span></a> <span class="n">indata</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">od</span>
</span><span id="L-771"><a href="#L-771"><span class="linenos">771</span></a> <span class="k">return</span> <span class="n">indata</span>
</span><span id="L-772"><a href="#L-772"><span class="linenos">772</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="L-773"><a href="#L-773"><span class="linenos">773</span></a> <span class="k">return</span> <span class="n">od</span>
</span></pre></div>
</section>
<section id="create_json_string">
<input id="create_json_string-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<div class="attr function">
<span class="def">def</span>
<span class="name">create_json_string</span><span class="signature pdoc-code condensed">(<span class="param"><span class="n">ol</span>, </span><span class="param"><span class="n">description</span><span class="o">=</span><span class="s1">''</span>, </span><span class="param"><span class="n">indent</span><span class="o">=</span><span class="mi">1</span></span><span class="return-annotation">):</span></span>
<label class="view-source-button" for="create_json_string-view-source"><span>View Source</span></label>
</div>
<a class="headerlink" href="#create_json_string"></a>
<div class="pdoc-code codehilite"><pre><span></span><span id="create_json_string-18"><a href="#create_json_string-18"><span class="linenos"> 18</span></a><span class="k">def</span><span class="w"> </span><span class="nf">create_json_string</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="s1">''</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="mi">1</span><span class="p">):</span>
</span><span id="create_json_string-19"><a href="#create_json_string-19"><span class="linenos"> 19</span></a><span class="w"> </span><span class="sd">"""Generate the string for the export of a list of Obs or structures containing Obs</span>
</span><span id="create_json_string-20"><a href="#create_json_string-20"><span class="linenos"> 20</span></a><span class="sd"> to a .json(.gz) file</span>
</span><span id="create_json_string-21"><a href="#create_json_string-21"><span class="linenos"> 21</span></a>
</span><span id="create_json_string-22"><a href="#create_json_string-22"><span class="linenos"> 22</span></a><span class="sd"> Parameters</span>
</span><span id="create_json_string-23"><a href="#create_json_string-23"><span class="linenos"> 23</span></a><span class="sd"> ----------</span>
</span><span id="create_json_string-24"><a href="#create_json_string-24"><span class="linenos"> 24</span></a><span class="sd"> ol : list</span>
</span><span id="create_json_string-25"><a href="#create_json_string-25"><span class="linenos"> 25</span></a><span class="sd"> List of objects that will be exported. At the moment, these objects can be</span>
</span><span id="create_json_string-26"><a href="#create_json_string-26"><span class="linenos"> 26</span></a><span class="sd"> either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="create_json_string-27"><a href="#create_json_string-27"><span class="linenos"> 27</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="create_json_string-28"><a href="#create_json_string-28"><span class="linenos"> 28</span></a><span class="sd"> description : str</span>
</span><span id="create_json_string-29"><a href="#create_json_string-29"><span class="linenos"> 29</span></a><span class="sd"> Optional string that describes the contents of the json file.</span>
</span><span id="create_json_string-30"><a href="#create_json_string-30"><span class="linenos"> 30</span></a><span class="sd"> indent : int</span>
</span><span id="create_json_string-31"><a href="#create_json_string-31"><span class="linenos"> 31</span></a><span class="sd"> Specify the indentation level of the json file. None or 0 is permissible and</span>
</span><span id="create_json_string-32"><a href="#create_json_string-32"><span class="linenos"> 32</span></a><span class="sd"> saves disk space.</span>
</span><span id="create_json_string-33"><a href="#create_json_string-33"><span class="linenos"> 33</span></a>
</span><span id="create_json_string-34"><a href="#create_json_string-34"><span class="linenos"> 34</span></a><span class="sd"> Returns</span>
</span><span id="create_json_string-35"><a href="#create_json_string-35"><span class="linenos"> 35</span></a><span class="sd"> -------</span>
</span><span id="create_json_string-36"><a href="#create_json_string-36"><span class="linenos"> 36</span></a><span class="sd"> json_string : str</span>
</span><span id="create_json_string-37"><a href="#create_json_string-37"><span class="linenos"> 37</span></a><span class="sd"> String for export to .json(.gz) file</span>
</span><span id="create_json_string-38"><a href="#create_json_string-38"><span class="linenos"> 38</span></a><span class="sd"> """</span>
</span><span id="create_json_string-39"><a href="#create_json_string-39"><span class="linenos"> 39</span></a>
</span><span id="create_json_string-40"><a href="#create_json_string-40"><span class="linenos"> 40</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_gen_data_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">):</span>
</span><span id="create_json_string-41"><a href="#create_json_string-41"><span class="linenos"> 41</span></a> <span class="n">dl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-42"><a href="#create_json_string-42"><span class="linenos"> 42</span></a> <span class="n">No</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-43"><a href="#create_json_string-43"><span class="linenos"> 43</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">mc_names</span><span class="p">:</span>
</span><span id="create_json_string-44"><a href="#create_json_string-44"><span class="linenos"> 44</span></a> <span class="n">ed</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-45"><a href="#create_json_string-45"><span class="linenos"> 45</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'id'</span><span class="p">]</span> <span class="o">=</span> <span class="n">name</span>
</span><span id="create_json_string-46"><a href="#create_json_string-46"><span class="linenos"> 46</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'replica'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-47"><a href="#create_json_string-47"><span class="linenos"> 47</span></a> <span class="k">for</span> <span class="n">r_name</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">e_content</span><span class="p">[</span><span class="n">name</span><span class="p">]:</span>
</span><span id="create_json_string-48"><a href="#create_json_string-48"><span class="linenos"> 48</span></a> <span class="n">rd</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-49"><a href="#create_json_string-49"><span class="linenos"> 49</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'name'</span><span class="p">]</span> <span class="o">=</span> <span class="n">r_name</span>
</span><span id="create_json_string-50"><a href="#create_json_string-50"><span class="linenos"> 50</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-51"><a href="#create_json_string-51"><span class="linenos"> 51</span></a> <span class="n">offsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">r_values</span><span class="p">[</span><span class="n">r_name</span><span class="p">]</span> <span class="o">-</span> <span class="n">o</span><span class="o">.</span><span class="n">value</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="create_json_string-52"><a href="#create_json_string-52"><span class="linenos"> 52</span></a> <span class="n">deltas</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">column_stack</span><span class="p">([</span><span class="n">ol</span><span class="p">[</span><span class="n">oi</span><span class="p">]</span><span class="o">.</span><span class="n">deltas</span><span class="p">[</span><span class="n">r_name</span><span class="p">]</span> <span class="o">+</span> <span class="n">offsets</span><span class="p">[</span><span class="n">oi</span><span class="p">]</span> <span class="k">for</span> <span class="n">oi</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">No</span><span class="p">)])</span>
</span><span id="create_json_string-53"><a href="#create_json_string-53"><span class="linenos"> 53</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">idl</span><span class="p">[</span><span class="n">r_name</span><span class="p">])):</span>
</span><span id="create_json_string-54"><a href="#create_json_string-54"><span class="linenos"> 54</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">idl</span><span class="p">[</span><span class="n">r_name</span><span class="p">][</span><span class="n">i</span><span class="p">]])</span>
</span><span id="create_json_string-55"><a href="#create_json_string-55"><span class="linenos"> 55</span></a> <span class="n">rd</span><span class="p">[</span><span class="s1">'deltas'</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+=</span> <span class="n">deltas</span><span class="p">[</span><span class="n">i</span><span class="p">]</span><span class="o">.</span><span class="n">tolist</span><span class="p">()</span>
</span><span id="create_json_string-56"><a href="#create_json_string-56"><span class="linenos"> 56</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'replica'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">rd</span><span class="p">)</span>
</span><span id="create_json_string-57"><a href="#create_json_string-57"><span class="linenos"> 57</span></a> <span class="n">dl</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">ed</span><span class="p">)</span>
</span><span id="create_json_string-58"><a href="#create_json_string-58"><span class="linenos"> 58</span></a> <span class="k">return</span> <span class="n">dl</span>
</span><span id="create_json_string-59"><a href="#create_json_string-59"><span class="linenos"> 59</span></a>
</span><span id="create_json_string-60"><a href="#create_json_string-60"><span class="linenos"> 60</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_gen_cdata_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">):</span>
</span><span id="create_json_string-61"><a href="#create_json_string-61"><span class="linenos"> 61</span></a> <span class="n">dl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-62"><a href="#create_json_string-62"><span class="linenos"> 62</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">cov_names</span><span class="p">:</span>
</span><span id="create_json_string-63"><a href="#create_json_string-63"><span class="linenos"> 63</span></a> <span class="n">ed</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-64"><a href="#create_json_string-64"><span class="linenos"> 64</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'id'</span><span class="p">]</span> <span class="o">=</span> <span class="n">name</span>
</span><span id="create_json_string-65"><a href="#create_json_string-65"><span class="linenos"> 65</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">cov</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span><span class="o">.</span><span class="n">lstrip</span><span class="p">(</span><span class="s1">'('</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">')'</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">','</span><span class="p">)</span>
</span><span id="create_json_string-66"><a href="#create_json_string-66"><span class="linenos"> 66</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'cov'</span><span class="p">]</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">ravel</span><span class="p">(</span><span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">cov</span><span class="p">))</span>
</span><span id="create_json_string-67"><a href="#create_json_string-67"><span class="linenos"> 67</span></a> <span class="n">ncov</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">cov</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
</span><span id="create_json_string-68"><a href="#create_json_string-68"><span class="linenos"> 68</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-69"><a href="#create_json_string-69"><span class="linenos"> 69</span></a> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">ncov</span><span class="p">):</span>
</span><span id="create_json_string-70"><a href="#create_json_string-70"><span class="linenos"> 70</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">([])</span>
</span><span id="create_json_string-71"><a href="#create_json_string-71"><span class="linenos"> 71</span></a> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">:</span>
</span><span id="create_json_string-72"><a href="#create_json_string-72"><span class="linenos"> 72</span></a> <span class="n">ed</span><span class="p">[</span><span class="s1">'grad'</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">o</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">name</span><span class="p">]</span><span class="o">.</span><span class="n">grad</span><span class="p">[</span><span class="n">i</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span>
</span><span id="create_json_string-73"><a href="#create_json_string-73"><span class="linenos"> 73</span></a> <span class="n">dl</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">ed</span><span class="p">)</span>
</span><span id="create_json_string-74"><a href="#create_json_string-74"><span class="linenos"> 74</span></a> <span class="k">return</span> <span class="n">dl</span>
</span><span id="create_json_string-75"><a href="#create_json_string-75"><span class="linenos"> 75</span></a>
</span><span id="create_json_string-76"><a href="#create_json_string-76"><span class="linenos"> 76</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_Obs_to_dict</span><span class="p">(</span><span class="n">o</span><span class="p">):</span>
</span><span id="create_json_string-77"><a href="#create_json_string-77"><span class="linenos"> 77</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-78"><a href="#create_json_string-78"><span class="linenos"> 78</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'Obs'</span>
</span><span id="create_json_string-79"><a href="#create_json_string-79"><span class="linenos"> 79</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'1'</span>
