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simple multi_test works

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Justus Kuhlmann 2023-09-27 16:55:30 +00:00
parent 44b3759c64
commit 5a8878bc70
1 changed files with 45 additions and 57 deletions
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102
pyerrors/input/sfcf.py
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@ -6,17 +6,7 @@ from ..obs import Obs
from .utils import sort_names, check_idl from .utils import sort_names, check_idl
_corr_type_dict = { def read_sfcf(path, prefix, name, quarks='.*', corr_type="bi", noffset=0, wf=0, wf2=0, version="1.0c", cfg_separator="n", silent=False, **kwargs):
"f_A": "bi",
"g_A": "bi",
"f_P": "bi",
"g_P": "bi",
"f_1": "bb",
"k_1": "bb",
}
def read_sfcf(path, prefix, name, quarks='.*', corr_type="bi", noffset=0, wf1=0, wf2=0, version="1.0c", cfg_separator="n", silent=False, **kwargs):
"""Read sfcf files from given folder structure. """Read sfcf files from given folder structure.
Parameters Parameters
@ -75,12 +65,12 @@ def read_sfcf(path, prefix, name, quarks='.*', corr_type="bi", noffset=0, wf1=0,
list of Observables with length T, observable per timeslice. list of Observables with length T, observable per timeslice.
bb-type correlators have length 1. bb-type correlators have length 1.
""" """
ret = read_sfcf_multi(path, prefix, [name], quark_pairs=[quarks], corr_type=[corr_type], noffset_list=[noffset], wf1_list=[wf1], wf2_list=[wf2], version=version, cfg_separator=cfg_separator, silent=silent, nice_output=True, **kwargs) ret = read_sfcf_multi(path, prefix, [name], quarks_list=[quarks], corr_type_list=[corr_type], noffset_list=[noffset], wf_list=[wf], wf2_list=[wf2], version=version, cfg_separator=cfg_separator, silent=silent, nice_output=True, **kwargs)
return ret return ret
def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=['bi'], noffset_list=[0], wf1_list=[0], wf2_list=[0], version="1.0c", cfg_separator="n", silent=False, nice_output=False, **kwargs): def read_sfcf_multi(path, prefix, name_list, quarks_list=['.*'], corr_type_list=['bi'], noffset_list=[0], wf_list=[0], wf2_list=[0], version="1.0c", cfg_separator="n", silent=False, nice_output=False, **kwargs):
"""Read sfcf files from given folder structure. """Read sfcf files from given folder structure.
Parameters Parameters
@ -139,7 +129,6 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
list of Observables with length T, observable per timeslice. list of Observables with length T, observable per timeslice.
bb-type correlators have length 1. bb-type correlators have length 1.
""" """
internal_ret_dict = {}
if kwargs.get('im'): if kwargs.get('im'):
im = 1 im = 1
@ -206,6 +195,7 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
idl = [] idl = []
# setup dect structures
intern = {} intern = {}
for name, corr_type in zip(name_list, corr_type_list): for name, corr_type in zip(name_list, corr_type_list):
intern[name] = {} intern[name] = {}
@ -213,15 +203,25 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
intern[name]["b2b"] = b2b intern[name]["b2b"] = b2b
intern[name]["single"] = single intern[name]["single"] = single
intern[name]["spec"] = {} intern[name]["spec"] = {}
for quarks in quark_pairs: for quarks in quarks_list:
intern[name]["spec"][quarks] = {} intern[name]["spec"][quarks] = {}
for off in noffset_list: for off in noffset_list:
intern[name]["spec"][quarks][str(off)] = {} intern[name]["spec"][quarks][str(off)] = {}
for w in wf1_list: for w in wf_list:
intern[name]["spec"][quarks][str(off)][str(w)] = {} intern[name]["spec"][quarks][str(off)][str(w)] = {}
for w2 in wf2_list: for w2 in wf2_list:
intern[name]["spec"][quarks][str(off)][str(w)][str(w2)] = {} intern[name]["spec"][quarks][str(off)][str(w)][str(w2)] = {}
internal_ret_dict = {}
for name in name_list:
internal_ret_dict[name] = {}
for quarks in quarks_list:
internal_ret_dict[name][quarks] = {}
for off in noffset_list:
internal_ret_dict[name][quarks][str(off)] = {}
for w in wf_list:
internal_ret_dict[name][quarks][str(off)][str(w)] = {}
if not appended: if not appended:
for i, item in enumerate(ls): for i, item in enumerate(ls):
rep_path = path + '/' + item rep_path = path + '/' + item
@ -247,30 +247,25 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
idl.append(rep_idl) idl.append(rep_idl)
