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Author SHA1 Message Date
Fabian Joswig
0150ef4c0b refactor: imports of scipy.stats in fits simplified. 2022-06-15 14:14:01 +01:00
Fabian Joswig
d600793d0e fix: unreachable statement in input.misc.read_pbp removed. 2022-06-15 14:07:35 +01:00
Fabian Joswig
abdeace107 fix: Modification of parameter with default in Corr.__repr__ fixed. 2022-06-15 14:05:41 +01:00
Fabian Joswig
02403fc282 fix: Modification of parameter with default in input.dobs fixed. 2022-06-15 14:04:07 +01:00
Fabian Joswig
d79aa2cf74 refactor: range in Corr.print and __repr__ renamed to print_range 2022-06-15 14:01:26 +01:00
Fabian Joswig
1f113a3b29 refactor: comparison of constants removed. 2022-06-15 13:48:34 +01:00
Fabian Joswig
16d6e5e8e0
Merge pull request #109 from JanNeuendorf/develop 
Quick fix to m_eff()
 2022-06-14 15:14:14 +01:00
Janneuendorf
e671d38a11 fix 2022-06-14 16:06:08 +02:00
JanNeuendorf
26c57a8d1b
Merge branch 'fjosw:develop' into develop 2022-06-14 15:51:18 +02:00
Janneuendorf
bd6c0a223b Quick fix to corr.m_eff(). Zero values no longer produce errors but are handled as nones in m_eff(). 2022-06-14 15:49:20 +02:00
Fabian Joswig
612e6c742b tests: matplotlib figures explicitly closed in tests 2022-06-14 14:46:45 +01:00
Fabian Joswig
0d02e4d4b9 build: extract version number in setup.py from version.py 2022-06-14 12:02:43 +01:00
Fabian Joswig
5c47188931 build: version number bumped to 2.2.0+dev 2022-06-13 14:04:25 +01:00
Fabian Joswig
2ed815ddcc build: version number bumped to 2.1.3, CHANGELOG updated. 2022-06-13 13:36:14 +01:00
Fabian Joswig
090d2b1e1d
Merge pull request #107 from fjosw/fix/none_array_entries 
Fix/none array entries
 2022-06-13 13:31:18 +01:00
Fabian Joswig
d736c001dc fix: further checks for multi-dimensional correaltors and None entries 
added to methods of Corr class.
 2022-06-13 13:18:37 +01:00
Fabian Joswig
a323d60b79 fix: Exception added when symmetric or anti_symmetric are called on 
multi-dimensional correlator.
 2022-06-13 13:08:05 +01:00
Fabian Joswig
ed50240d29 fix: check for correlator None entries refactored and added to all 
elementary operations. Tests added.
 2022-06-13 12:59:54 +01:00
Fabian Joswig
5359a30b97 fix: Bug in Corr.projected fixed which appears in connection with arrays 
of None as Corr entry.
 2022-06-13 11:59:05 +01:00
Fabian Joswig
0d86df2506 build: Version number bumped to 2.2.0+dev, CHANGELOG added to project 
links in setup.py
 2022-06-10 10:30:00 +01:00
Fabian Joswig
efd6d97d0a docs: CHANGELOG updated, version number bumped to 2.1.2 2022-06-10 10:21:28 +01:00
Fabian Joswig
f49562b895 tests: additional test for least square fits added which probes 
different initial guess and exceptions.

Tolerance in total least square tests relaxed.
 2022-06-10 10:13:49 +01:00
Fabian Joswig
5e550f4321 tests: test for smooth_eigenvalues functionality added. 2022-06-10 09:29:04 +01:00
Fabian Joswig
6aab72cf0e build: typo in setup.py corrected. 2022-06-10 08:57:55 +01:00
Fabian Joswig
60dbc2c6fe build: minimal version numbers for dependencies updated. 2022-06-10 08:56:41 +01:00
Fabian Joswig
78f576a35e fix: Corr.matrix_symmetric now also works if entries of the correlators 
are arrays with at least one None entry.