</span><span id="create_json_string-80"><a href="#create_json_string-80"><span class="linenos"> 80</span></a> <span class="k">if</span> <span class="n">o</span><span class="o">.</span><span class="n">tag</span><span class="p">:</span>
</span><span id="create_json_string-81"><a href="#create_json_string-81"><span class="linenos"> 81</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">tag</span><span class="p">]</span>
</span><span id="create_json_string-82"><a href="#create_json_string-82"><span class="linenos"> 82</span></a> <span class="k">if</span> <span class="n">o</span><span class="o">.</span><span class="n">reweighted</span><span class="p">:</span>
</span><span id="create_json_string-83"><a href="#create_json_string-83"><span class="linenos"> 83</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'reweighted'</span><span class="p">]</span> <span class="o">=</span> <span class="n">o</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="create_json_string-84"><a href="#create_json_string-84"><span class="linenos"> 84</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">value</span><span class="p">]</span>
</span><span id="create_json_string-85"><a href="#create_json_string-85"><span class="linenos"> 85</span></a> <span class="n">data</span> <span class="o">=</span> <span class="n">_gen_data_d_from_list</span><span class="p">([</span><span class="n">o</span><span class="p">])</span>
</span><span id="create_json_string-86"><a href="#create_json_string-86"><span class="linenos"> 86</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="create_json_string-87"><a href="#create_json_string-87"><span class="linenos"> 87</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'data'</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span>
</span><span id="create_json_string-88"><a href="#create_json_string-88"><span class="linenos"> 88</span></a> <span class="n">cdata</span> <span class="o">=</span> <span class="n">_gen_cdata_d_from_list</span><span class="p">([</span><span class="n">o</span><span class="p">])</span>
</span><span id="create_json_string-89"><a href="#create_json_string-89"><span class="linenos"> 89</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">cdata</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="create_json_string-90"><a href="#create_json_string-90"><span class="linenos"> 90</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'cdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">cdata</span>
</span><span id="create_json_string-91"><a href="#create_json_string-91"><span class="linenos"> 91</span></a> <span class="k">return</span> <span class="n">d</span>
</span><span id="create_json_string-92"><a href="#create_json_string-92"><span class="linenos"> 92</span></a>
</span><span id="create_json_string-93"><a href="#create_json_string-93"><span class="linenos"> 93</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_List_to_dict</span><span class="p">(</span><span class="n">ol</span><span class="p">):</span>
</span><span id="create_json_string-94"><a href="#create_json_string-94"><span class="linenos"> 94</span></a> <span class="n">_assert_equal_properties</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-95"><a href="#create_json_string-95"><span class="linenos"> 95</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-96"><a href="#create_json_string-96"><span class="linenos"> 96</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'List'</span>
</span><span id="create_json_string-97"><a href="#create_json_string-97"><span class="linenos"> 97</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'</span><span class="si">%d</span><span class="s1">'</span> <span class="o">%</span> <span class="nb">len</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-98"><a href="#create_json_string-98"><span class="linenos"> 98</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">tag</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="create_json_string-99"><a href="#create_json_string-99"><span class="linenos"> 99</span></a> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">any</span><span class="p">([</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="k">for</span> <span class="n">tag</span> <span class="ow">in</span> <span class="n">taglist</span><span class="p">]):</span>
</span><span id="create_json_string-100"><a href="#create_json_string-100"><span class="linenos">100</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span>
</span><span id="create_json_string-101"><a href="#create_json_string-101"><span class="linenos">101</span></a> <span class="k">if</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span><span class="p">:</span>
</span><span id="create_json_string-102"><a href="#create_json_string-102"><span class="linenos">102</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'reweighted'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="create_json_string-103"><a href="#create_json_string-103"><span class="linenos">103</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">value</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="create_json_string-104"><a href="#create_json_string-104"><span class="linenos">104</span></a> <span class="n">data</span> <span class="o">=</span> <span class="n">_gen_data_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-105"><a href="#create_json_string-105"><span class="linenos">105</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="create_json_string-106"><a href="#create_json_string-106"><span class="linenos">106</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'data'</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span>
</span><span id="create_json_string-107"><a href="#create_json_string-107"><span class="linenos">107</span></a> <span class="n">cdata</span> <span class="o">=</span> <span class="n">_gen_cdata_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-108"><a href="#create_json_string-108"><span class="linenos">108</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">cdata</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="create_json_string-109"><a href="#create_json_string-109"><span class="linenos">109</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'cdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">cdata</span>
</span><span id="create_json_string-110"><a href="#create_json_string-110"><span class="linenos">110</span></a> <span class="k">return</span> <span class="n">d</span>
</span><span id="create_json_string-111"><a href="#create_json_string-111"><span class="linenos">111</span></a>
</span><span id="create_json_string-112"><a href="#create_json_string-112"><span class="linenos">112</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_Array_to_dict</span><span class="p">(</span><span class="n">oa</span><span class="p">):</span>
</span><span id="create_json_string-113"><a href="#create_json_string-113"><span class="linenos">113</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">ravel</span><span class="p">(</span><span class="n">oa</span><span class="p">)</span>
</span><span id="create_json_string-114"><a href="#create_json_string-114"><span class="linenos">114</span></a> <span class="n">_assert_equal_properties</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-115"><a href="#create_json_string-115"><span class="linenos">115</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-116"><a href="#create_json_string-116"><span class="linenos">116</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'Array'</span>
</span><span id="create_json_string-117"><a href="#create_json_string-117"><span class="linenos">117</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'layout'</span><span class="p">]</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">oa</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span><span class="o">.</span><span class="n">lstrip</span><span class="p">(</span><span class="s1">'('</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">')'</span><span class="p">)</span><span class="o">.</span><span class="n">rstrip</span><span class="p">(</span><span class="s1">','</span><span class="p">)</span>
</span><span id="create_json_string-118"><a href="#create_json_string-118"><span class="linenos">118</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">tag</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="create_json_string-119"><a href="#create_json_string-119"><span class="linenos">119</span></a> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">any</span><span class="p">([</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="k">for</span> <span class="n">tag</span> <span class="ow">in</span> <span class="n">taglist</span><span class="p">]):</span>
</span><span id="create_json_string-120"><a href="#create_json_string-120"><span class="linenos">120</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span>
</span><span id="create_json_string-121"><a href="#create_json_string-121"><span class="linenos">121</span></a> <span class="k">if</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span><span class="p">:</span>
</span><span id="create_json_string-122"><a href="#create_json_string-122"><span class="linenos">122</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'reweighted'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ol</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="create_json_string-123"><a href="#create_json_string-123"><span class="linenos">123</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'value'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span><span class="o">.</span><span class="n">value</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">]</span>
</span><span id="create_json_string-124"><a href="#create_json_string-124"><span class="linenos">124</span></a> <span class="n">data</span> <span class="o">=</span> <span class="n">_gen_data_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-125"><a href="#create_json_string-125"><span class="linenos">125</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="create_json_string-126"><a href="#create_json_string-126"><span class="linenos">126</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'data'</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span>
</span><span id="create_json_string-127"><a href="#create_json_string-127"><span class="linenos">127</span></a> <span class="n">cdata</span> <span class="o">=</span> <span class="n">_gen_cdata_d_from_list</span><span class="p">(</span><span class="n">ol</span><span class="p">)</span>
</span><span id="create_json_string-128"><a href="#create_json_string-128"><span class="linenos">128</span></a> <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">cdata</span><span class="p">)</span> <span class="o">></span> <span class="mi">0</span><span class="p">:</span>
</span><span id="create_json_string-129"><a href="#create_json_string-129"><span class="linenos">129</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'cdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">cdata</span>
</span><span id="create_json_string-130"><a href="#create_json_string-130"><span class="linenos">130</span></a> <span class="k">return</span> <span class="n">d</span>
</span><span id="create_json_string-131"><a href="#create_json_string-131"><span class="linenos">131</span></a>
</span><span id="create_json_string-132"><a href="#create_json_string-132"><span class="linenos">132</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_nan_Obs_like</span><span class="p">(</span><span class="n">obs</span><span class="p">):</span>
</span><span id="create_json_string-133"><a href="#create_json_string-133"><span class="linenos">133</span></a> <span class="n">samples</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-134"><a href="#create_json_string-134"><span class="linenos">134</span></a> <span class="n">names</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-135"><a href="#create_json_string-135"><span class="linenos">135</span></a> <span class="n">idl</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-136"><a href="#create_json_string-136"><span class="linenos">136</span></a> <span class="k">for</span> <span class="n">key</span><span class="p">,</span> <span class="n">value</span> <span class="ow">in</span> <span class="n">obs</span><span class="o">.</span><span class="n">idl</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
</span><span id="create_json_string-137"><a href="#create_json_string-137"><span class="linenos">137</span></a> <span class="n">samples</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="n">np</span><span class="o">.</span><span class="n">nan</span><span class="p">]</span> <span class="o">*</span> <span class="nb">len</span><span class="p">(</span><span class="n">value</span><span class="p">)))</span>
</span><span id="create_json_string-138"><a href="#create_json_string-138"><span class="linenos">138</span></a> <span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">key</span><span class="p">)</span>
</span><span id="create_json_string-139"><a href="#create_json_string-139"><span class="linenos">139</span></a> <span class="n">idl</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">value</span><span class="p">)</span>
</span><span id="create_json_string-140"><a href="#create_json_string-140"><span class="linenos">140</span></a> <span class="n">my_obs</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">(</span><span class="n">samples</span><span class="p">,</span> <span class="n">names</span><span class="p">,</span> <span class="n">idl</span><span class="p">,</span> <span class="n">means</span><span class="o">=</span><span class="p">[</span><span class="n">np</span><span class="o">.</span><span class="n">nan</span> <span class="k">for</span> <span class="n">n</span> <span class="ow">in</span> <span class="n">names</span><span class="p">])</span>
</span><span id="create_json_string-141"><a href="#create_json_string-141"><span class="linenos">141</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
