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Merge branch 'develop' into feat/meas_class
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commit
8c7cd5a74b
16 changed files with 218 additions and 165 deletions
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@ -61,9 +61,9 @@ def test_Obs_exceptions():
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my_obs.plot_rep_dist()
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with pytest.raises(Exception):
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my_obs.plot_piechart()
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with pytest.raises(Exception):
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with pytest.raises(TypeError):
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my_obs.gamma_method(S='2.3')
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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my_obs.gamma_method(tau_exp=2.3)
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my_obs.gamma_method()
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my_obs.details()
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@ -199,7 +199,7 @@ def test_gamma_method_no_windowing():
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assert np.isclose(np.sqrt(np.var(obs.deltas['ens'], ddof=1) / obs.shape['ens']), obs.dvalue)
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obs.gamma_method(S=1.1)
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assert obs.e_tauint['ens'] > 0.5
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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obs.gamma_method(S=-0.2)
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@ -461,6 +461,18 @@ def test_cobs_overloading():
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obs / cobs
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def test_pow():
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data = [1, 2.341, pe.pseudo_Obs(4.8, 0.48, "test_obs"), pe.cov_Obs(1.1, 0.3 ** 2, "test_cov_obs")]
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for d in data:
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assert d * d == d ** 2
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assert d * d * d == d ** 3
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for d2 in data:
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assert np.log(d ** d2) == d2 * np.log(d)
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assert (d ** d2) ** (1 / d2) == d
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def test_reweighting():
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my_obs = pe.Obs([np.random.rand(1000)], ['t'])
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assert not my_obs.reweighted
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@ -478,12 +490,12 @@ def test_reweighting():
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r_obs2 = r_obs[0] * my_obs
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assert r_obs2.reweighted
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my_covobs = pe.cov_Obs(1.0, 0.003, 'cov')
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.reweight(my_obs, [my_covobs])
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my_obs2 = pe.Obs([np.random.rand(1000)], ['t2'])
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.reweight(my_obs, [my_obs + my_obs2])
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.reweight(my_irregular_obs, [my_obs])
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@ -493,10 +505,10 @@ def test_merge_obs():
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merged = pe.merge_obs([my_obs1, my_obs2])
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diff = merged - my_obs2 - my_obs1
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assert diff == -(my_obs1.value + my_obs2.value) / 2
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.merge_obs([my_obs1, my_obs1])
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my_covobs = pe.cov_Obs(1.0, 0.003, 'cov')
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.merge_obs([my_obs1, my_covobs])
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@ -519,11 +531,11 @@ def test_correlate():
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assert corr1 == corr2
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my_obs3 = pe.Obs([np.random.rand(100)], ['t'], idl=[range(2, 102)])
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.correlate(my_obs1, my_obs3)
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my_obs4 = pe.Obs([np.random.rand(99)], ['t'])
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.correlate(my_obs1, my_obs4)
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my_obs5 = pe.Obs([np.random.rand(100)], ['t'], idl=[range(5, 505, 5)])
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@ -532,10 +544,10 @@ def test_correlate():
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assert my_obs5.idl == corr3.idl
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my_new_obs = pe.Obs([np.random.rand(100)], ['q3'])
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.correlate(my_obs1, my_new_obs)
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my_covobs = pe.cov_Obs(1.0, 0.003, 'cov')
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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pe.correlate(my_covobs, my_covobs)
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r_obs = pe.reweight(my_obs1, [my_obs1])[0]
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with pytest.warns(RuntimeWarning):
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@ -762,7 +774,7 @@ def test_gamma_method_irregular():
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my_obs.gm()
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idl += [range(1, 400, 4)]
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my_obs = pe.Obs([dat for i in range(len(idl))], ['%s|%d' % ('A', i) for i in range(len(idl))], idl=idl)
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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my_obs.gm()
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# check cases where tau is large compared to the chain length
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@ -1110,7 +1122,7 @@ def test_jackknife():
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assert np.allclose(tmp_jacks, my_obs.export_jackknife())
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my_new_obs = my_obs + pe.Obs([full_data], ['test2'])
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with pytest.raises(Exception):
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with pytest.raises(ValueError):
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my_new_obs.export_jackknife()
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