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fjosw 2021-11-16 12:00:28 +00:00
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commit bd40fd73ec
3 changed files with 66 additions and 35 deletions
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@ -665,12 +665,14 @@
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="s2">&quot;Description:&quot;</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">tag</span><span class="p">)</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1">&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">))</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="o">*</span> <span class="mi">100</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> (</span><span class="si">%3.3f%%</span><span class="s1">)&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ddvalue</span><span class="p">,</span> <span class="n">percentage</span><span class="p">))</span>
<span class="k">if</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="o">*</span> <span class="mi">100</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> (</span><span class="si">%3.3f%%</span><span class="s1">)&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ddvalue</span><span class="p">,</span> <span class="n">percentage</span><span class="p">))</span>
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39; Ensemble errors:&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">:</span>
@ -737,7 +739,7 @@
<span class="sd"> save : str</span>
<span class="sd"> saves the figure to a file named &#39;save&#39; if.</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
@ -770,7 +772,7 @@
<span class="k">def</span> <span class="nf">plot_rho</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot normalized autocorrelation function time for each ensemble.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
<span class="n">plt</span><span class="o">.</span><span class="n">xlabel</span><span class="p">(</span><span class="s1">&#39;W&#39;</span><span class="p">)</span>
@ -792,7 +794,7 @@
<span class="k">def</span> <span class="nf">plot_rep_dist</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot replica distribution for each ensemble with more than one replicum.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_content</span><span class="p">[</span><span class="n">e_name</span><span class="p">])</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
@ -820,7 +822,7 @@
<span class="sd"> expand : bool</span>
<span class="sd"> show expanded history for irregular Monte Carlo chains (default: True).</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
@ -844,7 +846,7 @@
<span class="k">def</span> <span class="nf">plot_piechart</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot piechart which shows the fractional contribution of each</span>
<span class="sd"> ensemble to the error and returns a dictionary containing the fractions.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Error is 0.0&#39;</span><span class="p">)</span>
@ -2252,12 +2254,14 @@
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="s2">&quot;Description:&quot;</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">tag</span><span class="p">)</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1">&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">))</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="o">*</span> <span class="mi">100</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> (</span><span class="si">%3.3f%%</span><span class="s1">)&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ddvalue</span><span class="p">,</span> <span class="n">percentage</span><span class="p">))</span>
<span class="k">if</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="o">*</span> <span class="mi">100</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> (</span><span class="si">%3.3f%%</span><span class="s1">)&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ddvalue</span><span class="p">,</span> <span class="n">percentage</span><span class="p">))</span>
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39; Ensemble errors:&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">:</span>
@ -2324,7 +2328,7 @@
<span class="sd"> save : str</span>
<span class="sd"> saves the figure to a file named &#39;save&#39; if.</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
@ -2357,7 +2361,7 @@
<span class="k">def</span> <span class="nf">plot_rho</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot normalized autocorrelation function time for each ensemble.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
<span class="n">plt</span><span class="o">.</span><span class="n">xlabel</span><span class="p">(</span><span class="s1">&#39;W&#39;</span><span class="p">)</span>
@ -2379,7 +2383,7 @@
<span class="k">def</span> <span class="nf">plot_rep_dist</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot replica distribution for each ensemble with more than one replicum.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_content</span><span class="p">[</span><span class="n">e_name</span><span class="p">])</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
@ -2407,7 +2411,7 @@
<span class="sd"> expand : bool</span>
<span class="sd"> show expanded history for irregular Monte Carlo chains (default: True).</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
@ -2431,7 +2435,7 @@
<span class="k">def</span> <span class="nf">plot_piechart</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot piechart which shows the fractional contribution of each</span>
<span class="sd"> ensemble to the error and returns a dictionary containing the fractions.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Error is 0.0&#39;</span><span class="p">)</span>
@ -3205,12 +3209,14 @@ of the autocorrelation function (default True)</li>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">tag</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="s2">&quot;Description:&quot;</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">tag</span><span class="p">)</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1">&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">))</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="o">*</span> <span class="mi">100</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> (</span><span class="si">%3.3f%%</span><span class="s1">)&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ddvalue</span><span class="p">,</span> <span class="n">percentage</span><span class="p">))</span>
<span class="k">if</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">nan</span>
<span class="k">else</span><span class="p">:</span>
<span class="n">percentage</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span> <span class="o">*</span> <span class="mi">100</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result</span><span class="se">\t</span><span class="s1"> </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> +/- </span><span class="si">%3.8e</span><span class="s1"> (</span><span class="si">%3.3f%%</span><span class="s1">)&#39;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ddvalue</span><span class="p">,</span> <span class="n">percentage</span><span class="p">))</span>
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
<span class="nb">print</span><span class="p">(</span><span class="s1">&#39; Ensemble errors:&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">:</span>
@ -3362,7 +3368,7 @@ Number of standard errors used for the check.</li>
<span class="sd"> save : str</span>
<span class="sd"> saves the figure to a file named &#39;save&#39; if.</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
@ -3420,7 +3426,7 @@ saves the figure to a file named 'save' if.</li>
<summary>View Source</summary>
<div class="codehilite"><pre><span></span> <span class="k">def</span> <span class="nf">plot_rho</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot normalized autocorrelation function time for each ensemble.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
<span class="n">plt</span><span class="o">.</span><span class="n">xlabel</span><span class="p">(</span><span class="s1">&#39;W&#39;</span><span class="p">)</span>
@ -3460,7 +3466,7 @@ saves the figure to a file named 'save' if.</li>
<summary>View Source</summary>
<div class="codehilite"><pre><span></span> <span class="k">def</span> <span class="nf">plot_rep_dist</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot replica distribution for each ensemble with more than one replicum.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_content</span><span class="p">[</span><span class="n">e_name</span><span class="p">])</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
@ -3506,7 +3512,7 @@ saves the figure to a file named 'save' if.</li>
<span class="sd"> expand : bool</span>
<span class="sd"> show expanded history for irregular Monte Carlo chains (default: True).</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">for</span> <span class="n">e</span><span class="p">,</span> <span class="n">e_name</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">e_names</span><span class="p">):</span>
@ -3555,7 +3561,7 @@ show expanded history for irregular Monte Carlo chains (default: True).</li>
<div class="codehilite"><pre><span></span> <span class="k">def</span> <span class="nf">plot_piechart</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;Plot piechart which shows the fractional contribution of each</span>
<span class="sd"> ensemble to the error and returns a dictionary containing the fractions.&quot;&quot;&quot;</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_names&#39;</span><span class="p">):</span>
<span class="k">if</span> <span class="ow">not</span> <span class="nb">hasattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="s1">&#39;e_dvalue&#39;</span><span class="p">):</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Run the gamma method first.&#39;</span><span class="p">)</span>
<span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dvalue</span> <span class="o">==</span> <span class="mf">0.0</span><span class="p">:</span>
<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">&#39;Error is 0.0&#39;</span><span class="p">)</span>