</span><span id="create_json_string-142"><a href="#create_json_string-142"><span class="linenos">142</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">_covobs</span> <span class="o">=</span> <span class="n">obs</span><span class="o">.</span><span class="n">_covobs</span>
</span><span id="create_json_string-143"><a href="#create_json_string-143"><span class="linenos">143</span></a> <span class="k">for</span> <span class="n">name</span> <span class="ow">in</span> <span class="n">obs</span><span class="o">.</span><span class="n">_covobs</span><span class="p">:</span>
</span><span id="create_json_string-144"><a href="#create_json_string-144"><span class="linenos">144</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">name</span><span class="p">)</span>
</span><span id="create_json_string-145"><a href="#create_json_string-145"><span class="linenos">145</span></a> <span class="n">my_obs</span><span class="o">.</span><span class="n">reweighted</span> <span class="o">=</span> <span class="n">obs</span><span class="o">.</span><span class="n">reweighted</span>
</span><span id="create_json_string-146"><a href="#create_json_string-146"><span class="linenos">146</span></a> <span class="k">return</span> <span class="n">my_obs</span>
</span><span id="create_json_string-147"><a href="#create_json_string-147"><span class="linenos">147</span></a>
</span><span id="create_json_string-148"><a href="#create_json_string-148"><span class="linenos">148</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">write_Corr_to_dict</span><span class="p">(</span><span class="n">my_corr</span><span class="p">):</span>
</span><span id="create_json_string-149"><a href="#create_json_string-149"><span class="linenos">149</span></a> <span class="n">first_not_none</span> <span class="o">=</span> <span class="nb">next</span><span class="p">(</span><span class="n">i</span> <span class="k">for</span> <span class="n">i</span><span class="p">,</span> <span class="n">j</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">my_corr</span><span class="o">.</span><span class="n">content</span><span class="p">)</span> <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">all</span><span class="p">(</span><span class="n">j</span><span class="p">))</span>
</span><span id="create_json_string-150"><a href="#create_json_string-150"><span class="linenos">150</span></a> <span class="n">dummy_array</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">empty</span><span class="p">((</span><span class="n">my_corr</span><span class="o">.</span><span class="n">N</span><span class="p">,</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">N</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">object</span><span class="p">)</span>
</span><span id="create_json_string-151"><a href="#create_json_string-151"><span class="linenos">151</span></a> <span class="n">dummy_array</span><span class="p">[:]</span> <span class="o">=</span> <span class="n">_nan_Obs_like</span><span class="p">(</span><span class="n">my_corr</span><span class="o">.</span><span class="n">content</span><span class="p">[</span><span class="n">first_not_none</span><span class="p">]</span><span class="o">.</span><span class="n">ravel</span><span class="p">()[</span><span class="mi">0</span><span class="p">])</span>
</span><span id="create_json_string-152"><a href="#create_json_string-152"><span class="linenos">152</span></a> <span class="n">content</span> <span class="o">=</span> <span class="p">[</span><span class="n">o</span> <span class="k">if</span> <span class="n">o</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="k">else</span> <span class="n">dummy_array</span> <span class="k">for</span> <span class="n">o</span> <span class="ow">in</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">content</span><span class="p">]</span>
</span><span id="create_json_string-153"><a href="#create_json_string-153"><span class="linenos">153</span></a> <span class="n">dat</span> <span class="o">=</span> <span class="n">write_Array_to_dict</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">(</span><span class="n">content</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">object</span><span class="p">))</span>
</span><span id="create_json_string-154"><a href="#create_json_string-154"><span class="linenos">154</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'Corr'</span>
</span><span id="create_json_string-155"><a href="#create_json_string-155"><span class="linenos">155</span></a> <span class="n">corr_meta_data</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">my_corr</span><span class="o">.</span><span class="n">tag</span><span class="p">)</span>
</span><span id="create_json_string-156"><a href="#create_json_string-156"><span class="linenos">156</span></a> <span class="k">if</span> <span class="s1">'tag'</span> <span class="ow">in</span> <span class="n">dat</span><span class="o">.</span><span class="n">keys</span><span class="p">():</span>
</span><span id="create_json_string-157"><a href="#create_json_string-157"><span class="linenos">157</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">corr_meta_data</span><span class="p">)</span>
</span><span id="create_json_string-158"><a href="#create_json_string-158"><span class="linenos">158</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="create_json_string-159"><a href="#create_json_string-159"><span class="linenos">159</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="n">corr_meta_data</span><span class="p">]</span>
</span><span id="create_json_string-160"><a href="#create_json_string-160"><span class="linenos">160</span></a> <span class="n">taglist</span> <span class="o">=</span> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span>
</span><span id="create_json_string-161"><a href="#create_json_string-161"><span class="linenos">161</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="p">{}</span> <span class="c1"># tag is now a dictionary, that contains the previous taglist in the key "tag"</span>
</span><span id="create_json_string-162"><a href="#create_json_string-162"><span class="linenos">162</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">][</span><span class="s1">'tag'</span><span class="p">]</span> <span class="o">=</span> <span class="n">taglist</span>
</span><span id="create_json_string-163"><a href="#create_json_string-163"><span class="linenos">163</span></a> <span class="k">if</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">prange</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
</span><span id="create_json_string-164"><a href="#create_json_string-164"><span class="linenos">164</span></a> <span class="n">dat</span><span class="p">[</span><span class="s1">'tag'</span><span class="p">][</span><span class="s1">'prange'</span><span class="p">]</span> <span class="o">=</span> <span class="n">my_corr</span><span class="o">.</span><span class="n">prange</span>
</span><span id="create_json_string-165"><a href="#create_json_string-165"><span class="linenos">165</span></a> <span class="k">return</span> <span class="n">dat</span>
</span><span id="create_json_string-166"><a href="#create_json_string-166"><span class="linenos">166</span></a>
</span><span id="create_json_string-167"><a href="#create_json_string-167"><span class="linenos">167</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="create_json_string-168"><a href="#create_json_string-168"><span class="linenos">168</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="p">[</span><span class="n">ol</span><span class="p">]</span>
</span><span id="create_json_string-169"><a href="#create_json_string-169"><span class="linenos">169</span></a>
</span><span id="create_json_string-170"><a href="#create_json_string-170"><span class="linenos">170</span></a> <span class="n">d</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-171"><a href="#create_json_string-171"><span class="linenos">171</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'program'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'pyerrors </span><span class="si">%s</span><span class="s1">'</span> <span class="o">%</span> <span class="p">(</span><span class="n">pyerrorsversion</span><span class="o">.</span><span class="n">__version__</span><span class="p">)</span>
</span><span id="create_json_string-172"><a href="#create_json_string-172"><span class="linenos">172</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'version'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'1.1'</span>
</span><span id="create_json_string-173"><a href="#create_json_string-173"><span class="linenos">173</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'who'</span><span class="p">]</span> <span class="o">=</span> <span class="n">getpass</span><span class="o">.</span><span class="n">getuser</span><span class="p">()</span>
</span><span id="create_json_string-174"><a href="#create_json_string-174"><span class="linenos">174</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">datetime</span><span class="o">.</span><span class="n">now</span><span class="p">()</span><span class="o">.</span><span class="n">astimezone</span><span class="p">()</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y-%m-</span><span class="si">%d</span><span class="s1"> %H:%M:%S %z'</span><span class="p">)</span>
</span><span id="create_json_string-175"><a href="#create_json_string-175"><span class="linenos">175</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'host'</span><span class="p">]</span> <span class="o">=</span> <span class="n">socket</span><span class="o">.</span><span class="n">gethostname</span><span class="p">()</span> <span class="o">+</span> <span class="s1">', '</span> <span class="o">+</span> <span class="n">platform</span><span class="o">.</span><span class="n">platform</span><span class="p">()</span>
</span><span id="create_json_string-176"><a href="#create_json_string-176"><span class="linenos">176</span></a>
</span><span id="create_json_string-177"><a href="#create_json_string-177"><span class="linenos">177</span></a> <span class="k">if</span> <span class="n">description</span><span class="p">:</span>
</span><span id="create_json_string-178"><a href="#create_json_string-178"><span class="linenos">178</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'description'</span><span class="p">]</span> <span class="o">=</span> <span class="n">description</span>
</span><span id="create_json_string-179"><a href="#create_json_string-179"><span class="linenos">179</span></a>
</span><span id="create_json_string-180"><a href="#create_json_string-180"><span class="linenos">180</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
</span><span id="create_json_string-181"><a href="#create_json_string-181"><span class="linenos">181</span></a> <span class="k">for</span> <span class="n">io</span> <span class="ow">in</span> <span class="n">ol</span><span class="p">:</span>
</span><span id="create_json_string-182"><a href="#create_json_string-182"><span class="linenos">182</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="n">Obs</span><span class="p">):</span>
</span><span id="create_json_string-183"><a href="#create_json_string-183"><span class="linenos">183</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_Obs_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="create_json_string-184"><a href="#create_json_string-184"><span class="linenos">184</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
</span><span id="create_json_string-185"><a href="#create_json_string-185"><span class="linenos">185</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_List_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="create_json_string-186"><a href="#create_json_string-186"><span class="linenos">186</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
</span><span id="create_json_string-187"><a href="#create_json_string-187"><span class="linenos">187</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_Array_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="create_json_string-188"><a href="#create_json_string-188"><span class="linenos">188</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">io</span><span class="p">,</span> <span class="n">Corr</span><span class="p">):</span>
</span><span id="create_json_string-189"><a href="#create_json_string-189"><span class="linenos">189</span></a> <span class="n">d</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">write_Corr_to_dict</span><span class="p">(</span><span class="n">io</span><span class="p">))</span>
</span><span id="create_json_string-190"><a href="#create_json_string-190"><span class="linenos">190</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="create_json_string-191"><a href="#create_json_string-191"><span class="linenos">191</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Unkown datatype."</span><span class="p">)</span>
</span><span id="create_json_string-192"><a href="#create_json_string-192"><span class="linenos">192</span></a>
</span><span id="create_json_string-193"><a href="#create_json_string-193"><span class="linenos">193</span></a> <span class="k">def</span><span class="w"> </span><span class="nf">_jsonifier</span><span class="p">(</span><span class="n">obj</span><span class="p">):</span>
</span><span id="create_json_string-194"><a href="#create_json_string-194"><span class="linenos">194</span></a> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="create_json_string-195"><a href="#create_json_string-195"><span class="linenos">195</span></a> <span class="n">result</span> <span class="o">=</span> <span class="p">{}</span>
</span><span id="create_json_string-196"><a href="#create_json_string-196"><span class="linenos">196</span></a> <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">obj</span><span class="p">:</span>
</span><span id="create_json_string-197"><a href="#create_json_string-197"><span class="linenos">197</span></a> <span class="k">if</span> <span class="n">key</span> <span class="ow">is</span> <span class="kc">True</span><span class="p">:</span>
