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Documentation updated
This commit is contained in:
fjosw
parent
ee003cfd87
commit
1538e2b1ba
2 changed files with 24 additions and 36 deletions
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@ -74,6 +74,9 @@
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<li>
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<a class="variable" href="#Obs.filter_eps">filter_eps</a>
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</li>
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<li>
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<a class="variable" href="#Obs.names">names</a>
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</li>
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<li>
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<a class="variable" href="#Obs.shape">shape</a>
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</li>
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@ -239,9 +242,6 @@
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<li>
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<a class="variable" href="#Obs.is_merged">is_merged</a>
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</li>
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<li>
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<a class="variable" href="#Obs.names">names</a>
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</li>
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<li>
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<a class="variable" href="#Obs.tau_exp">tau_exp</a>
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</li>
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@ -391,7 +391,7 @@
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<span class="sd"> already subtracted from the samples</span>
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<span class="sd"> """</span>
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<span class="k">if</span> <span class="n">means</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">samples</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">if</span> <span class="n">means</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">):</span>
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<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">names</span><span class="p">):</span>
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<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Length of samples and names incompatible.'</span><span class="p">)</span>
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<span class="k">if</span> <span class="n">idl</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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@ -409,11 +409,7 @@
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<span class="k">if</span> <span class="nb">min</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">x</span><span class="p">)</span> <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">samples</span><span class="p">)</span> <span class="o"><=</span> <span class="mi">4</span><span class="p">:</span>
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<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Samples have to have at least 5 entries.'</span><span class="p">)</span>
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<span class="k">if</span> <span class="n">names</span><span class="p">:</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">names</span> <span class="o">=</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">names</span><span class="p">)</span>
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<span class="k">else</span><span class="p">:</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">names</span> <span class="o">=</span> <span class="p">[]</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">shape</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">r_values</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">deltas</span> <span class="o">=</span> <span class="p">{}</span>
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@ -423,7 +419,7 @@
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<span class="bp">self</span><span class="o">.</span><span class="n">covobs</span> <span class="o">=</span> <span class="n">covobs</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">idl</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="k">if</span> <span class="n">samples</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">):</span>
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<span class="k">if</span> <span class="n">idl</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">for</span> <span class="n">name</span><span class="p">,</span> <span class="n">idx</span> <span class="ow">in</span> <span class="nb">sorted</span><span class="p">(</span><span class="nb">zip</span><span class="p">(</span><span class="n">names</span><span class="p">,</span> <span class="n">idl</span><span class="p">)):</span>
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<span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">idx</span><span class="p">,</span> <span class="nb">range</span><span class="p">):</span>
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@ -1955,7 +1951,7 @@
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<span class="sd"> co : Covobs</span>
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<span class="sd"> Covobs to be embedded into the Obs</span>
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<span class="sd"> """</span>
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<span class="n">o</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">(</span><span class="kc">None</span><span class="p">,</span> <span class="kc">None</span><span class="p">)</span>
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<span class="n">o</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">([],</span> <span class="p">[])</span>
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<span class="n">o</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">co</span><span class="o">.</span><span class="n">value</span>
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<span class="n">o</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">co</span><span class="o">.</span><span class="n">name</span><span class="p">)</span>
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<span class="n">o</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">co</span><span class="o">.</span><span class="n">name</span><span class="p">]</span> <span class="o">=</span> <span class="n">co</span>
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@ -2050,7 +2046,7 @@
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<span class="sd"> already subtracted from the samples</span>
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<span class="sd"> """</span>
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<span class="k">if</span> <span class="n">means</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">samples</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">if</span> <span class="n">means</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">):</span>
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<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">names</span><span class="p">):</span>
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<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Length of samples and names incompatible.'</span><span class="p">)</span>
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<span class="k">if</span> <span class="n">idl</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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@ -2068,11 +2064,7 @@
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<span class="k">if</span> <span class="nb">min</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">x</span><span class="p">)</span> <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">samples</span><span class="p">)</span> <span class="o"><=</span> <span class="mi">4</span><span class="p">:</span>
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<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Samples have to have at least 5 entries.'</span><span class="p">)</span>
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<span class="k">if</span> <span class="n">names</span><span class="p">:</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">names</span> <span class="o">=</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">names</span><span class="p">)</span>
