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jkuhl-uni 2022-12-21 17:47:01 +01:00
parent f9fe5c7ec9
commit 3fdbc371b2
1 changed files with 48 additions and 40 deletions
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26
pyerrors/input/openQCD.py
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@ -1025,12 +1025,14 @@ def read_ms5_xsf(path, prefix, qc, corr, sep = "r", **kwargs):
struct.error struct.error
If there is an error unpacking binary data. If there is an error unpacking binary data.
""" """
found = [] found = []
files = [] files = []
names = [] names = []
for (dirpath, dirnames, filenames) in os.walk(path + "/"): for (dirpath, dirnames, filenames) in os.walk(path + "/"):
found.extend(filenames) found.extend(filenames)
break break
for f in found: for f in found:
if fnmatch.fnmatch(f, prefix + "*.ms5_xsf_" + qc + ".dat"): if fnmatch.fnmatch(f, prefix + "*.ms5_xsf_" + qc + ".dat"):
files.append(f) files.append(f)
@ -1064,8 +1066,7 @@ def read_ms5_xsf(path, prefix, qc, corr, sep = "r", **kwargs):
t = fp.read(4) t = fp.read(4)
tmax = struct.unpack('i', t)[0] tmax = struct.unpack('i', t)[0]
t = fp.read(4) t = fp.read(4)
bnd = struct.unpack('i', t)[0] # bnd = struct.unpack('i', t)[0]
placesBI = ["gS", "gP", placesBI = ["gS", "gP",
"gA", "gV", "gA", "gV",
@ -1095,14 +1096,18 @@ def read_ms5_xsf(path, prefix, qc, corr, sep = "r", **kwargs):
cnfg = asascii[0] cnfg = asascii[0]
cnfgs[repnum].append(cnfg) cnfgs[repnum].append(cnfg)
if not corr in placesBB: if corr not in placesBB:
tmpcorr = asascii[1 + 2 * tmax * placesBI.index(corr):1 + 2 * tmax * placesBI.index(corr) + 2 * tmax] tmpcorr = asascii[1 + 2 * tmax * placesBI.index(corr):1 + 2 * tmax * placesBI.index(corr) + 2 * tmax]
else: else:
tmpcorr = asascii[1 + 2 * tmax * len(placesBI) + 2 * placesBB.index(corr):1 + 2 * tmax * len(placesBI) + 2 * placesBB.index(corr) + 2] tmpcorr = asascii[1 + 2 * tmax * len(placesBI) + 2 * placesBB.index(corr):1 + 2 * tmax * len(placesBI) + 2 * placesBB.index(corr) + 2]
corrres = [[], []] corrres = [[], []]
for i in range(len(tmpcorr)): corrres[i%2].append(tmpcorr[i]) for i in range(len(tmpcorr)):
for t in range(int(len(tmpcorr)/2)): realsamples[repnum][t].append(corrres[0][t]) corrres[i % 2].append(tmpcorr[i])
for t in range(int(len(tmpcorr)/2)): imagsamples[repnum][t].append(corrres[1][t]) for t in range(int(len(tmpcorr) / 2)):
realsamples[repnum][t].append(corrres[0][t])
for t in range(int(len(tmpcorr) / 2)):
imagsamples[repnum][t].append(corrres[1][t])
repnum += 1 repnum += 1
s = "Read correlator " + corr + " from " + str(repnum) + " replika with " + str(len(realsamples[0][t])) s = "Read correlator " + corr + " from " + str(repnum) + " replika with " + str(len(realsamples[0][t]))
@ -1118,7 +1123,10 @@ def read_ms5_xsf(path, prefix, qc, corr, sep = "r", **kwargs):
imagObs = [] imagObs = []
compObs = [] compObs = []
for t in range(int(len(tmpcorr)/2)): realObs.append(Obs([realsamples[rep][t] for rep in range(repnum)], names = names, idl = cnfgs)) for t in range(int(len(tmpcorr) / 2)):
for t in range(int(len(tmpcorr)/2)): imagObs.append(Obs([imagsamples[rep][t] for rep in range(repnum)], names = names, idl = cnfgs)) realObs.append(Obs([realsamples[rep][t] for rep in range(repnum)], names=names, idl=cnfgs))
for t in range(int(len(tmpcorr)/2)): compObs.append(CObs(realObs[t], imagObs[t])) for t in range(int(len(tmpcorr) / 2)):
imagObs.append(Obs([imagsamples[rep][t] for rep in range(repnum)], names=names, idl=cnfgs))
for t in range(int(len(tmpcorr) / 2)):
compObs.append(CObs(realObs[t], imagObs[t]))
return Corr(compObs) return Corr(compObs)