lattice/pyerrors
1
0
Fork 0
mirror of https://github.com/fjosw/pyerrors.git synced 2025-08-23 17:44:41 +02:00
Code Issues Projects Releases Packages Wiki Activity
1392 commits 21 branches 27 tags 46 MiB
Commit graph

1392 commits

This branch
This branch
All branches
Author SHA1 Message Date
Fabian Joswig
cdadbd0fad
 		ci: windows removed from pytest workflow, mac-os python version bumped 
to 3.10
 2023-06-02 16:16:04 +01:00
Fabian Joswig
4886197a03
 		docs: changes to pytest workflow documented in CONTRIBUTING.md 2023-06-02 15:49:42 +01:00
Fabian Joswig
5b80f44485
 		ci: pytest workflow updated to fail on warnings. 2023-06-02 15:48:35 +01:00
Fabian Joswig
e0e2686142
 		fix: bug in _find_correlator fixed. (#193) 2023-06-02 15:46:27 +01:00
Fabian Joswig
09cf6bae5a
 		Merge branch 'master' into develop 2023-06-02 15:11:48 +01:00
Fabian Joswig
ba94cbb718
 		build: version bumped to 2.8.2, CHANGELOG updated. 2023-06-02 15:06:39 +01:00
Fabian Joswig
c6d04cf88b
 		Fix another edge case in _compute_drho (#194) 
* tests: failing test for compute_drho edge case added.

* tests: example file for failing compute_drho added.

* tests: assertion that dvalue stays the same added to compute drho test.

* fix: another edge case in computation of drho fixed.
 2023-06-02 15:05:35 +01:00
Fabian Joswig
525c61ed20
 		Fix another edge case in _compute_drho (#194) 
* tests: failing test for compute_drho edge case added.

* tests: example file for failing compute_drho added.

* tests: assertion that dvalue stays the same added to compute drho test.

* fix: another edge case in computation of drho fixed.
 2023-06-02 15:04:15 +01:00
Justus Kuhlmann
9489b87a7e
 		fix nan to None test (#192) 2023-06-01 14:07:16 +01:00
Fabian Joswig
bc6e7e93cb
 		Merge branch 'master' into develop 2023-06-01 13:42:49 +01:00
Fabian Joswig
07c8a1b71d
 		build: version bumped to 2.8.1, numpy versions >=1.25 excluded. 2023-06-01 13:35:15 +01:00
Fabian Joswig
ff2d4c23e8
 		docs: CHANGELOG updated. 2023-06-01 13:32:59 +01:00
Fabian Joswig
d339015cb3
 		Fix Obs in f-strings without specifier (#190) 
* fix: Conversion of an array with ndim > 0 to a scalar deprecation fixed.

* fix: adjusted maximal value for rho in test_gamma_method_irregular.

* fix: obs in f-strings now work again when no specifier is provided.
 2023-06-01 13:29:24 +01:00
Fabian Joswig
be1d8b2290
 		fix: Conversion of an array with ndim > 0 to a scalar deprecation fixed. (#186) 2023-06-01 13:29:24 +01:00
s-kuberski
b222b116f2
 		Bug fix for edge case in _compute_drho (#189) 2023-06-01 13:29:24 +01:00
Fabian Joswig
02b57817ae
 		fix: adjusted maximal value for rho in test_gamma_method_irregular. (#188) 2023-06-01 13:29:24 +01:00
Fabian Joswig
2acaf1b5db
 		tests: np.alltrue replaced by np.all. 2023-06-01 13:29:24 +01:00
Justus Kuhlmann
0535af992d
 		Feat/files idl xsf (#185) 
* added kwrg idl to ms5_xsf_read

* change output, warn user if expected idl not found
 2023-06-01 13:29:24 +01:00
Justus Kuhlmann
47a4b56617
 		taking care of cols with only None values (#184) 2023-06-01 13:29:24 +01:00
Fabian Joswig
bb43a8afb7
 		Fix Obs in f-strings without specifier (#190) 
* fix: Conversion of an array with ndim > 0 to a scalar deprecation fixed.

* fix: adjusted maximal value for rho in test_gamma_method_irregular.

* fix: obs in f-strings now work again when no specifier is provided.
 2023-05-31 18:07:38 +01:00
Fabian Joswig
ca70c7571b
 		fix: Conversion of an array with ndim > 0 to a scalar deprecation fixed. (#186) 2023-05-31 16:59:27 +01:00
s-kuberski
34fe7f44fc
 		Bug fix for edge case in _compute_drho (#189) 2023-05-30 15:29:22 +01:00
Fabian Joswig
095f7c8a46
 		fix: adjusted maximal value for rho in test_gamma_method_irregular. (#188) 2023-05-30 14:03:01 +01:00
Fabian Joswig
dc73456759
 		tests: np.alltrue replaced by np.all. 2023-05-30 12:52:10 +01:00
Justus Kuhlmann
1a811b04f3
 		Feat/files idl xsf (#185) 
* added kwrg idl to ms5_xsf_read

