from pyerrors.input import json as pj import os import datalad.api as dl import sqlite3 def write_measurement(path, ensemble, measurement, uuid, code, parameters, parameter_file): """ Write a measurement to the backlog. If the file for the measurement already exists, update the measurement. Parameters ---------- path: str The path to the backlogger folder. ensemble: str The ensemble of the measurement. measurement: dict Measurements to be captured in the backlogging system. uuid: str The uuid of the project. """ for corr in measurement.keys(): file = path + "/archive/" + ensemble + "/" + corr + '/' + uuid + '.json.gz' if not os.path.exists(path + "/archive/" + ensemble + "/" + corr): os.makedirs(path + "/archive/" + ensemble + "/" + corr) conn = sqlite3.connect(path + '/backlogger.db') c = conn.cursor() if os.path.exists(file): dl.unlock(file, dataset=path) known_meas = pj.load_json_dict(file) for key in measurement[corr].keys(): known_meas[key] = measurement[corr][key] else: known_meas = measurement[corr] pj.dump_dict_to_json(measurement[corr], file) for subkey in measurement[corr].keys(): meas_path = file + "::" + subkey if not os.path.exists(file): c.execute("INSERT INTO backlogs (name, ensemble, code, path, project, parameters, parameter_file, created_at, updated_at) VALUES (?, ?, ?, ?, ?, ?, ?, datetime('now'), datetime('now'))", (corr, ensemble, code, meas_path, uuid, parameters, parameter_file)) else: c.execute("UPDATE backlogs SET updated_at=datetime('now') WHERE path=?", (file,)) conn.commit() conn.close() dl.save([path + '/backlogger.db', file], message="Add measurement to database", dataset=path)