add support for simple replacements in form of constants and replace variables

corrlib/toml.py

@@ -17,10 +17,37 @@ import datalad.api as dl
 import os
 from .input.implementations import codes as known_codes
 
+def replace_string(string: str, name: str, val: str):
+    if '{' + name + '}' in string:
+        n = string.replace('{' + name + '}', val)
+        return n
+    else:
+        return string
+
+def replace_in_meas(measurements: dict, vars: dict[str, str]):
+    # replace global variables
+    for name, value in vars.items():
+        for m in measurements.keys():
+            for key in measurements[m].keys():
+                measurements[m][key] = replace_string(measurements[m][key], name, value)
+    # replace ensemble name
+    for m in measurements.keys():
+            for key in measurements[m].keys():
+                if not key == 'ensemble':
+                    measurements[m][key] = replace_string(measurements[m][key], 'ensemble', measurements[m]['ensemble'])
+    return measurements
+
+def fill_cons(measurements, constants):
+    for m in measurements.keys():
+        for name, val in constants.items():
+            if name not in measurements[m].keys():
+                measurements[m][name] = val
+    return measurements
+
 
 def check_project_data(d: dict) -> None:
-    if 'project' not in d.keys() or 'measurements' not in d.keys() or len(list(d.keys())) > 2:
-        raise ValueError('There should only be two key on the top level, "project" and "measurements"!')
+    if 'project' not in d.keys() or 'measurements' not in d.keys() or len(list(d.keys())) > 4:
+        raise ValueError('There should only be maximally be four keys on the top level, "project" and "measurements" are mandatory, "contants" is optional!')
     project_data = d['project']
     if 'url' not in project_data.keys():
         raise ValueError('project.url is missing!')
@@ -68,7 +95,11 @@ def import_toml(path: str, file: str, copy_file: bool=True) -> None:
     project: dict = toml_dict['project']
     if project['code'] not in known_codes:
         raise ValueError('Code' + project['code'] + 'has no import implementation!')
+    constants: dict = toml_dict['constants']
     measurements: dict = toml_dict['measurements']
+    measurements = fill_cons(measurements, constants)
+    measurements = replace_in_meas(measurements, toml_dict['replace'] if 'replace' in toml_dict else {})
+    print(measurements)
     check_measurement_data(measurements, project['code'])
     aliases = project.get('aliases', None)
     uuid = project.get('uuid', None)
@@ -90,6 +121,7 @@ def import_toml(path: str, file: str, copy_file: bool=True) -> None:
             else:
                 measurement = sfcf.read_data(path, uuid, md['path'], md['prefix'], param,
                                             version=md['version'], cfg_seperator=md['cfg_seperator'], sep='/')
+
             print(mname + " imported.")
         elif project['code'] == 'openQCD':
             if md['measurement'] == 'ms1':