 2022-06-09 16:47:13 +01:00
Fabian Joswig
8a911cac61 tests: Correlated least square fit tested against jackknife resampling 2022-06-07 10:59:26 +01:00
Fabian Joswig
02ed8ecd32 build: version number bumped to 2.2.0+dev 2022-06-07 10:59:11 +01:00
Fabian Joswig
92285942ac build: Version number bumped to 2.1.1, CHANGELOG updated. 2022-06-06 15:56:19 +01:00
Fabian Joswig
155c329921 fix: bug in error propagation for correlated fits fixed. 2022-06-06 15:47:41 +01:00
Fabian Joswig
c9e0c6e208 tests: linear least_squares fit error estimation tested against jackknife resampling. 2022-06-06 15:11:03 +01:00
Fabian Joswig
6bd724715f fix: Fit_result.gamma_method can now be called with kwargs 2022-06-06 15:04:16 +01:00
Fabian Joswig
0b6b98990d build: scipy version 1 or greater required. 2022-06-01 15:03:55 +01:00
Fabian Joswig
ccb424a251 fix: hide_sigma in Corr.show now ignores the entry at 0 for the 
estimation of the plot range.
 2022-05-31 13:43:34 +01:00
Fabian Joswig
8a785601a6 build: project urls added to setup.py 2022-05-31 12:27:31 +01:00
Fabian Joswig
e89a537f7c build: version number bumped to 2.2.0+dev 2022-05-31 12:11:42 +01:00
Fabian Joswig
2fb4982988 build: version number bumped to 2.1.0 2022-05-31 11:54:26 +01:00
Fabian Joswig
4aae55d1d6 docs: Docstring for fits.least_square extended. 2022-05-31 11:51:59 +01:00
Fabian Joswig
52330b7493 docs: CHANGELOG updated. 2022-05-30 10:33:30 +01:00
Fabian Joswig
46cc5dd792 feat: The desired correlation function extracted with 
input.hadrons.read_meson_hd5 can now also be specified via a tuple of
strings indicating the desired source and sink gamma matrices.
 2022-05-29 13:58:43 +01:00
Fabian Joswig
658c2b30de feat: eigenvalue calculation in pe.covariance is not done if only the 
correlation matrix is requested.
 2022-05-27 14:17:05 +01:00
Fabian Joswig
328c564fdd feat: further improvement of inverse of cholesky decomposed correlation 
matrix.
 2022-05-27 14:00:46 +01:00
Fabian Joswig
30297a4f83 Merge branch 'develop' of github.com:fjosw/pyerrors into develop 2022-05-27 13:50:53 +01:00
Fabian Joswig
09fd1fdf60 feat: rounding errors in inversion of cholesky decomposed correlation 
matrix reduced.
 2022-05-27 13:50:19 +01:00
Fabian Joswig
f02488208a
Merge pull request #102 from fjosw/feature/covariance_idl2 
Feature/covariance idl2
 2022-05-26 15:01:35 +01:00
Fabian Joswig
e7f5961cd6 fix: bug in estimation of chisquare for correlated fit fixed, tests 
added.
 2022-05-26 13:52:05 +01:00
Fabian Joswig
ff5540d667 feat: optimized calculation of the inverse hessian for error propagation 
in fits.
 2022-05-26 10:19:39 +01:00
Fabian Joswig
e6aa679170
Merge pull request #104 from fjosw/feat/prefit 
Prefit correlated fits
 2022-05-26 09:58:37 +01:00
Fabian Joswig
6bbd88a8c1 tests: fit_corr_independent now runs for various methods. 2022-05-25 18:03:46 +01:00
Fabian Joswig
919ba68a52 feat: When least_squares is called with correlated_fit=True the routine 
first performs an uncorrelated fit in order to find appropriate starting
parameters.
 2022-05-25 17:59:29 +01:00