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57 commits

Author SHA1 Message Date
Fabian Joswig
7682e29146
test: tests refactored. 2023-01-20 11:54:43 +00:00
Fabian Joswig
9ba09e6b8f
tests: gamma_method added to fuzzy test. 2023-01-20 11:49:44 +00:00
Fabian Joswig
7bb164120b
tests: fuzzy test for Obs added, test dependencies and documentation 
updated.
 2023-01-20 11:44:31 +00:00
Fabian Joswig
1297415710
test: test for alias gm added. 2023-01-05 11:56:48 +01:00
Fabian Joswig
a8a9bfbd43
tests: test added that checks that Obs.details does not throw an error 
when the error of tau is zero.
 2022-10-21 12:12:27 +01:00
Simon Kuberski
d5a766ee16 feat: Speed up covariance for irregular MC chains 2022-10-21 11:05:54 +02:00
Fabian Joswig
e3f7baa667
tests: test for gapped irregular dtauint added. 2022-10-19 12:04:49 +01:00
Simon Kuberski
89b0c37e76 fix: corrected bias correction of tau_int for irregular chains 2022-10-17 17:40:27 +02:00
Simon Kuberski
fd4c866fdd fix: bug in automatic window for irregular chains fixed 2022-10-17 14:38:23 +02:00
Fabian Joswig
b2d5263ea3 feat: hash method for Obs objects added. 2022-07-01 16:53:08 +01:00
Fabian Joswig
d922b72f3b feat: Obs.reweight method added. 2022-06-23 13:50:24 +01:00
Fabian Joswig
612e6c742b tests: matplotlib figures explicitly closed in tests 2022-06-14 14:46:45 +01:00
Fabian Joswig
5e550f4321 tests: test for smooth_eigenvalues functionality added. 2022-06-10 09:29:04 +01:00
Fabian Joswig
bb0236a556 tests: test covariance vs numpy added. 2022-05-19 14:09:05 +01:00
Fabian Joswig
9011adb0de tests: additional test addedwhich checks that merge and intersction of 
idls agree for identical idls.
 2022-05-19 13:53:33 +01:00
Fabian Joswig
60f9bb6a89 tests: Additional tests for covariance with different idls added. 2022-05-19 13:46:04 +01:00
Fabian Joswig
217d310ca4 tests: test for _intersection_idx extended. 2022-04-28 14:13:29 +01:00
Fabian Joswig
eacc9b19a3 feat: the correlation for two observables with different idls is now based on 
the intersection of two instead of the union. Tests added.
 2022-04-08 11:46:50 +01:00
Fabian Joswig
934d091249 feat: _intersection_idx and _collapse_deltas_for_merge together with 
tests added.
 2022-04-08 11:14:58 +01:00
Fabian Joswig
66997ac993 tests: test for merge_idx added. 2022-04-07 16:14:46 +01:00
Fabian Joswig
7edc617e04 tests: test for covariance of two obs with differently spaced idls 
added.
 2022-04-07 16:09:37 +01:00
Fabian Joswig
40fea8a698 Merge branch 'v2.1.0+dev' into develop 2022-03-31 11:41:25 +01:00
Fabian Joswig
cd2f361a3e tests: tests for linalg and obs extended. 2022-03-24 11:45:18 +00:00
Fabian Joswig
b72897a1bd tests: random data removed from test_gamma_method_standard_data 2022-03-08 11:02:46 +00:00
Fabian Joswig
c446898932 fix: warning for rank deficient covariance matrix is no longer called 
when covobs are involved. Test added.
 2022-03-04 17:15:29 +00:00
Fabian Joswig
ece3c5d2ba tests: additional test added. 2022-03-02 11:49:29 +00:00
Fabian Joswig
da0c43fe9a feat: correlation parameter added to covariance again, tests extended. 2022-03-01 17:46:12 +00:00
Fabian Joswig
8d93ff95f2 tests: further tests for covariance added. 2022-03-01 17:38:42 +00:00
Fabian Joswig
82419b7a88 feat: positive semi-definite estimator for the covariance implemented, 
fits.covariance matrix deprecated, covariance can now handle lists of
observables.
 2022-03-01 09:45:25 +00:00
Fabian Joswig
498a251072 refactor!: if clause in Obs.__init__ eliminated, empty observables need 
to be initialized with means=[] from now on.
 2022-02-28 13:43:49 +00:00
Simon Kuberski
86b1371363 Adjusted function definitions, added test for _merge_idx 2022-02-23 17:51:12 +01:00
Simon Kuberski
5818dbe883 Bugfix in _reduce_deltas. Results were correct, but performance was bad 2022-02-10 14:49:12 +01:00
Fabian Joswig
080e09a07f tests: tests cleaned up, name duplicate in obs_test corrected 2022-02-09 11:23:58 +00:00
Fabian Joswig
f51503555b fix: CObs can now be added and multiplied to as well as subtracted from 
Obs in all combinations
 2022-02-08 17:07:40 +00:00
Fabian Joswig
a6126c84a8 tests: test on iamone made more strict 2022-02-07 14:56:15 +00:00
Fabian Joswig
6971e8cd9b refactor: unnecessary keywords for call to numdifftools removed, test 
against numerical differentiation made stricter.
 2022-02-07 14:51:25 +00:00
Fabian Joswig
9b52a9a615 feat!: dump methods now export to the json.gz format by default. Pickle 
format can be chosen via parameter.
 2022-01-19 10:43:18 +00:00
Fabian Joswig
e880a8221d fix: bug in covariance test corrected 2022-01-18 12:13:44 +00:00
Fabian Joswig
b7da7f4b7e refactor: unnecessary overloading of np.sinc removed, tests added 2021-12-23 12:29:42 +01:00
Fabian Joswig
2ccbd97b39 test: tests for reweighting, merging and correlate extended 2021-12-23 12:20:55 +01:00
Fabian Joswig
ec20ee38a6 feat!: covariance replaced by covariance2, window altered to minimum of 
the window of the two observables. Tests adjusted.
 2021-12-13 17:06:03 +00:00
Fabian Joswig
7c9dc662e6 test: test for empty Obs added 2021-12-10 16:49:30 +00:00
Fabian Joswig
860852b4d8 test: tests slightly extended to improve coverage. 2021-12-09 13:25:06 +00:00
Fabian Joswig
b3a021985b test: test for exceptions in Obs.__init__ extended 2021-12-09 09:45:29 +00:00
Fabian Joswig
53cea6267d test: additional test cases for reweighting and pseudo_Obs added 2021-12-09 07:36:34 +00:00
Fabian Joswig
a7363fb88e test: tests for exceptional cases extended 2021-12-07 17:31:40 +00:00
Fabian Joswig
2d72d730a5 test: r_value test for merge_obs added 2021-12-04 13:09:30 +00:00
Fabian Joswig
a324a7f195 fix: covobs names can no longer contain replica separator '|'. Tests 
added.
 2021-12-02 16:42:29 +00:00
Fabian Joswig
dbcdfacf56 test: covobs name collision test added 2021-12-01 15:54:15 +00:00
Fabian Joswig
e1ab5c6881 test: test for covobs overloading added 2021-12-01 14:59:29 +00:00