* change output, warn user if expected idl not found
 2023-05-26 13:01:52 +01:00
Justus Kuhlmann
e97cc519a9
 		taking care of cols with only None values (#184) 2023-05-22 12:37:46 +01:00
Fabian Joswig
bbe74b438c
 		docs: python badge changed to 3.8+ 2023-05-21 17:12:32 +01:00
Fabian Joswig
86c060e79f
 		ci: python 3.7 removed from ci. 2023-05-21 17:11:38 +01:00
Fabian Joswig
21def4aad1
 		build: python 3.7 removed from setup.py 2023-05-21 17:11:14 +01:00
Fabian Joswig
a443b4bb17
 		build: version bumped to 2.9.0-dev. 2023-05-21 17:10:40 +01:00
Fabian Joswig
dfe7de3a03
 		build: version bumped to 2.8.0 2023-05-21 17:06:09 +01:00
Fabian Joswig
889cc327fc
 		docs: CHANGELOG updated. 2023-05-21 17:05:59 +01:00
Fabian Joswig
e9e02749a0
 		fix: dobs import added to input/__init__.py (#181) 2023-05-21 16:56:56 +01:00
s-kuberski
81e4f37934
 		Restored JSON output of dicts with non-string keys (#179) 
* Restored JSON output of dicts with non-string keys

* Use numpy.integer instead of deprecated numpy.int
 2023-05-19 14:58:56 +01:00
Justus Kuhlmann
a5b6f69160
 		Slightly better Typechecking when exporting to SQL (#174) 
* corret type clause

* add tests, changes in create_json_string

* create json-string now gives back None

* revert changes

* fix panda sql export

* add SQL test

* fixed None type export for csv and sql.gz

* move None parsing to json io

* alter regex

* revert changes

* only replace None with empty str when necessary

* fixed deserialze_df for python 3.7

* add more tesets

* fix case where gz was ignored

* hand voer gz explicitly

* replace nan  by None in non-Obs columns

* moved warning to csv export, mroe tests

* only values able to be nan are put in np.isnan()

* added python float for warning
 2023-05-18 17:11:52 +01:00
Fabian Joswig
b75aa741a9
 		feat: color and zorder for prange indicator in Corr.show added. (#178) 2023-05-18 17:06:15 +01:00
s-kuberski
3198088f9c
 		Feat/flow (#176) 
* fix: String conversion of Obs can now handle a dvalue that is NaN or inf

* Feat: Added extraction of w0/a from openQCD files

* Removed unnecessary round in w0 routine

* Improved error handling in fit_t0

* Allowed to change the reference flow time in t0 and w0 determinations.

* Added doc string to fit_t0
 2023-05-16 18:29:13 +01:00
Justus Kuhlmann
5155effbbf
 		Fix/sort names (#177) 
* cosmetic fix in sort_names

* bug fix, more tests
 2023-05-16 18:28:32 +01:00
s-kuberski
15d07de87f
 		fix: String conversion of Obs can now handle a dvalue that is NaN or inf (#173) 2023-05-03 16:30:59 +02:00
Fabian Joswig
ccd911fd17
 		docs: citation info in documentation updated. 2023-04-29 11:09:05 +01:00
Fabian Joswig
0f0dcf47d9
 		docs: citation file corrected. 2023-04-29 10:59:45 +01:00
Fabian Joswig
9bc9910f27
 		docs: citation file updated. 2023-04-29 10:56:23 +01:00
s-kuberski
65a9128a7d
 		Fix/merge idx (#172) 
* Fix: Corrected merging of idls

* Fix: Computation of drho in cases where tau_int is large compared to the chain length

* Removed unnecessary imports

* Refactor list comparisons in obs.py
 2023-04-28 18:14:51 +01:00
Fabian Joswig
1184a0fe76
 		t0 extractions for new Hadrons module (#171) 
* feat: first version of read flow observables for new hadrons module.

* feat: refactored t0 fit in seperate function and added extract_t0_hd5 to
hadrons submodule.
 2023-04-25 08:25:33 +01:00
Fabian Joswig
be061fdc23
 		Feat/str format (#170) 
* feat: _format_uncertainty now accepts a significance.

* feat: __format__ now accepts significance.

* feat: explicit + sign added to format.

* fix: - option removed from format specifier.

* feat: space format added.
 2023-04-20 17:31:37 +01:00
s-kuberski
a214465413
 		Fix/gaps (#169) 
* fix: Fixed range detection in gamma_method

* Corrected test in dobsio

* Changed expansion paradigm in gamma_method

* Extended tests

* Updated docstrings

* Removed unnecessary intermediate variable

* Removed unnecessary code

* Fixed previously introduced bug in output in obs.details()

* Fixed previously introduced bug in window determination

* New criterion for matching gapped replica, fixed determination of w_max and fixed tau_exp analysis with gaps

* tests: split up consistency test for gamma method.

---------

Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>
 2023-04-20 17:30:57 +01:00
Fabian Joswig
edcb4de8aa
 		docs: DOI badge corrected. 2023-04-14 15:41:29 +01:00
Fabian Joswig
05d47a2540
 		docs: DOI badge added. 2023-04-14 15:40:00 +01:00
Justus Kuhlmann
9d67738b32
 		extended extract_t0 by postfix argument, default stays .ms (#168) 
* extended extract_t0 by postfix argument, default stays .ms

* linting
 2023-03-24 11:10:26 +01:00
Fabian Joswig
af364cfd09
 		build: version bumped to 2.8.0-dev 2023-03-21 10:47:25 +01:00