</span><span id="create_json_string-198"><a href="#create_json_string-198"><span class="linenos">198</span></a> <span class="n">result</span><span class="p">[</span><span class="s1">'true'</span><span class="p">]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="create_json_string-199"><a href="#create_json_string-199"><span class="linenos">199</span></a> <span class="k">elif</span> <span class="n">key</span> <span class="ow">is</span> <span class="kc">False</span><span class="p">:</span>
</span><span id="create_json_string-200"><a href="#create_json_string-200"><span class="linenos">200</span></a> <span class="n">result</span><span class="p">[</span><span class="s1">'false'</span><span class="p">]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="create_json_string-201"><a href="#create_json_string-201"><span class="linenos">201</span></a> <span class="k">elif</span> <span class="n">key</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
</span><span id="create_json_string-202"><a href="#create_json_string-202"><span class="linenos">202</span></a> <span class="n">result</span><span class="p">[</span><span class="s1">'null'</span><span class="p">]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="create_json_string-203"><a href="#create_json_string-203"><span class="linenos">203</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">key</span><span class="p">,</span> <span class="p">(</span><span class="nb">int</span><span class="p">,</span> <span class="nb">float</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">floating</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">integer</span><span class="p">)):</span>
</span><span id="create_json_string-204"><a href="#create_json_string-204"><span class="linenos">204</span></a> <span class="n">result</span><span class="p">[</span><span class="nb">str</span><span class="p">(</span><span class="n">key</span><span class="p">)]</span> <span class="o">=</span> <span class="n">obj</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
</span><span id="create_json_string-205"><a href="#create_json_string-205"><span class="linenos">205</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="create_json_string-206"><a href="#create_json_string-206"><span class="linenos">206</span></a> <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">'keys must be str, int, float, bool or None'</span><span class="p">)</span>
</span><span id="create_json_string-207"><a href="#create_json_string-207"><span class="linenos">207</span></a> <span class="k">return</span> <span class="n">result</span>
</span><span id="create_json_string-208"><a href="#create_json_string-208"><span class="linenos">208</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">integer</span><span class="p">):</span>
</span><span id="create_json_string-209"><a href="#create_json_string-209"><span class="linenos">209</span></a> <span class="k">return</span> <span class="nb">int</span><span class="p">(</span><span class="n">obj</span><span class="p">)</span>
</span><span id="create_json_string-210"><a href="#create_json_string-210"><span class="linenos">210</span></a> <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">obj</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">floating</span><span class="p">):</span>
</span><span id="create_json_string-211"><a href="#create_json_string-211"><span class="linenos">211</span></a> <span class="k">return</span> <span class="nb">float</span><span class="p">(</span><span class="n">obj</span><span class="p">)</span>
</span><span id="create_json_string-212"><a href="#create_json_string-212"><span class="linenos">212</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="create_json_string-213"><a href="#create_json_string-213"><span class="linenos">213</span></a> <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">'</span><span class="si">%r</span><span class="s1"> is not JSON serializable'</span> <span class="o">%</span> <span class="p">(</span><span class="n">obj</span><span class="p">,))</span>
</span><span id="create_json_string-214"><a href="#create_json_string-214"><span class="linenos">214</span></a>
</span><span id="create_json_string-215"><a href="#create_json_string-215"><span class="linenos">215</span></a> <span class="k">if</span> <span class="n">indent</span><span class="p">:</span>
</span><span id="create_json_string-216"><a href="#create_json_string-216"><span class="linenos">216</span></a> <span class="k">return</span> <span class="n">json</span><span class="o">.</span><span class="n">dumps</span><span class="p">(</span><span class="n">d</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="n">indent</span><span class="p">,</span> <span class="n">ensure_ascii</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="n">_jsonifier</span><span class="p">,</span> <span class="n">write_mode</span><span class="o">=</span><span class="n">json</span><span class="o">.</span><span class="n">WM_SINGLE_LINE_ARRAY</span><span class="p">)</span>
</span><span id="create_json_string-217"><a href="#create_json_string-217"><span class="linenos">217</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="create_json_string-218"><a href="#create_json_string-218"><span class="linenos">218</span></a> <span class="k">return</span> <span class="n">json</span><span class="o">.</span><span class="n">dumps</span><span class="p">(</span><span class="n">d</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="n">indent</span><span class="p">,</span> <span class="n">ensure_ascii</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="n">_jsonifier</span><span class="p">,</span> <span class="n">write_mode</span><span class="o">=</span><span class="n">json</span><span class="o">.</span><span class="n">WM_COMPACT</span><span class="p">)</span>
</span></pre></div>
<div class="docstring"><p>Generate the string for the export of a list of Obs or structures containing Obs
to a <a href="">pyerrors.input.json</a>(.gz) file</p>
<h6 id="parameters">Parameters</h6>
<ul>
<li><strong>ol</strong> (list):
List of objects that will be exported. At the moment, these objects can be
either of: Obs, list, numpy.ndarray, Corr.
All Obs inside a structure have to be defined on the same set of configurations.</li>
<li><strong>description</strong> (str):
Optional string that describes the contents of the json file.</li>
<li><strong>indent</strong> (int):
Specify the indentation level of the json file. None or 0 is permissible and
saves disk space.</li>
</ul>
<h6 id="returns">Returns</h6>
<ul>
<li><strong>json_string</strong> (str):
String for export to <a href="">pyerrors.input.json</a>(.gz) file</li>
</ul>
</div>
</section>
<section id="dump_to_json">
<input id="dump_to_json-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<div class="attr function">
<span class="def">def</span>
<span class="name">dump_to_json</span><span class="signature pdoc-code condensed">(<span class="param"><span class="n">ol</span>, </span><span class="param"><span class="n">fname</span>, </span><span class="param"><span class="n">description</span><span class="o">=</span><span class="s1">''</span>, </span><span class="param"><span class="n">indent</span><span class="o">=</span><span class="mi">1</span>, </span><span class="param"><span class="n">gz</span><span class="o">=</span><span class="kc">True</span></span><span class="return-annotation">):</span></span>
<label class="view-source-button" for="dump_to_json-view-source"><span>View Source</span></label>
</div>
<a class="headerlink" href="#dump_to_json"></a>
<div class="pdoc-code codehilite"><pre><span></span><span id="dump_to_json-221"><a href="#dump_to_json-221"><span class="linenos">221</span></a><span class="k">def</span><span class="w"> </span><span class="nf">dump_to_json</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="s1">''</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
</span><span id="dump_to_json-222"><a href="#dump_to_json-222"><span class="linenos">222</span></a><span class="w"> </span><span class="sd">"""Export a list of Obs or structures containing Obs to a .json(.gz) file.</span>
</span><span id="dump_to_json-223"><a href="#dump_to_json-223"><span class="linenos">223</span></a><span class="sd"> Dict keys that are not JSON-serializable such as floats are converted to strings.</span>
</span><span id="dump_to_json-224"><a href="#dump_to_json-224"><span class="linenos">224</span></a>
</span><span id="dump_to_json-225"><a href="#dump_to_json-225"><span class="linenos">225</span></a><span class="sd"> Parameters</span>
</span><span id="dump_to_json-226"><a href="#dump_to_json-226"><span class="linenos">226</span></a><span class="sd"> ----------</span>
</span><span id="dump_to_json-227"><a href="#dump_to_json-227"><span class="linenos">227</span></a><span class="sd"> ol : list</span>
</span><span id="dump_to_json-228"><a href="#dump_to_json-228"><span class="linenos">228</span></a><span class="sd"> List of objects that will be exported. At the moment, these objects can be</span>
</span><span id="dump_to_json-229"><a href="#dump_to_json-229"><span class="linenos">229</span></a><span class="sd"> either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="dump_to_json-230"><a href="#dump_to_json-230"><span class="linenos">230</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="dump_to_json-231"><a href="#dump_to_json-231"><span class="linenos">231</span></a><span class="sd"> fname : str</span>
</span><span id="dump_to_json-232"><a href="#dump_to_json-232"><span class="linenos">232</span></a><span class="sd"> Filename of the output file.</span>
</span><span id="dump_to_json-233"><a href="#dump_to_json-233"><span class="linenos">233</span></a><span class="sd"> description : str</span>
</span><span id="dump_to_json-234"><a href="#dump_to_json-234"><span class="linenos">234</span></a><span class="sd"> Optional string that describes the contents of the json file.</span>
</span><span id="dump_to_json-235"><a href="#dump_to_json-235"><span class="linenos">235</span></a><span class="sd"> indent : int</span>
</span><span id="dump_to_json-236"><a href="#dump_to_json-236"><span class="linenos">236</span></a><span class="sd"> Specify the indentation level of the json file. None or 0 is permissible and</span>
</span><span id="dump_to_json-237"><a href="#dump_to_json-237"><span class="linenos">237</span></a><span class="sd"> saves disk space.</span>
</span><span id="dump_to_json-238"><a href="#dump_to_json-238"><span class="linenos">238</span></a><span class="sd"> gz : bool</span>
</span><span id="dump_to_json-239"><a href="#dump_to_json-239"><span class="linenos">239</span></a><span class="sd"> If True, the output is a gzipped json. If False, the output is a json file.</span>
</span><span id="dump_to_json-240"><a href="#dump_to_json-240"><span class="linenos">240</span></a>
</span><span id="dump_to_json-241"><a href="#dump_to_json-241"><span class="linenos">241</span></a><span class="sd"> Returns</span>
</span><span id="dump_to_json-242"><a href="#dump_to_json-242"><span class="linenos">242</span></a><span class="sd"> -------</span>
</span><span id="dump_to_json-243"><a href="#dump_to_json-243"><span class="linenos">243</span></a><span class="sd"> Null</span>
</span><span id="dump_to_json-244"><a href="#dump_to_json-244"><span class="linenos">244</span></a><span class="sd"> """</span>
</span><span id="dump_to_json-245"><a href="#dump_to_json-245"><span class="linenos">245</span></a>
</span><span id="dump_to_json-246"><a href="#dump_to_json-246"><span class="linenos">246</span></a> <span class="n">jsonstring</span> <span class="o">=</span> <span class="n">create_json_string</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">description</span><span class="p">,</span> <span class="n">indent</span><span class="p">)</span>
</span><span id="dump_to_json-247"><a href="#dump_to_json-247"><span class="linenos">247</span></a>
</span><span id="dump_to_json-248"><a href="#dump_to_json-248"><span class="linenos">248</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.json'</span><span class="p">)</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="dump_to_json-249"><a href="#dump_to_json-249"><span class="linenos">249</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.json'</span>
</span><span id="dump_to_json-250"><a href="#dump_to_json-250"><span class="linenos">250</span></a>
</span><span id="dump_to_json-251"><a href="#dump_to_json-251"><span class="linenos">251</span></a> <span class="k">if</span> <span class="n">gz</span><span class="p">:</span>
</span><span id="dump_to_json-252"><a href="#dump_to_json-252"><span class="linenos">252</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="dump_to_json-253"><a href="#dump_to_json-253"><span class="linenos">253</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.gz'</span>
</span><span id="dump_to_json-254"><a href="#dump_to_json-254"><span class="linenos">254</span></a>
</span><span id="dump_to_json-255"><a href="#dump_to_json-255"><span class="linenos">255</span></a> <span class="n">fp</span> <span class="o">=</span> <span class="n">gzip</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'wb'</span><span class="p">)</span>
</span><span id="dump_to_json-256"><a href="#dump_to_json-256"><span class="linenos">256</span></a> <span class="n">fp</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">jsonstring</span><span class="o">.</span><span class="n">encode</span><span class="p">(</span><span class="s1">'utf-8'</span><span class="p">))</span>
</span><span id="dump_to_json-257"><a href="#dump_to_json-257"><span class="linenos">257</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="dump_to_json-258"><a href="#dump_to_json-258"><span class="linenos">258</span></a> <span class="n">fp</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s1">'utf-8'</span><span class="p">)</span>
</span><span id="dump_to_json-259"><a href="#dump_to_json-259"><span class="linenos">259</span></a> <span class="n">fp</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">jsonstring</span><span class="p">)</span>
</span><span id="dump_to_json-260"><a href="#dump_to_json-260"><span class="linenos">260</span></a> <span class="n">fp</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
</span></pre></div>
<div class="docstring"><p>Export a list of Obs or structures containing Obs to a <a href="">pyerrors.input.json</a>(.gz) file.
