jkuhl/corrlib
1
0
Fork 0
Code Issues 11 Pull requests Releases Packages Activity Actions

fix time tests
Some checks failed
Mypy / mypy (push) Failing after 1m11s
Details
Pytest / pytest (3.12) (push) Successful in 1m19s
Details
Pytest / pytest (3.13) (push) Successful in 1m12s
Details
Pytest / pytest (3.14) (push) Successful in 1m14s
Details
Ruff / ruff (push) Successful in 1m1s
Details

Browse source
This commit is contained in:
Justus Kuhlmann 2026-04-15 11:24:25 +02:00
commit dc424c3e18
Signed by: jkuhl
GPG key ID: 00ED992DD79B85A6
1 changed files with 25 additions and 7 deletions
Download patch file Download diff file Expand all files Collapse all files

32
tests/find_test.py
View file

@ -5,6 +5,7 @@ import corrlib.initialization as cinit
import pytest import pytest
import pandas as pd import pandas as pd
import datalad.api as dl import datalad.api as dl
import datetime as dt
def make_sql(path: Path) -> Path: def make_sql(path: Path) -> Path:
@ -57,18 +58,20 @@ def test_find_lookup_by_id(tmp_path: Path) -> None:
def test_time_filter() -> None: def test_time_filter() -> None:
record_A = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in", record_A = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf0", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2025-03-26 12:55:18.229966', '2025-03-26 12:55:18.229966'] # only created '2025-03-26 12:55:18.229966', '2025-03-26 12:55:18.229966'] # only created
record_B = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in", record_B = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf1", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2025-03-26 12:55:18.229966', '2025-04-26 12:55:18.229966'] # created and updated '2025-03-26 12:55:18.229966', '2025-04-26 12:55:18.229966'] # created and updated
record_C = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in", record_C = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf2", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2026-03-26 12:55:18.229966', '2026-05-26 12:55:18.229966'] # created and updated later '2026-03-26 12:55:18.229966', '2026-04-14 12:55:18.229966'] # created and updated later
record_D = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in", record_D = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf3", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2026-03-26 12:55:18.229966', '2026-03-27 12:55:18.229966'] '2026-03-26 12:55:18.229966', '2026-03-27 12:55:18.229966']
record_E = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in", record_E = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf4", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2024-03-26 12:55:18.229966', '2024-03-26 12:55:18.229966'] # only created, earlier '2024-03-26 12:55:18.229966', '2024-03-26 12:55:18.229966'] # only created, earlier
record_F = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in", record_F = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf5", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2026-03-26 12:55:18.229966', '2024-03-26 12:55:18.229966'] # this is invalid... '2026-03-26 12:55:18.229966', '2024-03-26 12:55:18.229966'] # this is invalid...
record_G = ["f_A", "ensA", "sfcf", "archive/SF_A/f_A/Project_A.json.gz::asdfasdfasdf2", "SF_A", '{"par_A": 5.0, "par_B": 5.0}', "projects/SF_A/input.in",
'2026-03-26 12:55:18.229966', str(dt.datetime.now() + dt.timedelta(days=2, hours=3, minutes=5, seconds=30))] # created and updated later
data = [record_A, record_B, record_C, record_D, record_E] data = [record_A, record_B, record_C, record_D, record_E]
cols = ["name", cols = ["name",
@ -141,6 +144,21 @@ def test_time_filter() -> None:
with pytest.raises(ValueError): with pytest.raises(ValueError):
results = find._time_filter(df, created_before='2023-03-26 12:55:18.229966') results = find._time_filter(df, created_before='2023-03-26 12:55:18.229966')
data = [record_A, record_B, record_C, record_D, record_G]
cols = ["name",
"ensemble",
"code",
"path",
"project",
"parameters",
"parameter_file",
"created_at",
"updated_at"]
df = pd.DataFrame(data,columns=cols)
with pytest.raises(ValueError):
results = find._time_filter(df, created_before='2023-03-26 12:55:18.229966')
def test_db_lookup(tmp_path: Path) -> None: def test_db_lookup(tmp_path: Path) -> None:
db = make_sql(tmp_path) db = make_sql(tmp_path)