# here we have found all the files we need to look into. # here we have found all the files we need to look into.
if i == 0: if i == 0:
if version == "0.0":
file = path + '/' + item + '/' + sub_ls[0] + '/' + name
else:
if compact:
file = path + '/' + item + '/' + sub_ls[0]
else:
file = path + '/' + item + '/' + sub_ls[0] + '/' + name
for name in name_list: for name in name_list:
internal_ret_dict[name] = {} for quarks in quarks_list:
for quarks in quark_pairs:
internal_ret_dict[name][quarks] = {}
for off in noffset_list: for off in noffset_list:
internal_ret_dict[name][quarks][str(off)] = {} for w in wf_list:
for w in wf1_list:
internal_ret_dict[name][quarks][str(off)][str(w)] = {}
for w2 in wf2_list: for w2 in wf2_list:
internal_ret_dict[name][quarks][str(off)][str(w)][str(w2)] = {}
# here, we want to find the place within the file, # here, we want to find the place within the file,
# where the correlator we need is stored. # where the correlator we need is stored.
# to do so, the pattern needed is put together # to do so, the pattern needed is put together
# from the input values # from the input values
if version == "0.0": intern[name]["spec"][quarks][str(off)][str(w)][str(w2)]["pattern"] = _make_pattern(version, name, off, w, w2, intern[name]['b2b'], quarks)
file = path + '/' + item + '/' + sub_ls[0] + '/' + name start_read, T = _find_correlator(file, version, intern[name]["spec"][quarks][str(off)][str(w)][str(w2)]["pattern"], intern[name]['b2b'], silent=silent)
else:
if compact:
file = path + '/' + item + '/' + sub_ls[0]
else:
file = path + '/' + item + '/' + sub_ls[0] + '/' + name
intern[name]["spec"][quarks][str(off)][str(w)][str(w2)]["pattern"] = _make_pattern(version, name, off, w, w2, b2b, quarks)
start_read, T = _find_correlator(file, version, intern[name]["spec"][quarks][str(off)][str(w)][str(w2)]["pattern"], b2b, silent=silent)
intern[name]["spec"][quarks][str(off)][str(w)][str(w2)]["start"] = start_read intern[name]["spec"][quarks][str(off)][str(w)][str(w2)]["start"] = start_read
intern[name]["T"] = T intern[name]["T"] = T
# preparing the datastructure # preparing the datastructure
@ -282,9 +277,13 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
if compact: if compact:
rep_deltas = _read_compact_rep(path, item, sub_ls, intern, im) rep_deltas = _read_compact_rep(path, item, sub_ls, intern, im)
for name in name_list:
for t in range(T): for quarks in quarks_list:
internal_ret_dict[name][quarks][str(off)][str(w)][str(w2)][t].append(rep_deltas[name][quarks][str(off)][str(w)][str(w2)][t]) for off in noffset_list:
for w in wf_list:
for w2 in wf2_list:
for t in range(intern[name]["T"]):
internal_ret_dict[name][quarks][str(off)][str(w)][str(w2)][t].append(rep_deltas[name][quarks][str(off)][str(w)][str(w2)][t])
else: else:
for t in range(T): for t in range(T):
deltas[t].append(np.zeros(no_cfg)) deltas[t].append(np.zeros(no_cfg))
@ -307,22 +306,16 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
ls = list(set(ls) - set([exc])) ls = list(set(ls) - set([exc]))
ls = sort_names(ls) ls = sort_names(ls)
for name in name_list: for name in name_list:
internal_ret_dict[name] = {} for quarks in quarks_list:
for quarks in quark_pairs:
internal_ret_dict[name][quarks] = {}
for off in noffset_list: for off in noffset_list:
internal_ret_dict[name][quarks][str(off)] = {} for w in wf_list:
for w in wf1_list:
internal_ret_dict[name][quarks][str(off)][str(w)] = {}
for w2 in wf2_list: for w2 in wf2_list:
internal_ret_dict[name][quarks][str(off)][str(w)][str(w2)] = {} pattern = _make_pattern(version, name, off, w, w2, intern[name]['b2b'], quarks)