Dict keys that are not JSON-serializable such as floats are converted to strings.</p>
<h6 id="parameters">Parameters</h6>
<ul>
<li><strong>ol</strong> (list):
List of objects that will be exported. At the moment, these objects can be
either of: Obs, list, numpy.ndarray, Corr.
All Obs inside a structure have to be defined on the same set of configurations.</li>
<li><strong>fname</strong> (str):
Filename of the output file.</li>
<li><strong>description</strong> (str):
Optional string that describes the contents of the json file.</li>
<li><strong>indent</strong> (int):
Specify the indentation level of the json file. None or 0 is permissible and
saves disk space.</li>
<li><strong>gz</strong> (bool):
If True, the output is a gzipped json. If False, the output is a json file.</li>
</ul>
<h6 id="returns">Returns</h6>
<ul>
<li><strong>Null</strong></li>
</ul>
</div>
</section>
<section id="import_json_string">
<input id="import_json_string-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<div class="attr function">
<span class="def">def</span>
<span class="name">import_json_string</span><span class="signature pdoc-code condensed">(<span class="param"><span class="n">json_string</span>, </span><span class="param"><span class="n">verbose</span><span class="o">=</span><span class="kc">True</span>, </span><span class="param"><span class="n">full_output</span><span class="o">=</span><span class="kc">False</span></span><span class="return-annotation">):</span></span>
<label class="view-source-button" for="import_json_string-view-source"><span>View Source</span></label>
</div>
<a class="headerlink" href="#import_json_string"></a>
<div class="pdoc-code codehilite"><pre><span></span><span id="import_json_string-478"><a href="#import_json_string-478"><span class="linenos">478</span></a><span class="k">def</span><span class="w"> </span><span class="nf">import_json_string</span><span class="p">(</span><span class="n">json_string</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
</span><span id="import_json_string-479"><a href="#import_json_string-479"><span class="linenos">479</span></a><span class="w"> </span><span class="sd">"""Reconstruct a list of Obs or structures containing Obs from a json string.</span>
</span><span id="import_json_string-480"><a href="#import_json_string-480"><span class="linenos">480</span></a>
</span><span id="import_json_string-481"><a href="#import_json_string-481"><span class="linenos">481</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="import_json_string-482"><a href="#import_json_string-482"><span class="linenos">482</span></a><span class="sd"> If the list contains only one element, it is unpacked from the list.</span>
</span><span id="import_json_string-483"><a href="#import_json_string-483"><span class="linenos">483</span></a>
</span><span id="import_json_string-484"><a href="#import_json_string-484"><span class="linenos">484</span></a><span class="sd"> Parameters</span>
</span><span id="import_json_string-485"><a href="#import_json_string-485"><span class="linenos">485</span></a><span class="sd"> ----------</span>
</span><span id="import_json_string-486"><a href="#import_json_string-486"><span class="linenos">486</span></a><span class="sd"> json_string : str</span>
</span><span id="import_json_string-487"><a href="#import_json_string-487"><span class="linenos">487</span></a><span class="sd"> json string containing the data.</span>
</span><span id="import_json_string-488"><a href="#import_json_string-488"><span class="linenos">488</span></a><span class="sd"> verbose : bool</span>
</span><span id="import_json_string-489"><a href="#import_json_string-489"><span class="linenos">489</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="import_json_string-490"><a href="#import_json_string-490"><span class="linenos">490</span></a><span class="sd"> full_output : bool</span>
</span><span id="import_json_string-491"><a href="#import_json_string-491"><span class="linenos">491</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="import_json_string-492"><a href="#import_json_string-492"><span class="linenos">492</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="import_json_string-493"><a href="#import_json_string-493"><span class="linenos">493</span></a>
</span><span id="import_json_string-494"><a href="#import_json_string-494"><span class="linenos">494</span></a><span class="sd"> Returns</span>
</span><span id="import_json_string-495"><a href="#import_json_string-495"><span class="linenos">495</span></a><span class="sd"> -------</span>
</span><span id="import_json_string-496"><a href="#import_json_string-496"><span class="linenos">496</span></a><span class="sd"> result : list[Obs]</span>
</span><span id="import_json_string-497"><a href="#import_json_string-497"><span class="linenos">497</span></a><span class="sd"> reconstructed list of observables from the json string</span>
</span><span id="import_json_string-498"><a href="#import_json_string-498"><span class="linenos">498</span></a><span class="sd"> or</span>
</span><span id="import_json_string-499"><a href="#import_json_string-499"><span class="linenos">499</span></a><span class="sd"> result : Obs</span>
</span><span id="import_json_string-500"><a href="#import_json_string-500"><span class="linenos">500</span></a><span class="sd"> only one observable if the list only has one entry</span>
</span><span id="import_json_string-501"><a href="#import_json_string-501"><span class="linenos">501</span></a><span class="sd"> or</span>
</span><span id="import_json_string-502"><a href="#import_json_string-502"><span class="linenos">502</span></a><span class="sd"> result : dict</span>
</span><span id="import_json_string-503"><a href="#import_json_string-503"><span class="linenos">503</span></a><span class="sd"> if full_output=True</span>
</span><span id="import_json_string-504"><a href="#import_json_string-504"><span class="linenos">504</span></a><span class="sd"> """</span>
</span><span id="import_json_string-505"><a href="#import_json_string-505"><span class="linenos">505</span></a> <span class="k">return</span> <span class="n">_parse_json_dict</span><span class="p">(</span><span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">json_string</span><span class="p">),</span> <span class="n">verbose</span><span class="p">,</span> <span class="n">full_output</span><span class="p">)</span>
</span></pre></div>
<div class="docstring"><p>Reconstruct a list of Obs or structures containing Obs from a json string.</p>
<p>The following structures are supported: Obs, list, numpy.ndarray, Corr
If the list contains only one element, it is unpacked from the list.</p>
<h6 id="parameters">Parameters</h6>
<ul>
<li><strong>json_string</strong> (str):
json string containing the data.</li>
<li><strong>verbose</strong> (bool):
Print additional information that was written to the file.</li>
<li><strong>full_output</strong> (bool):
If True, a dict containing auxiliary information and the data is returned.