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<span class="k">else</span><span class="p">:</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">names</span> <span class="o">=</span> <span class="p">[]</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">shape</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">r_values</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">deltas</span> <span class="o">=</span> <span class="p">{}</span>
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@ -2082,7 +2074,7 @@
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<span class="bp">self</span><span class="o">.</span><span class="n">covobs</span> <span class="o">=</span> <span class="n">covobs</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">idl</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="k">if</span> <span class="n">samples</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">):</span>
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<span class="k">if</span> <span class="n">idl</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">for</span> <span class="n">name</span><span class="p">,</span> <span class="n">idx</span> <span class="ow">in</span> <span class="nb">sorted</span><span class="p">(</span><span class="nb">zip</span><span class="p">(</span><span class="n">names</span><span class="p">,</span> <span class="n">idl</span><span class="p">)):</span>
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<span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">idx</span><span class="p">,</span> <span class="nb">range</span><span class="p">):</span>
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@ -2847,7 +2839,7 @@ this overwrites the standard value for that ensemble.</li>
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<span class="sd"> already subtracted from the samples</span>
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<span class="sd"> """</span>
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<span class="k">if</span> <span class="n">means</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">samples</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">if</span> <span class="n">means</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">):</span>
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<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">names</span><span class="p">):</span>
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<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Length of samples and names incompatible.'</span><span class="p">)</span>
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<span class="k">if</span> <span class="n">idl</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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@ -2865,11 +2857,7 @@ this overwrites the standard value for that ensemble.</li>
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<span class="k">if</span> <span class="nb">min</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">x</span><span class="p">)</span> <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">samples</span><span class="p">)</span> <span class="o"><=</span> <span class="mi">4</span><span class="p">:</span>
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<span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s1">'Samples have to have at least 5 entries.'</span><span class="p">)</span>
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<span class="k">if</span> <span class="n">names</span><span class="p">:</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">names</span> <span class="o">=</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">names</span><span class="p">)</span>
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<span class="k">else</span><span class="p">:</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">names</span> <span class="o">=</span> <span class="p">[]</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">shape</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">r_values</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">deltas</span> <span class="o">=</span> <span class="p">{}</span>
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@ -2879,7 +2867,7 @@ this overwrites the standard value for that ensemble.</li>
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<span class="bp">self</span><span class="o">.</span><span class="n">covobs</span> <span class="o">=</span> <span class="n">covobs</span>
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<span class="bp">self</span><span class="o">.</span><span class="n">idl</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="k">if</span> <span class="n">samples</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">samples</span><span class="p">):</span>
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<span class="k">if</span> <span class="n">idl</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
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<span class="k">for</span> <span class="n">name</span><span class="p">,</span> <span class="n">idx</span> <span class="ow">in</span> <span class="nb">sorted</span><span class="p">(</span><span class="nb">zip</span><span class="p">(</span><span class="n">names</span><span class="p">,</span> <span class="n">idl</span><span class="p">)):</span>
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<span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">idx</span><span class="p">,</span> <span class="nb">range</span><span class="p">):</span>
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@ -3014,6 +3002,15 @@ already subtracted from the samples</li>
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</div>
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<div id="Obs.names" class="classattr">
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<div class="attr variable"><a class="headerlink" href="#Obs.names">#  </a>
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<span class="name">names</span>
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</div>
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</div>
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<div id="Obs.shape" class="classattr">
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<div class="attr variable"><a class="headerlink" href="#Obs.shape">#  </a>
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@ -4273,15 +4270,6 @@ should agree with samples from a full jackknife analysis up to O(1/N).</li>
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</div>
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<div id="Obs.names" class="classattr">
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<div class="attr variable"><a class="headerlink" href="#Obs.names">#  </a>
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<span class="name">names</span>
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</div>
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</div>
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<div id="Obs.tau_exp" class="classattr">
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<div class="attr variable"><a class="headerlink" href="#Obs.tau_exp">#  </a>
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@ -5371,7 +5359,7 @@ list of the Obs object to be combined</li>
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<span class="sd"> co : Covobs</span>
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<span class="sd"> Covobs to be embedded into the Obs</span>
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<span class="sd"> """</span>
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<span class="n">o</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">(</span><span class="kc">None</span><span class="p">,</span> <span class="kc">None</span><span class="p">)</span>
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<span class="n">o</span> <span class="o">=</span> <span class="n">Obs</span><span class="p">([],</span> <span class="p">[])</span>
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<span class="n">o</span><span class="o">.</span><span class="n">_value</span> <span class="o">=</span> <span class="n">co</span><span class="o">.</span><span class="n">value</span>
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<span class="n">o</span><span class="o">.</span><span class="n">names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">co</span><span class="o">.</span><span class="n">name</span><span class="p">)</span>
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<span class="n">o</span><span class="o">.</span><span class="n">covobs</span><span class="p">[</span><span class="n">co</span><span class="o">.</span><span class="n">name</span><span class="p">]</span> <span class="o">=</span> <span class="n">co</span>
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