pattern = _make_pattern(version, name, off, w, w2, b2b, quarks)
deltas = [] deltas = []
for rep, file in enumerate(ls): for rep, file in enumerate(ls):
rep_idl = [] rep_idl = []
filename = path + '/' + file filename = path + '/' + file
T, rep_idl, rep_data = _read_append_rep(filename, pattern, b2b, cfg_separator, im, single) T, rep_idl, rep_data = _read_append_rep(filename, pattern, intern[name]['b2b'], cfg_separator, im, single)
if 'T' not in intern[name]: if 'T' not in intern[name]:
intern[name]['T'] = T intern[name]['T'] = T
if rep == 0: if rep == 0:
@ -349,14 +342,13 @@ def read_sfcf_multi(path, prefix, name_list, quark_pairs=['.*'], corr_type_list=
result_dict = {} result_dict = {}
for name in name_list: for name in name_list:
result_dict[name] = {} result_dict[name] = {}
for quarks in quark_pairs: for quarks in quarks_list:
result_dict[name][quarks] = {} result_dict[name][quarks] = {}
for off in noffset_list: for off in noffset_list:
result_dict[name][quarks][str(off)] = {} result_dict[name][quarks][str(off)] = {}
for w in wf1_list: for w in wf_list:
result_dict[name][quarks][str(off)][str(w)] = {} result_dict[name][quarks][str(off)][str(w)] = {}
for w2 in wf2_list: for w2 in wf2_list:
result_dict[name][quarks][str(off)][str(w)][str(w2)] = {}
result = [] result = []
for t in range(intern[name]["T"]): for t in range(intern[name]["T"]):
result.append(Obs(internal_ret_dict[name][quarks][str(off)][str(w)][str(w2)][t], new_names, idl=idl)) result.append(Obs(internal_ret_dict[name][quarks][str(off)][str(w)][str(w2)][t], new_names, idl=idl))
@ -450,7 +442,6 @@ def _read_compact_file(rep_path, cfg_file, intern, im):
return_vals = {} return_vals = {}
with open(rep_path + cfg_file) as fp: with open(rep_path + cfg_file) as fp:
lines = fp.readlines() lines = fp.readlines()
return_vals = {}
for name in intern.keys(): for name in intern.keys():
return_vals[name] = {} return_vals[name] = {}
for quarks in intern[name]["spec"].keys(): for quarks in intern[name]["spec"].keys():
@ -497,10 +488,10 @@ def _read_compact_rep(path, rep, sub_ls, intern, im_list):
for t in range(intern[name]["T"]): for t in range(intern[name]["T"]):
deltas.append(np.zeros(no_cfg)) deltas.append(np.zeros(no_cfg))
return_vals[name][quarks][off][w][w2] = deltas return_vals[name][quarks][off][w][w2] = deltas
for cfg in range(no_cfg): for cfg in range(no_cfg):
cfg_file = sub_ls[cfg] cfg_file = sub_ls[cfg]
cfg_data = _read_compact_file(rep_path, cfg_file, intern, im_list) cfg_data = _read_compact_file(rep_path, cfg_file, intern, im_list)
print(cfg_data)
for name in intern.keys(): for name in intern.keys():
for quarks in intern[name]["spec"].keys(): for quarks in intern[name]["spec"].keys():
for off in intern[name]["spec"][quarks].keys(): for off in intern[name]["spec"][quarks].keys():
@ -529,8 +520,6 @@ def _read_chunk(chunk, gauge_line, cfg_sep, start_read, T, corr_line, b2b, patte
def _read_append_rep(filename, pattern, b2b, cfg_separator, im, single): def _read_append_rep(filename, pattern, b2b, cfg_separator, im, single):
print(b2b)
print(single)
with open(filename, 'r') as fp: with open(filename, 'r') as fp:
content = fp.readlines() content = fp.readlines()
data_starts = [] data_starts = []
@ -615,11 +604,10 @@ def _get_appended_rep_names(ls, prefix, name, ens_name=None):
def _reduce_dict(d): def _reduce_dict(d):
print(d)
for key in d.keys(): for key in d.keys():
if isinstance(d[key], dict): if isinstance(d[key], dict):
d = _reduce_dict(d[key]) ret = _reduce_dict(d[key])
else: else:
if len(list(d.keys())) == 1: if len(list(d.keys())) == 1:
d = d[list(d.keys())[0]] ret = d[list(d.keys())[0]]
return d return ret