If False, only the data is returned.</li>
</ul>
<h6 id="returns">Returns</h6>
<ul>
<li><strong>result</strong> (list[Obs]):
reconstructed list of observables from the json string</li>
<li><strong>or</strong></li>
<li><strong>result</strong> (Obs):
only one observable if the list only has one entry</li>
<li><strong>or</strong></li>
<li><strong>result</strong> (dict):
if full_output=True</li>
</ul>
</div>
</section>
<section id="load_json">
<input id="load_json-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<div class="attr function">
<span class="def">def</span>
<span class="name">load_json</span><span class="signature pdoc-code condensed">(<span class="param"><span class="n">fname</span>, </span><span class="param"><span class="n">verbose</span><span class="o">=</span><span class="kc">True</span>, </span><span class="param"><span class="n">gz</span><span class="o">=</span><span class="kc">True</span>, </span><span class="param"><span class="n">full_output</span><span class="o">=</span><span class="kc">False</span></span><span class="return-annotation">):</span></span>
<label class="view-source-button" for="load_json-view-source"><span>View Source</span></label>
</div>
<a class="headerlink" href="#load_json"></a>
<div class="pdoc-code codehilite"><pre><span></span><span id="load_json-508"><a href="#load_json-508"><span class="linenos">508</span></a><span class="k">def</span><span class="w"> </span><span class="nf">load_json</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
</span><span id="load_json-509"><a href="#load_json-509"><span class="linenos">509</span></a><span class="w"> </span><span class="sd">"""Import a list of Obs or structures containing Obs from a .json(.gz) file.</span>
</span><span id="load_json-510"><a href="#load_json-510"><span class="linenos">510</span></a>
</span><span id="load_json-511"><a href="#load_json-511"><span class="linenos">511</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="load_json-512"><a href="#load_json-512"><span class="linenos">512</span></a><span class="sd"> If the list contains only one element, it is unpacked from the list.</span>
</span><span id="load_json-513"><a href="#load_json-513"><span class="linenos">513</span></a>
</span><span id="load_json-514"><a href="#load_json-514"><span class="linenos">514</span></a><span class="sd"> Parameters</span>
</span><span id="load_json-515"><a href="#load_json-515"><span class="linenos">515</span></a><span class="sd"> ----------</span>
</span><span id="load_json-516"><a href="#load_json-516"><span class="linenos">516</span></a><span class="sd"> fname : str</span>
</span><span id="load_json-517"><a href="#load_json-517"><span class="linenos">517</span></a><span class="sd"> Filename of the input file.</span>
</span><span id="load_json-518"><a href="#load_json-518"><span class="linenos">518</span></a><span class="sd"> verbose : bool</span>
</span><span id="load_json-519"><a href="#load_json-519"><span class="linenos">519</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="load_json-520"><a href="#load_json-520"><span class="linenos">520</span></a><span class="sd"> gz : bool</span>
</span><span id="load_json-521"><a href="#load_json-521"><span class="linenos">521</span></a><span class="sd"> If True, assumes that data is gzipped. If False, assumes JSON file.</span>
</span><span id="load_json-522"><a href="#load_json-522"><span class="linenos">522</span></a><span class="sd"> full_output : bool</span>
</span><span id="load_json-523"><a href="#load_json-523"><span class="linenos">523</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="load_json-524"><a href="#load_json-524"><span class="linenos">524</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="load_json-525"><a href="#load_json-525"><span class="linenos">525</span></a>
</span><span id="load_json-526"><a href="#load_json-526"><span class="linenos">526</span></a><span class="sd"> Returns</span>
</span><span id="load_json-527"><a href="#load_json-527"><span class="linenos">527</span></a><span class="sd"> -------</span>
</span><span id="load_json-528"><a href="#load_json-528"><span class="linenos">528</span></a><span class="sd"> result : list[Obs]</span>
</span><span id="load_json-529"><a href="#load_json-529"><span class="linenos">529</span></a><span class="sd"> reconstructed list of observables from the json string</span>
</span><span id="load_json-530"><a href="#load_json-530"><span class="linenos">530</span></a><span class="sd"> or</span>
</span><span id="load_json-531"><a href="#load_json-531"><span class="linenos">531</span></a><span class="sd"> result : Obs</span>
</span><span id="load_json-532"><a href="#load_json-532"><span class="linenos">532</span></a><span class="sd"> only one observable if the list only has one entry</span>
</span><span id="load_json-533"><a href="#load_json-533"><span class="linenos">533</span></a><span class="sd"> or</span>
</span><span id="load_json-534"><a href="#load_json-534"><span class="linenos">534</span></a><span class="sd"> result : dict</span>
</span><span id="load_json-535"><a href="#load_json-535"><span class="linenos">535</span></a><span class="sd"> if full_output=True</span>
</span><span id="load_json-536"><a href="#load_json-536"><span class="linenos">536</span></a><span class="sd"> """</span>
</span><span id="load_json-537"><a href="#load_json-537"><span class="linenos">537</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.json'</span><span class="p">)</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="load_json-538"><a href="#load_json-538"><span class="linenos">538</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.json'</span>
</span><span id="load_json-539"><a href="#load_json-539"><span class="linenos">539</span></a> <span class="k">if</span> <span class="n">gz</span><span class="p">:</span>
</span><span id="load_json-540"><a href="#load_json-540"><span class="linenos">540</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="load_json-541"><a href="#load_json-541"><span class="linenos">541</span></a> <span class="n">fname</span> <span class="o">+=</span> <span class="s1">'.gz'</span>
</span><span id="load_json-542"><a href="#load_json-542"><span class="linenos">542</span></a> <span class="k">with</span> <span class="n">gzip</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">)</span> <span class="k">as</span> <span class="n">fin</span><span class="p">:</span>
</span><span id="load_json-543"><a href="#load_json-543"><span class="linenos">543</span></a> <span class="n">d</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">fin</span><span class="p">)</span>
</span><span id="load_json-544"><a href="#load_json-544"><span class="linenos">544</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="load_json-545"><a href="#load_json-545"><span class="linenos">545</span></a> <span class="k">if</span> <span class="n">fname</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s1">'.gz'</span><span class="p">):</span>
</span><span id="load_json-546"><a href="#load_json-546"><span class="linenos">546</span></a> <span class="n">warnings</span><span class="o">.</span><span class="n">warn</span><span class="p">(</span><span class="s2">"Trying to read from </span><span class="si">%s</span><span class="s2"> without unzipping!"</span> <span class="o">%</span> <span class="n">fname</span><span class="p">,</span> <span class="ne">UserWarning</span><span class="p">)</span>
</span><span id="load_json-547"><a href="#load_json-547"><span class="linenos">547</span></a> <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s1">'utf-8'</span><span class="p">)</span> <span class="k">as</span> <span class="n">fin</span><span class="p">:</span>
</span><span id="load_json-548"><a href="#load_json-548"><span class="linenos">548</span></a> <span class="n">d</span> <span class="o">=</span> <span class="n">json</span><span class="o">.</span><span class="n">loads</span><span class="p">(</span><span class="n">fin</span><span class="o">.</span><span class="n">read</span><span class="p">())</span>
</span><span id="load_json-549"><a href="#load_json-549"><span class="linenos">549</span></a>
</span><span id="load_json-550"><a href="#load_json-550"><span class="linenos">550</span></a> <span class="k">return</span> <span class="n">_parse_json_dict</span><span class="p">(</span><span class="n">d</span><span class="p">,</span> <span class="n">verbose</span><span class="p">,</span> <span class="n">full_output</span><span class="p">)</span>
</span></pre></div>
<div class="docstring"><p>Import a list of Obs or structures containing Obs from a <a href="">pyerrors.input.json</a>(.gz) file.</p>
<p>The following structures are supported: Obs, list, numpy.ndarray, Corr
If the list contains only one element, it is unpacked from the list.</p>
<h6 id="parameters">Parameters</h6>
<ul>
<li><strong>fname</strong> (str):
Filename of the input file.</li>
<li><strong>verbose</strong> (bool):
Print additional information that was written to the file.</li>
<li><strong>gz</strong> (bool):
If True, assumes that data is gzipped. If False, assumes JSON file.</li>
<li><strong>full_output</strong> (bool):
If True, a dict containing auxiliary information and the data is returned.
If False, only the data is returned.</li>
</ul>
<h6 id="returns">Returns</h6>
<ul>
<li><strong>result</strong> (list[Obs]):
reconstructed list of observables from the json string</li>
<li><strong>or</strong></li>
<li><strong>result</strong> (Obs):
only one observable if the list only has one entry</li>
<li><strong>or</strong></li>
<li><strong>result</strong> (dict):
if full_output=True</li>
</ul>
</div>
</section>
<section id="dump_dict_to_json">
<input id="dump_dict_to_json-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<div class="attr function">
<span class="def">def</span>
<span class="name">dump_dict_to_json</span><span class="signature pdoc-code condensed">(<span class="param"><span class="n">od</span>, </span><span class="param"><span class="n">fname</span>, </span><span class="param"><span class="n">description</span><span class="o">=</span><span class="s1">''</span>, </span><span class="param"><span class="n">indent</span><span class="o">=</span><span class="mi">1</span>, </span><span class="param"><span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span>, </span><span class="param"><span class="n">gz</span><span class="o">=</span><span class="kc">True</span></span><span class="return-annotation">):</span></span>
<label class="view-source-button" for="dump_dict_to_json-view-source"><span>View Source</span></label>
</div>
<a class="headerlink" href="#dump_dict_to_json"></a>
<div class="pdoc-code codehilite"><pre><span></span><span id="dump_dict_to_json-633"><a href="#dump_dict_to_json-633"><span class="linenos">633</span></a><span class="k">def</span><span class="w"> </span><span class="nf">dump_dict_to_json</span><span class="p">(</span><span class="n">od</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="s1">''</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
</span><span id="dump_dict_to_json-634"><a href="#dump_dict_to_json-634"><span class="linenos">634</span></a><span class="w"> </span><span class="sd">"""Export a dict of Obs or structures containing Obs to a .json(.gz) file</span>
