Updated BDIO

This commit is contained in:
Alberto Ramos 2022-06-12 10:34:15 +02:00
parent dc2e9fa6c9
commit 99c8286f11

View file

@ -6,16 +6,16 @@ uuid = "a4c015fc-c6ff-483c-b24f-f7ea428134e9"
version = "0.0.1" version = "0.0.1"
[[AbstractFFTs]] [[AbstractFFTs]]
deps = ["LinearAlgebra"] deps = ["ChainRulesCore", "LinearAlgebra"]
git-tree-sha1 = "485ee0867925449198280d4af84bdb46a2a404d0" git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4"
uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
version = "1.0.1" version = "1.1.0"
[[Adapt]] [[Adapt]]
deps = ["LinearAlgebra"] deps = ["LinearAlgebra"]
git-tree-sha1 = "9faf218ea18c51fcccaf956c8d39614c9d30fe8b" git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f"
uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
version = "3.3.2" version = "3.3.3"
[[ArgTools]] [[ArgTools]]
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
@ -24,8 +24,8 @@ uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
[[BDIO]] [[BDIO]]
deps = ["Documenter", "Nettle"] deps = ["Documenter", "Nettle", "Test"]
git-tree-sha1 = "31aa5298af4936ad33dd39f43ef0c3f7c45fb197" git-tree-sha1 = "45f43efe91dcda1939cfa5b0b028ea941afdc367"
repo-rev = "master" repo-rev = "master"
repo-url = "https://gitlab.ift.uam-csic.es/alberto/bdio.jl.git" repo-url = "https://gitlab.ift.uam-csic.es/alberto/bdio.jl.git"
uuid = "375f315e-f2c4-11e9-2ef9-134f02f79e27" uuid = "375f315e-f2c4-11e9-2ef9-134f02f79e27"
@ -41,9 +41,9 @@ version = "0.2.0"
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
[[CEnum]] [[CEnum]]
git-tree-sha1 = "215a9aa4a1f23fbd05b92769fdd62559488d70e9" git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90"
uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82"
version = "0.4.1" version = "0.4.2"
[[CUDA]] [[CUDA]]
deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "TimerOutputs"] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "TimerOutputs"]
@ -53,21 +53,21 @@ version = "3.6.2"
[[ChainRulesCore]] [[ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"] deps = ["Compat", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "926870acb6cbcf029396f2f2de030282b6bc1941" git-tree-sha1 = "9489214b993cd42d17f44c36e359bf6a7c919abf"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.11.4" version = "1.15.0"
[[ChangesOfVariables]] [[ChangesOfVariables]]
deps = ["ChainRulesCore", "LinearAlgebra", "Test"] deps = ["ChainRulesCore", "LinearAlgebra", "Test"]
git-tree-sha1 = "bf98fa45a0a4cee295de98d4c1462be26345b9a1" git-tree-sha1 = "1e315e3f4b0b7ce40feded39c73049692126cf53"
uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0"
version = "0.1.2" version = "0.1.3"
[[Compat]] [[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] deps = ["Dates", "LinearAlgebra", "UUIDs"]
git-tree-sha1 = "44c37b4636bc54afac5c574d2d02b625349d6582" git-tree-sha1 = "924cdca592bc16f14d2f7006754a621735280b74"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "3.41.0" version = "4.1.0"
[[CompilerSupportLibraries_jll]] [[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"] deps = ["Artifacts", "Libdl"]
@ -77,14 +77,6 @@ uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"
deps = ["Printf"] deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
[[DelimitedFiles]]
deps = ["Mmap"]
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"
[[Distributed]]
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
[[DocStringExtensions]] [[DocStringExtensions]]
deps = ["LibGit2"] deps = ["LibGit2"]
git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b"
@ -93,34 +85,37 @@ version = "0.8.6"
[[Documenter]] [[Documenter]]
deps = ["ANSIColoredPrinters", "Base64", "Dates", "DocStringExtensions", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"] deps = ["ANSIColoredPrinters", "Base64", "Dates", "DocStringExtensions", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"]