</span><span id="dump_dict_to_json-635"><a href="#dump_dict_to_json-635"><span class="linenos">635</span></a>
</span><span id="dump_dict_to_json-636"><a href="#dump_dict_to_json-636"><span class="linenos">636</span></a><span class="sd"> Parameters</span>
</span><span id="dump_dict_to_json-637"><a href="#dump_dict_to_json-637"><span class="linenos">637</span></a><span class="sd"> ----------</span>
</span><span id="dump_dict_to_json-638"><a href="#dump_dict_to_json-638"><span class="linenos">638</span></a><span class="sd"> od : dict</span>
</span><span id="dump_dict_to_json-639"><a href="#dump_dict_to_json-639"><span class="linenos">639</span></a><span class="sd"> Dict of JSON valid structures and objects that will be exported.</span>
</span><span id="dump_dict_to_json-640"><a href="#dump_dict_to_json-640"><span class="linenos">640</span></a><span class="sd"> At the moment, these objects can be either of: Obs, list, numpy.ndarray, Corr.</span>
</span><span id="dump_dict_to_json-641"><a href="#dump_dict_to_json-641"><span class="linenos">641</span></a><span class="sd"> All Obs inside a structure have to be defined on the same set of configurations.</span>
</span><span id="dump_dict_to_json-642"><a href="#dump_dict_to_json-642"><span class="linenos">642</span></a><span class="sd"> fname : str</span>
</span><span id="dump_dict_to_json-643"><a href="#dump_dict_to_json-643"><span class="linenos">643</span></a><span class="sd"> Filename of the output file.</span>
</span><span id="dump_dict_to_json-644"><a href="#dump_dict_to_json-644"><span class="linenos">644</span></a><span class="sd"> description : str</span>
</span><span id="dump_dict_to_json-645"><a href="#dump_dict_to_json-645"><span class="linenos">645</span></a><span class="sd"> Optional string that describes the contents of the json file.</span>
</span><span id="dump_dict_to_json-646"><a href="#dump_dict_to_json-646"><span class="linenos">646</span></a><span class="sd"> indent : int</span>
</span><span id="dump_dict_to_json-647"><a href="#dump_dict_to_json-647"><span class="linenos">647</span></a><span class="sd"> Specify the indentation level of the json file. None or 0 is permissible and</span>
</span><span id="dump_dict_to_json-648"><a href="#dump_dict_to_json-648"><span class="linenos">648</span></a><span class="sd"> saves disk space.</span>
</span><span id="dump_dict_to_json-649"><a href="#dump_dict_to_json-649"><span class="linenos">649</span></a><span class="sd"> reps : str</span>
</span><span id="dump_dict_to_json-650"><a href="#dump_dict_to_json-650"><span class="linenos">650</span></a><span class="sd"> Specify the structure of the placeholder in exported dict to be reps[0-9]+.</span>
</span><span id="dump_dict_to_json-651"><a href="#dump_dict_to_json-651"><span class="linenos">651</span></a><span class="sd"> gz : bool</span>
</span><span id="dump_dict_to_json-652"><a href="#dump_dict_to_json-652"><span class="linenos">652</span></a><span class="sd"> If True, the output is a gzipped json. If False, the output is a json file.</span>
</span><span id="dump_dict_to_json-653"><a href="#dump_dict_to_json-653"><span class="linenos">653</span></a>
</span><span id="dump_dict_to_json-654"><a href="#dump_dict_to_json-654"><span class="linenos">654</span></a><span class="sd"> Returns</span>
</span><span id="dump_dict_to_json-655"><a href="#dump_dict_to_json-655"><span class="linenos">655</span></a><span class="sd"> -------</span>
</span><span id="dump_dict_to_json-656"><a href="#dump_dict_to_json-656"><span class="linenos">656</span></a><span class="sd"> None</span>
</span><span id="dump_dict_to_json-657"><a href="#dump_dict_to_json-657"><span class="linenos">657</span></a><span class="sd"> """</span>
</span><span id="dump_dict_to_json-658"><a href="#dump_dict_to_json-658"><span class="linenos">658</span></a>
</span><span id="dump_dict_to_json-659"><a href="#dump_dict_to_json-659"><span class="linenos">659</span></a> <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">od</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
</span><span id="dump_dict_to_json-660"><a href="#dump_dict_to_json-660"><span class="linenos">660</span></a> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'od has to be a dictionary. Did you want to use dump_to_json?'</span><span class="p">)</span>
</span><span id="dump_dict_to_json-661"><a href="#dump_dict_to_json-661"><span class="linenos">661</span></a>
</span><span id="dump_dict_to_json-662"><a href="#dump_dict_to_json-662"><span class="linenos">662</span></a> <span class="n">infostring</span> <span class="o">=</span> <span class="p">(</span><span class="s1">'This JSON file contains a python dictionary that has been parsed to a list of structures. '</span>
</span><span id="dump_dict_to_json-663"><a href="#dump_dict_to_json-663"><span class="linenos">663</span></a> <span class="s1">'OBSDICT contains the dictionary, where Obs or other structures have been replaced by '</span>
</span><span id="dump_dict_to_json-664"><a href="#dump_dict_to_json-664"><span class="linenos">664</span></a> <span class="s1">''</span> <span class="o">+</span> <span class="n">reps</span> <span class="o">+</span> <span class="s1">'[0-9]+. The field description contains the additional description of this JSON file. '</span>
</span><span id="dump_dict_to_json-665"><a href="#dump_dict_to_json-665"><span class="linenos">665</span></a> <span class="s1">'This file may be parsed to a dict with the pyerrors routine load_json_dict.'</span><span class="p">)</span>
</span><span id="dump_dict_to_json-666"><a href="#dump_dict_to_json-666"><span class="linenos">666</span></a>
</span><span id="dump_dict_to_json-667"><a href="#dump_dict_to_json-667"><span class="linenos">667</span></a> <span class="n">desc_dict</span> <span class="o">=</span> <span class="p">{</span><span class="s1">'INFO'</span><span class="p">:</span> <span class="n">infostring</span><span class="p">,</span> <span class="s1">'OBSDICT'</span><span class="p">:</span> <span class="p">{},</span> <span class="s1">'description'</span><span class="p">:</span> <span class="n">description</span><span class="p">}</span>
</span><span id="dump_dict_to_json-668"><a href="#dump_dict_to_json-668"><span class="linenos">668</span></a> <span class="n">ol</span><span class="p">,</span> <span class="n">desc_dict</span><span class="p">[</span><span class="s1">'OBSDICT'</span><span class="p">]</span> <span class="o">=</span> <span class="n">_ol_from_dict</span><span class="p">(</span><span class="n">od</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="n">reps</span><span class="p">)</span>
</span><span id="dump_dict_to_json-669"><a href="#dump_dict_to_json-669"><span class="linenos">669</span></a>
</span><span id="dump_dict_to_json-670"><a href="#dump_dict_to_json-670"><span class="linenos">670</span></a> <span class="n">dump_to_json</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">description</span><span class="o">=</span><span class="n">desc_dict</span><span class="p">,</span> <span class="n">indent</span><span class="o">=</span><span class="n">indent</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="n">gz</span><span class="p">)</span>
</span></pre></div>
<div class="docstring"><p>Export a dict of Obs or structures containing Obs to a <a href="">pyerrors.input.json</a>(.gz) file</p>
<h6 id="parameters">Parameters</h6>
<ul>
<li><strong>od</strong> (dict):
Dict of JSON valid structures and objects that will be exported.
At the moment, these objects can be either of: Obs, list, numpy.ndarray, Corr.
All Obs inside a structure have to be defined on the same set of configurations.</li>
<li><strong>fname</strong> (str):
Filename of the output file.</li>
<li><strong>description</strong> (str):
Optional string that describes the contents of the json file.</li>
<li><strong>indent</strong> (int):
Specify the indentation level of the json file. None or 0 is permissible and
saves disk space.</li>
<li><strong>reps</strong> (str):
Specify the structure of the placeholder in exported dict to be reps[0-9]+.</li>
<li><strong>gz</strong> (bool):
If True, the output is a gzipped json. If False, the output is a json file.</li>
</ul>
<h6 id="returns">Returns</h6>
<ul>
<li><strong>None</strong></li>
</ul>
</div>
</section>
<section id="load_json_dict">
<input id="load_json_dict-view-source" class="view-source-toggle-state" type="checkbox" aria-hidden="true" tabindex="-1">
<div class="attr function">
<span class="def">def</span>
<span class="name">load_json_dict</span><span class="signature pdoc-code condensed">(<span class="param"><span class="n">fname</span>, </span><span class="param"><span class="n">verbose</span><span class="o">=</span><span class="kc">True</span>, </span><span class="param"><span class="n">gz</span><span class="o">=</span><span class="kc">True</span>, </span><span class="param"><span class="n">full_output</span><span class="o">=</span><span class="kc">False</span>, </span><span class="param"><span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span></span><span class="return-annotation">):</span></span>
<label class="view-source-button" for="load_json_dict-view-source"><span>View Source</span></label>
</div>
<a class="headerlink" href="#load_json_dict"></a>
<div class="pdoc-code codehilite"><pre><span></span><span id="load_json_dict-736"><a href="#load_json_dict-736"><span class="linenos">736</span></a><span class="k">def</span><span class="w"> </span><span class="nf">load_json_dict</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="s1">'DICTOBS'</span><span class="p">):</span>
</span><span id="load_json_dict-737"><a href="#load_json_dict-737"><span class="linenos">737</span></a><span class="w"> </span><span class="sd">"""Import a dict of Obs or structures containing Obs from a .json(.gz) file.</span>
</span><span id="load_json_dict-738"><a href="#load_json_dict-738"><span class="linenos">738</span></a>
</span><span id="load_json_dict-739"><a href="#load_json_dict-739"><span class="linenos">739</span></a><span class="sd"> The following structures are supported: Obs, list, numpy.ndarray, Corr</span>
</span><span id="load_json_dict-740"><a href="#load_json_dict-740"><span class="linenos">740</span></a>
</span><span id="load_json_dict-741"><a href="#load_json_dict-741"><span class="linenos">741</span></a><span class="sd"> Parameters</span>
</span><span id="load_json_dict-742"><a href="#load_json_dict-742"><span class="linenos">742</span></a><span class="sd"> ----------</span>
</span><span id="load_json_dict-743"><a href="#load_json_dict-743"><span class="linenos">743</span></a><span class="sd"> fname : str</span>
</span><span id="load_json_dict-744"><a href="#load_json_dict-744"><span class="linenos">744</span></a><span class="sd"> Filename of the input file.</span>
</span><span id="load_json_dict-745"><a href="#load_json_dict-745"><span class="linenos">745</span></a><span class="sd"> verbose : bool</span>
</span><span id="load_json_dict-746"><a href="#load_json_dict-746"><span class="linenos">746</span></a><span class="sd"> Print additional information that was written to the file.</span>