git-tree-sha1 = "f425293f7e0acaf9144de6d731772de156676233" git-tree-sha1 = "f7809f532671564e48cd81627ddcfb1ba670f87d"
uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4" uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
version = "0.27.10" version = "0.27.19"
[[Downloads]] [[Downloads]]
deps = ["ArgTools", "LibCURL", "NetworkOptions"] deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
[[ExprTools]] [[ExprTools]]
git-tree-sha1 = "b7e3d17636b348f005f11040025ae8c6f645fe92" git-tree-sha1 = "56559bbef6ca5ea0c0818fa5c90320398a6fbf8d"
uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04"
version = "0.1.6" version = "0.1.8"
[[FileWatching]]
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
[[GMP_jll]] [[GMP_jll]]
deps = ["Artifacts", "Libdl"] deps = ["Artifacts", "Libdl"]
uuid = "781609d7-10c4-51f6-84f2-b8444358ff6d" uuid = "781609d7-10c4-51f6-84f2-b8444358ff6d"
[[GPUArrays]] [[GPUArrays]]
deps = ["Adapt", "LinearAlgebra", "Printf", "Random", "Serialization", "Statistics"] deps = ["Adapt", "LLVM", "LinearAlgebra", "Printf", "Random", "Serialization", "Statistics"]
git-tree-sha1 = "d9681e61fbce7dde48684b40bdb1a319c4083be7" git-tree-sha1 = "c783e8883028bf26fb05ed4022c450ef44edd875"
uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7"
version = "8.1.3" version = "8.3.2"
[[GPUCompiler]] [[GPUCompiler]]
deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "TimerOutputs", "UUIDs"] deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "TimerOutputs", "UUIDs"]
git-tree-sha1 = "2cac236070c2c4b36de54ae9146b55ee2c34ac7a" git-tree-sha1 = "647a54f196b5ffb7c3bc2fec5c9a57fa273354cc"
uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55"
version = "0.13.10" version = "0.13.14"
[[IOCapture]] [[IOCapture]]
deps = ["Logging", "Random"] deps = ["Logging", "Random"]
@ -134,9 +129,9 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
[[InverseFunctions]] [[InverseFunctions]]
deps = ["Test"] deps = ["Test"]
git-tree-sha1 = "a7254c0acd8e62f1ac75ad24d5db43f5f19f3c65" git-tree-sha1 = "b3364212fb5d870f724876ffcd34dd8ec6d98918"
uuid = "3587e190-3f89-42d0-90ee-14403ec27112" uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
version = "0.1.2" version = "0.1.7"
[[IrrationalConstants]] [[IrrationalConstants]]
git-tree-sha1 = "7fd44fd4ff43fc60815f8e764c0f352b83c49151" git-tree-sha1 = "7fd44fd4ff43fc60815f8e764c0f352b83c49151"
@ -145,27 +140,27 @@ version = "0.1.1"
[[JLLWrappers]] [[JLLWrappers]]
deps = ["Preferences"] deps = ["Preferences"]
git-tree-sha1 = "642a199af8b68253517b80bd3bfd17eb4e84df6e" git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1"
uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
version = "1.3.0" version = "1.4.1"
[[JSON]] [[JSON]]
deps = ["Dates", "Mmap", "Parsers", "Unicode"] deps = ["Dates", "Mmap", "Parsers", "Unicode"]
git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.21.2" version = "0.21.3"
[[LLVM]] [[LLVM]]
deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"]
git-tree-sha1 = "7cc22e69995e2329cc047a879395b2b74647ab5f" git-tree-sha1 = "e7e9184b0bf0158ac4e4aa9daf00041b5909bf1a"
uuid = "929cbde3-209d-540e-8aea-75f648917ca0" uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
version = "4.7.0" version = "4.14.0"
[[LLVMExtra_jll]] [[LLVMExtra_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg", "TOML"]
git-tree-sha1 = "c5fc4bef251ecd37685bea1c4068a9cfa41e8b9a" git-tree-sha1 = "771bfe376249626d3ca12bcd58ba243d3f961576"
uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab"
version = "0.0.13+0" version = "0.0.16+0"
[[LazyArtifacts]] [[LazyArtifacts]]
deps = ["Artifacts", "Pkg"] deps = ["Artifacts", "Pkg"]
@ -191,14 +186,14 @@ uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
[[LinearAlgebra]] [[LinearAlgebra]]
deps = ["Libdl"] deps = ["Libdl", "libblastrampoline_jll"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
[[LogExpFunctions]] [[LogExpFunctions]]
deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"]
git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" git-tree-sha1 = "09e4b894ce6a976c354a69041a04748180d43637"
uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
version = "0.3.6" version = "0.3.15"
[[Logging]] [[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
@ -232,6 +227,10 @@ version = "3.7.2+0"
[[NetworkOptions]] [[NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
[[OpenBLAS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
[[OpenLibm_jll]] [[OpenLibm_jll]]
deps = ["Artifacts", "Libdl"] deps = ["Artifacts", "Libdl"]
uuid = "05823500-19ac-5b8b-9628-191a04bc5112" uuid = "05823500-19ac-5b8b-9628-191a04bc5112"
@ -244,9 +243,9 @@ version = "0.5.5+0"
[[Parsers]] [[Parsers]]
deps = ["Dates"] deps = ["Dates"]
git-tree-sha1 = "d7fa6237da8004be601e19bd6666083056649918" git-tree-sha1 = "1285416549ccfcdf0c50d4997a94331e88d68413"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "2.1.3" version = "2.3.1"
[[Pkg]] [[Pkg]]
deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
@ -254,9 +253,9 @@ uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
[[Preferences]] [[Preferences]]
deps = ["TOML"] deps = ["TOML"]
git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d"
uuid = "21216c6a-2e73-6563-6e65-726566657250" uuid = "21216c6a-2e73-6563-6e65-726566657250"
version = "1.2.3" version = "1.3.0"
[[Printf]] [[Printf]]
deps = ["Unicode"] deps = ["Unicode"]
@ -267,14 +266,14 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
[[Random]] [[Random]]
deps = ["Serialization"] deps = ["SHA", "Serialization"]
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
[[Random123]] [[Random123]]
deps = ["Libdl", "Random", "RandomNumbers"] deps = ["Random", "RandomNumbers"]
git-tree-sha1 = "0e8b146557ad1c6deb1367655e052276690e71a3" git-tree-sha1 = "afeacaecf4ed1649555a19cb2cad3c141bbc9474"
uuid = "74087812-796a-5b5d-8853-05524746bad3" uuid = "74087812-796a-5b5d-8853-05524746bad3"
version = "1.4.2" version = "1.5.0"
[[RandomNumbers]] [[RandomNumbers]]
deps = ["Random", "Requires"] deps = ["Random", "Requires"]
@ -289,9 +288,9 @@ version = "1.2.2"
[[Requires]] [[Requires]]
deps = ["UUIDs"] deps = ["UUIDs"]
git-tree-sha1 = "8f82019e525f4d5c669692772a6f4b0a58b06a6a" git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7"
uuid = "ae029012-a4dd-5104-9daa-d747884805df" uuid = "ae029012-a4dd-5104-9daa-d747884805df"
version = "1.2.0" version = "1.3.0"
[[SHA]] [[SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
@ -299,10 +298,6 @@ uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
[[Serialization]] [[Serialization]]
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
[[SharedArrays]]
deps = ["Distributed", "Mmap", "Random", "Serialization"]
uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"
[[Sockets]] [[Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc" uuid = "6462fe0b-24de-5631-8697-dd941f90decc"
@ -312,9 +307,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
[[SpecialFunctions]] [[SpecialFunctions]]
deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
git-tree-sha1 = "e08890d19787ec25029113e88c34ec20cac1c91e" git-tree-sha1 = "a9e798cae4867e3a41cae2dd9eb60c047f1212db"
uuid = "276daf66-3868-5448-9aa4-cd146d93841b" uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
version = "2.0.0" version = "2.1.6"
[[Statistics]] [[Statistics]]
deps = ["LinearAlgebra", "SparseArrays"] deps = ["LinearAlgebra", "SparseArrays"]
@ -349,6 +344,10 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
deps = ["Libdl"] deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a" uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
[[libblastrampoline_jll]]
deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
[[nghttp2_jll]] [[nghttp2_jll]]
deps = ["Artifacts", "Libdl"] deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"