</span><span id="load_json_dict-747"><a href="#load_json_dict-747"><span class="linenos">747</span></a><span class="sd"> gz : bool</span>
</span><span id="load_json_dict-748"><a href="#load_json_dict-748"><span class="linenos">748</span></a><span class="sd"> If True, assumes that data is gzipped. If False, assumes JSON file.</span>
</span><span id="load_json_dict-749"><a href="#load_json_dict-749"><span class="linenos">749</span></a><span class="sd"> full_output : bool</span>
</span><span id="load_json_dict-750"><a href="#load_json_dict-750"><span class="linenos">750</span></a><span class="sd"> If True, a dict containing auxiliary information and the data is returned.</span>
</span><span id="load_json_dict-751"><a href="#load_json_dict-751"><span class="linenos">751</span></a><span class="sd"> If False, only the data is returned.</span>
</span><span id="load_json_dict-752"><a href="#load_json_dict-752"><span class="linenos">752</span></a><span class="sd"> reps : str</span>
</span><span id="load_json_dict-753"><a href="#load_json_dict-753"><span class="linenos">753</span></a><span class="sd"> Specify the structure of the placeholder in imported dict to be reps[0-9]+.</span>
</span><span id="load_json_dict-754"><a href="#load_json_dict-754"><span class="linenos">754</span></a>
</span><span id="load_json_dict-755"><a href="#load_json_dict-755"><span class="linenos">755</span></a><span class="sd"> Returns</span>
</span><span id="load_json_dict-756"><a href="#load_json_dict-756"><span class="linenos">756</span></a><span class="sd"> -------</span>
</span><span id="load_json_dict-757"><a href="#load_json_dict-757"><span class="linenos">757</span></a><span class="sd"> data : Obs / list / Corr</span>
</span><span id="load_json_dict-758"><a href="#load_json_dict-758"><span class="linenos">758</span></a><span class="sd"> Read data</span>
</span><span id="load_json_dict-759"><a href="#load_json_dict-759"><span class="linenos">759</span></a><span class="sd"> or</span>
</span><span id="load_json_dict-760"><a href="#load_json_dict-760"><span class="linenos">760</span></a><span class="sd"> data : dict</span>
</span><span id="load_json_dict-761"><a href="#load_json_dict-761"><span class="linenos">761</span></a><span class="sd"> Read data and meta-data</span>
</span><span id="load_json_dict-762"><a href="#load_json_dict-762"><span class="linenos">762</span></a><span class="sd"> """</span>
</span><span id="load_json_dict-763"><a href="#load_json_dict-763"><span class="linenos">763</span></a> <span class="n">indata</span> <span class="o">=</span> <span class="n">load_json</span><span class="p">(</span><span class="n">fname</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="n">verbose</span><span class="p">,</span> <span class="n">gz</span><span class="o">=</span><span class="n">gz</span><span class="p">,</span> <span class="n">full_output</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
</span><span id="load_json_dict-764"><a href="#load_json_dict-764"><span class="linenos">764</span></a> <span class="n">description</span> <span class="o">=</span> <span class="n">indata</span><span class="p">[</span><span class="s1">'description'</span><span class="p">][</span><span class="s1">'description'</span><span class="p">]</span>
</span><span id="load_json_dict-765"><a href="#load_json_dict-765"><span class="linenos">765</span></a> <span class="n">indict</span> <span class="o">=</span> <span class="n">indata</span><span class="p">[</span><span class="s1">'description'</span><span class="p">][</span><span class="s1">'OBSDICT'</span><span class="p">]</span>
</span><span id="load_json_dict-766"><a href="#load_json_dict-766"><span class="linenos">766</span></a> <span class="n">ol</span> <span class="o">=</span> <span class="n">indata</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span>
</span><span id="load_json_dict-767"><a href="#load_json_dict-767"><span class="linenos">767</span></a> <span class="n">od</span> <span class="o">=</span> <span class="n">_od_from_list_and_dict</span><span class="p">(</span><span class="n">ol</span><span class="p">,</span> <span class="n">indict</span><span class="p">,</span> <span class="n">reps</span><span class="o">=</span><span class="n">reps</span><span class="p">)</span>
</span><span id="load_json_dict-768"><a href="#load_json_dict-768"><span class="linenos">768</span></a>
</span><span id="load_json_dict-769"><a href="#load_json_dict-769"><span class="linenos">769</span></a> <span class="k">if</span> <span class="n">full_output</span><span class="p">:</span>
</span><span id="load_json_dict-770"><a href="#load_json_dict-770"><span class="linenos">770</span></a> <span class="n">indata</span><span class="p">[</span><span class="s1">'description'</span><span class="p">]</span> <span class="o">=</span> <span class="n">description</span>
</span><span id="load_json_dict-771"><a href="#load_json_dict-771"><span class="linenos">771</span></a> <span class="n">indata</span><span class="p">[</span><span class="s1">'obsdata'</span><span class="p">]</span> <span class="o">=</span> <span class="n">od</span>
</span><span id="load_json_dict-772"><a href="#load_json_dict-772"><span class="linenos">772</span></a> <span class="k">return</span> <span class="n">indata</span>
</span><span id="load_json_dict-773"><a href="#load_json_dict-773"><span class="linenos">773</span></a> <span class="k">else</span><span class="p">:</span>
</span><span id="load_json_dict-774"><a href="#load_json_dict-774"><span class="linenos">774</span></a> <span class="k">return</span> <span class="n">od</span>
</span></pre></div>
<div class="docstring"><p>Import a dict of Obs or structures containing Obs from a <a href="">pyerrors.input.json</a>(.gz) file.</p>
<p>The following structures are supported: Obs, list, numpy.ndarray, Corr</p>
<h6 id="parameters">Parameters</h6>
<ul>
<li><strong>fname</strong> (str):
Filename of the input file.</li>
<li><strong>verbose</strong> (bool):
Print additional information that was written to the file.</li>
<li><strong>gz</strong> (bool):
If True, assumes that data is gzipped. If False, assumes JSON file.</li>
<li><strong>full_output</strong> (bool):
If True, a dict containing auxiliary information and the data is returned.
If False, only the data is returned.</li>
<li><strong>reps</strong> (str):
Specify the structure of the placeholder in imported dict to be reps[0-9]+.</li>
</ul>
<h6 id="returns">Returns</h6>
<ul>
<li><strong>data</strong> (Obs / list / Corr):
Read data</li>
<li><strong>or</strong></li>
<li><strong>data</strong> (dict):
Read data and meta-data</li>
</ul>
</div>
</section>
</main>
<script>
function escapeHTML(html) {
return document.createElement('div').appendChild(document.createTextNode(html)).parentNode.innerHTML;
}
const originalContent = document.querySelector("main.pdoc");
let currentContent = originalContent;
function setContent(innerHTML) {
let elem;
if (innerHTML) {
elem = document.createElement("main");
elem.classList.add("pdoc");
elem.innerHTML = innerHTML;
} else {
elem = originalContent;
}
if (currentContent !== elem) {
currentContent.replaceWith(elem);
currentContent = elem;
}
}
function getSearchTerm() {
return (new URL(window.location)).searchParams.get("search");
}
const searchBox = document.querySelector(".pdoc input[type=search]");
searchBox.addEventListener("input", function () {
let url = new URL(window.location);
if (searchBox.value.trim()) {
url.hash = "";
url.searchParams.set("search", searchBox.value);
} else {
url.searchParams.delete("search");
}
history.replaceState("", "", url.toString());
onInput();
});
window.addEventListener("popstate", onInput);
let search, searchErr;
async function initialize() {
try {
search = await new Promise((resolve, reject) => {
const script = document.createElement("script");
script.type = "text/javascript";
script.async = true;
script.onload = () => resolve(window.pdocSearch);
script.onerror = (e) => reject(e);
script.src = "../../search.js";
document.getElementsByTagName("head")[0].appendChild(script);
});
} catch (e) {
console.error("Cannot fetch pdoc search index");
searchErr = "Cannot fetch search index.";
}
onInput();
document.querySelector("nav.pdoc").addEventListener("click", e => {
if (e.target.hash) {
searchBox.value = "";
searchBox.dispatchEvent(new Event("input"));
}
});
}
function onInput() {
setContent((() => {
const term = getSearchTerm();
if (!term) {
return null
}
if (searchErr) {
return `<h3>Error: ${searchErr}</h3>`
}
if (!search) {
return "<h3>Searching...</h3>"
}
window.scrollTo({top: 0, left: 0, behavior: 'auto'});
const results = search(term);
let html;
if (results.length === 0) {
html = `No search results for '${escapeHTML(term)}'.`
} else {
html = `<h4>${results.length} search result${results.length > 1 ? "s" : ""} for '${escapeHTML(term)}'.</h4>`;
}
for (let result of results.slice(0, 10)) {
let doc = result.doc;
let url = `../../${doc.modulename.replaceAll(".", "/")}.html`;
if (doc.qualname) {
url += `#${doc.qualname}`;
}
let heading;
switch (result.doc.kind) {
case "function":
if (doc.fullname.endsWith(".__init__")) {
heading = `<span class="name">${doc.fullname.replace(/\.__init__$/, "")}</span>${doc.signature}`;
} else {
heading = `<span class="def">${doc.funcdef}</span> <span class="name">${doc.fullname}</span>${doc.signature}`;
}
break;
case "class":
heading = `<span class="def">class</span> <span class="name">${doc.fullname}</span>`;
if (doc.bases)
heading += `<wbr>(<span class="base">${doc.bases}</span>)`;
heading += `:`;
break;
case "variable":
heading = `<span class="name">${doc.fullname}</span>`;
if (doc.annotation)
heading += `<span class="annotation">${doc.annotation}</span>`;
if (doc.default_value)
heading += `<span class="default_value"> = ${doc.default_value}</span>`;
break;
default:
heading = `<span class="name">${doc.fullname}</span>`;
break;
}
html += `
<section class="search-result">
<a href="${url}" class="attr ${doc.kind}">${heading}</a>
<div class="docstring">${doc.doc}</div>
</section>
`;
}
return html;
})());
}
if (getSearchTerm()) {
initialize();
searchBox.value = getSearchTerm();
onInput();
} else {
searchBox.addEventListener("focus", initialize, {once: true});
}
searchBox.addEventListener("keydown", e => {
if (["ArrowDown", "ArrowUp", "Enter"].includes(e.key)) {
let focused = currentContent.querySelector(".search-result.focused");
if (!focused) {
currentContent.querySelector(".search-result").classList.add("focused");
} else if (
e.key === "ArrowDown"
&& focused.nextElementSibling
&& focused.nextElementSibling.classList.contains("search-result")
) {
focused.classList.remove("focused");
focused.nextElementSibling.classList.add("focused");
focused.nextElementSibling.scrollIntoView({
behavior: "smooth",
block: "nearest",
inline: "nearest"
});
} else if (
e.key === "ArrowUp"
&& focused.previousElementSibling
&& focused.previousElementSibling.classList.contains("search-result")
) {
focused.classList.remove("focused");
focused.previousElementSibling.classList.add("focused");
focused.previousElementSibling.scrollIntoView({
behavior: "smooth",
block: "nearest",
inline: "nearest"
});
} else if (
e.key === "Enter"
) {
focused.querySelector("a").click();
}
}
});
</script></body>
</html>